Personal tools

FFCP PHASE1:Mm9::chr11:61770282..61770293,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=432572|HGNC=|MCL_coexpression_id=704|UniProt=Q5SXY1|association_with_transcript=1bp_to_ENSMUST00000049836_5end|description=CAGE_peak_3_at_Specc1_5end|id=chr11:61770282..61770293,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.02e-10!71;UBERON:0003075!1.02e-10!71;UBERON:0007284!1.02e-10!71;UBERON:0000955!6.91e-10!50;UBERON:0006238!6.91e-10!50;UBERON:0001049!1.96e-09!52;UBERON:0005068!1.96e-09!52;UBERON:0006241!1.96e-09!52;UBERON:0007135!1.96e-09!52;UBERON:0002616!2.26e-09!49;UBERON:0000033!1.07e-08!63;UBERON:0001017!2.99e-08!73;UBERON:0005743!2.99e-08!73;UBERON:0000073!1.26e-07!75;UBERON:0001016!1.26e-07!75;UBERON:0002021!2.40e-07!10;UBERON:0000411!2.40e-07!10;UBERON:0001950!2.40e-07!10;UBERON:0002020!2.53e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.24e-16,54;UBERON:0000955,2.65e-16,47;UBERON:0006238,2.65e-16,47;UBERON:0002616,3.08e-15,46;UBERON:0002021,2.07e-14,10;UBERON:0000411,2.07e-14,10;UBERON:0001950,2.07e-14,10;UBERON:0001049,3.06e-14,52;UBERON:0005068,3.06e-14,52;UBERON:0006241,3.06e-14,52;UBERON:0007135,3.06e-14,52;UBERON:0001017,9.20e-13,73;UBERON:0001016,3.17e-12,75;UBERON:0003528,2.24e-11,29;UBERON:0002791,2.24e-11,29;UBERON:0001893,2.24e-11,29;UBERON:0003080,2.73e-11,40;UBERON:0002346,2.18e-10,64;UBERON:0003075,2.18e-10,64;UBERON:0007284,2.18e-10,64;UBERON:0002780,3.97e-10,39;UBERON:0001890,3.97e-10,39;UBERON:0006240,3.97e-10,39;UBERON:0002619,1.68e-09,17;UBERON:0011216,3.10e-09,194;UBERON:0002020,3.93e-09,34;UBERON:0000025,5.75e-09,114;UBERON:0000956,5.92e-09,21;UBERON:0001869,5.92e-09,21;UBERON:0000203,5.92e-09,21;UBERON:0010371,2.33e-08,73;UBERON:0003056,2.39e-08,49;UBERON:0004121,3.78e-08,95;UBERON:0000924,3.78e-08,95;UBERON:0006601,3.78e-08,95;UBERON:0002950,6.17e-08,4;UBERON:0001891,6.17e-08,4;UBERON:0009616,6.17e-08,4;UBERON:0010286,6.17e-08,4;UBERON:0004111,7.48e-08,122;UBERON:0002106,1.60e-07,6;UBERON:0004457,1.60e-07,6;UBERON:0000042,1.60e-07,6;UBERON:0004854,1.60e-07,6;UBERON:0009034,1.60e-07,6;UBERON:0002095,1.60e-07,6;UBERON:0004782,1.60e-07,6;UBERON:0003281,1.60e-07,6;UBERON:0009664,1.60e-07,6;UBERON:0002296,1.60e-07,6;UBERON:0005602,1.60e-07,6;UBERON:0001179,1.60e-07,6;UBERON:0006293,1.60e-07,6|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,4.33042690360362,5.87178275430495,6.99561878128147,0,0,0.84877930359606,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0.635030673459631,1.23012957516914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0.285650984403804,0.220868540951614,0,0,0,5.50579404996943,5.74593021383345,6.29786786350598,0.131886287730194,0.182975287204819,0,3.62937898701795,3.93933827022176,5.19514042441154,0.589257170947335,0.854230084794618,0.186399445825301,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.445326417194474,0.346970653532272,0.608930956624282,0.691846491768175,0.150722640552623,0.352766121407114,0,0,0.144599356919912,1.76922110389975,1.29413479957927,1.54589062922275,3.39412677194655,0,12.0040126774734,8.79676168616511,0,0,0,0,10.3355541189328,5.03250663100489,0,6.25767552692195,3.58001640262463,6.2336413367868,5.67844420737152,0.305518091550949,0.870848794270651,0,0.631325567659422,0.130120442962704,0,0,0.150704817835715,0.136072998302656,0,0,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0.292399974850665,0.219550115291051,0,4.83666881697493,0.411618449517138,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.210407459670956,0.189709611372772,0.295220295959204,0.31399745568275,0.246794327843601,0,2.8363667971736,2.75182593158484,4.49724224769707,4.46292267054706,4.58236603529592,2.5462585178142,3.45235364940973,2.91843408195064,1.37280706594041,0,0.744281895337007,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0,0.144649058581512,0,0,0,0,7.86697890940181,4.57125577709592,0.163934945376675,0,0.631016438832513,0.390438744296638,0.430846795465598,0,0,0,0,0,0,3.21321316421807,0.141940085208269,0.534196811001766,0.488660878060728,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0,0.129358683782755,0,0,0,0,0,0,0,0.220528398054962,0,0.161464426695906,0,0,0,0,5.37733375830478,2.9048049735635,0.206386867963223,1.48155621895769,7.53473828018764,6.28793447516716,4.80434163733698,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0.165306911450672,0,0,0,0.56369293868419,0,0,0.583353565032143,0.516639293910924,0.337912250981556,0,0.2604087696879,0.524296722128554,0.724752362478018,0.576060012515731,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0.680191150845634,0,0,0,0,0,0,0,0,1.6942555278512,1.38097570952153,1.14579102687879,2.749650917499,2.05524755931193,1.5107877947794,2.02506750069542,3.60256962579376,4.07828168085784,7.24864436452548,0.103787347584177,0,0.170733605754134,0.486213434136588,0.838452650511929,0.367687016900028,0.44449345560323,0.206035057238894,0.64183841918363,0.505394423527595,0.50695859978048,0.943131706930381,0.280924522409647,0.192075457214608,0.459483751644906,0.952587382566147,0.347652977834566,0.38581844092741,0.824171801606613,0,0,0.532427418478012,0,0.436039249896986,0.470546902076653,0.169229215783353,0.548783918618318,0.263069711437843,0.135804113845862,0,0.711810108745045,0.197008964751127,0,0.154936841185966,0.385813221962283,0,0.233931608445408,0.214871054048298,0,0,1.15933917810211|short_description=p3@Specc1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=432572
|HGNC=
|MCL_coexpression_id=704
|TSSclassifier=NA
|UniProt=Q5SXY1
|association_with_transcript=1bp_to_ENSMUST00000049836_5end
|cluster_id=chr11:61770282..61770293,+
|description=CAGE_peak_3_at_Specc1_5end
|id=chr11:61770282..61770293,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.02e-10!71;UBERON:0003075!1.02e-10!71;UBERON:0007284!1.02e-10!71;UBERON:0000955!6.91e-10!50;UBERON:0006238!6.91e-10!50;UBERON:0001049!1.96e-09!52;UBERON:0005068!1.96e-09!52;UBERON:0006241!1.96e-09!52;UBERON:0007135!1.96e-09!52;UBERON:0002616!2.26e-09!49;UBERON:0000033!1.07e-08!63;UBERON:0001017!2.99e-08!73;UBERON:0005743!2.99e-08!73;UBERON:0000073!1.26e-07!75;UBERON:0001016!1.26e-07!75;UBERON:0002021!2.40e-07!10;UBERON:0000411!2.40e-07!10;UBERON:0001950!2.40e-07!10;UBERON:0002020!2.53e-07!34
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.24e-16,54;UBERON:0000955,2.65e-16,47;UBERON:0006238,2.65e-16,47;UBERON:0002616,3.08e-15,46;UBERON:0002021,2.07e-14,10;UBERON:0000411,2.07e-14,10;UBERON:0001950,2.07e-14,10;UBERON:0001049,3.06e-14,52;UBERON:0005068,3.06e-14,52;UBERON:0006241,3.06e-14,52;UBERON:0007135,3.06e-14,52;UBERON:0001017,9.20e-13,73;UBERON:0001016,3.17e-12,75;UBERON:0003528,2.24e-11,29;UBERON:0002791,2.24e-11,29;UBERON:0001893,2.24e-11,29;UBERON:0003080,2.73e-11,40;UBERON:0002346,2.18e-10,64;UBERON:0003075,2.18e-10,64;UBERON:0007284,2.18e-10,64;UBERON:0002780,3.97e-10,39;UBERON:0001890,3.97e-10,39;UBERON:0006240,3.97e-10,39;UBERON:0002619,1.68e-09,17;UBERON:0011216,3.10e-09,194;UBERON:0002020,3.93e-09,34;UBERON:0000025,5.75e-09,114;UBERON:0000956,5.92e-09,21;UBERON:0001869,5.92e-09,21;UBERON:0000203,5.92e-09,21;UBERON:0010371,2.33e-08,73;UBERON:0003056,2.39e-08,49;UBERON:0004121,3.78e-08,95;UBERON:0000924,3.78e-08,95;UBERON:0006601,3.78e-08,95;UBERON:0002950,6.17e-08,4;UBERON:0001891,6.17e-08,4;UBERON:0009616,6.17e-08,4;UBERON:0010286,6.17e-08,4;UBERON:0004111,7.48e-08,122;UBERON:0002106,1.60e-07,6;UBERON:0004457,1.60e-07,6;UBERON:0000042,1.60e-07,6;UBERON:0004854,1.60e-07,6;UBERON:0009034,1.60e-07,6;UBERON:0002095,1.60e-07,6;UBERON:0004782,1.60e-07,6;UBERON:0003281,1.60e-07,6;UBERON:0009664,1.60e-07,6;UBERON:0002296,1.60e-07,6;UBERON:0005602,1.60e-07,6;UBERON:0001179,1.60e-07,6;UBERON:0006293,1.60e-07,6
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,4.33042690360362,5.87178275430495,6.99561878128147,0,0,0.84877930359606,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0.635030673459631,1.23012957516914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0.285650984403804,0.220868540951614,0,0,0,5.50579404996943,5.74593021383345,6.29786786350598,0.131886287730194,0.182975287204819,0,3.62937898701795,3.93933827022176,5.19514042441154,0.589257170947335,0.854230084794618,0.186399445825301,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.445326417194474,0.346970653532272,0.608930956624282,0.691846491768175,0.150722640552623,0.352766121407114,0,0,0.144599356919912,1.76922110389975,1.29413479957927,1.54589062922275,3.39412677194655,0,12.0040126774734,8.79676168616511,0,0,0,0,10.3355541189328,5.03250663100489,0,6.25767552692195,3.58001640262463,6.2336413367868,5.67844420737152,0.305518091550949,0.870848794270651,0,0.631325567659422,0.130120442962704,0,0,0.150704817835715,0.136072998302656,0,0,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0.292399974850665,0.219550115291051,0,4.83666881697493,0.411618449517138,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.210407459670956,0.189709611372772,0.295220295959204,0.31399745568275,0.246794327843601,0,2.8363667971736,2.75182593158484,4.49724224769707,4.46292267054706,4.58236603529592,2.5462585178142,3.45235364940973,2.91843408195064,1.37280706594041,0,0.744281895337007,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0,0.144649058581512,0,0,0,0,7.86697890940181,4.57125577709592,0.163934945376675,0,0.631016438832513,0.390438744296638,0.430846795465598,0,0,0,0,0,0,3.21321316421807,0.141940085208269,0.534196811001766,0.488660878060728,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0,0.129358683782755,0,0,0,0,0,0,0,0.220528398054962,0,0.161464426695906,0,0,0,0,5.37733375830478,2.9048049735635,0.206386867963223,1.48155621895769,7.53473828018764,6.28793447516716,4.80434163733698,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0.165306911450672,0,0,0,0.56369293868419,0,0,0.583353565032143,0.516639293910924,0.337912250981556,0,0.2604087696879,0.524296722128554,0.724752362478018,0.576060012515731,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0.680191150845634,0,0,0,0,0,0,0,0,1.6942555278512,1.38097570952153,1.14579102687879,2.749650917499,2.05524755931193,1.5107877947794,2.02506750069542,3.60256962579376,4.07828168085784,7.24864436452548,0.103787347584177,0,0.170733605754134,0.486213434136588,0.838452650511929,0.367687016900028,0.44449345560323,0.206035057238894,0.64183841918363,0.505394423527595,0.50695859978048,0.943131706930381,0.280924522409647,0.192075457214608,0.459483751644906,0.952587382566147,0.347652977834566,0.38581844092741,0.824171801606613,0,0,0.532427418478012,0,0.436039249896986,0.470546902076653,0.169229215783353,0.548783918618318,0.263069711437843,0.135804113845862,0,0.711810108745045,0.197008964751127,0,0.154936841185966,0.385813221962283,0,0.233931608445408,0.214871054048298,0,0,1.15933917810211
|short_description=p3@Specc1
}}

Latest revision as of 20:49, 1 October 2015

Short description:p3@Specc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Specc1_5end
Coexpression cluster:MCL_coexpression_mm9:704
Association with transcript: 1bp_to_ENSMUST00000049836_5end
EntrezGene:Specc1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Specc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.87
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.75
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.20
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B212.00
cerebellum, neonate N30.CNhs11135.1395-42I28.80
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.34
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D56.26
cortex, neonate N30.CNhs11107.1392-42F23.58
diencephalon, adult.CNhs10482.20-12F26.23
diencephalon, neonate N30.CNhs11201.1388-42B25.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E84.84
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F82.84
liver, embryo E13.CNhs10524.378-3H62.75
liver, embryo E14.CNhs10594.409-16E14.50
liver, embryo E15.CNhs10520.433-16D74.46
liver, embryo E16.CNhs10523.462-17F54.58
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F42.92
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C27.87
medulla oblongata, neonate N30.CNhs11200.1396-42A34.57
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C95.38
spleen, adult.CNhs10465.25-2G22.90
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D17.53
spleen, neonate N20.CNhs11112.824-19H16.29
spleen, neonate N25.CNhs11099.1354-25G34.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.75
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.24e-1654
brain2.65e-1647
future brain2.65e-1647
regional part of brain3.08e-1546
occipital lobe2.07e-1410
visual cortex2.07e-1410
neocortex2.07e-1410
neural tube3.06e-1452
neural rod3.06e-1452
future spinal cord3.06e-1452
neural keel3.06e-1452
central nervous system9.20e-1373
nervous system3.17e-1275
brain grey matter2.24e-1129
regional part of telencephalon2.24e-1129
telencephalon2.24e-1129
anterior neural tube2.73e-1140
neurectoderm2.18e-1064
neural plate2.18e-1064
presumptive neural plate2.18e-1064
regional part of forebrain3.97e-1039
forebrain3.97e-1039
future forebrain3.97e-1039
regional part of cerebral cortex1.68e-0917
organ system subdivision3.10e-09194
gray matter3.93e-0934
tube5.75e-09114
cerebral cortex5.92e-0921
cerebral hemisphere5.92e-0921
pallium5.92e-0921
ecto-epithelium2.33e-0873
pre-chordal neural plate2.39e-0849
ectoderm-derived structure3.78e-0895
ectoderm3.78e-0895
presumptive ectoderm3.78e-0895
regional part of midbrain6.17e-084
midbrain6.17e-084
presumptive midbrain6.17e-084
midbrain neural tube6.17e-084
anatomical conduit7.48e-08122
spleen1.60e-076
cavity lining1.60e-076
serous membrane1.60e-076
gastrointestinal system mesentery1.60e-076
stomach region1.60e-076
mesentery1.60e-076
gastrointestinal system serosa1.60e-076
mesentery of stomach1.60e-076
gut mesentery1.60e-076
dorsal mesentery1.60e-076
dorsal mesogastrium1.60e-076
peritoneal cavity1.60e-076
spleen primordium1.60e-076
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:61770282..61770293,%2B&oldid=4321593"