FFCP PHASE1:Hg19::chr2:95691417..95691424,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4118 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6817 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000489399_5end | |||
|cluster_id=chr2:95691417..95691424,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_3_at_MAL_5end | |||
|id=chr2:95691417..95691424,+ | |||
|ontology_enrichment_celltype=CL:0000084!1.22e-16!25;CL:0000827!1.22e-16!25;CL:0000791!3.30e-16!18;CL:0000789!3.30e-16!18;CL:0002420!3.30e-16!18;CL:0002419!3.30e-16!18;CL:0000790!3.30e-16!18;CL:0000625!3.22e-11!11;CL:0000838!1.52e-09!52;CL:0000542!3.47e-09!53;CL:0000051!3.47e-09!53;CL:0000624!5.27e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.55e-23;18!CL:0000789;3.55e-23;18!CL:0002419;3.55e-23;18!CL:0000084;3.13e-19;25!CL:0000625;1.26e-15;11!CL:0000624;6.27e-11;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.89e-23,18;CL:0000789,3.89e-23,18;CL:0002420,3.89e-23,18;CL:0002419,3.89e-23,18;CL:0000790,3.89e-23,18;CL:0000084,3.09e-19,25;CL:0000827,3.09e-19,25;CL:0000625,1.37e-15,11;CL:0000624,6.32e-11,6;CL:0000838,3.69e-10,52;CL:0000542,7.67e-10,53;CL:0000051,7.67e-10,53 | |||
|ontology_enrichment_development_v019=CL:0000790;3.55e-23;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.21e-47!115;UBERON:0001049!3.62e-16!57;UBERON:0005068!3.62e-16!57;UBERON:0006241!3.62e-16!57;UBERON:0007135!3.62e-16!57;UBERON:0002780!8.44e-13!41;UBERON:0001890!8.44e-13!41;UBERON:0006240!8.44e-13!41;UBERON:0000178!1.30e-12!15;UBERON:0000179!1.30e-12!15;UBERON:0000463!1.30e-12!15;UBERON:0002616!2.85e-12!59;UBERON:0003080!2.85e-12!42;UBERON:0001017!4.43e-11!82;UBERON:0000955!5.84e-11!69;UBERON:0006238!5.84e-11!69;UBERON:0001893!7.17e-11!34;UBERON:0003075!8.92e-11!86;UBERON:0007284!8.92e-11!86;UBERON:0005743!1.01e-10!86;UBERON:0002020!1.17e-10!34;UBERON:0003528!1.17e-10!34;UBERON:0002791!2.64e-10!33;UBERON:0002346!1.05e-09!90;UBERON:0001869!1.34e-09!32;UBERON:0000073!3.29e-09!94;UBERON:0001016!3.29e-09!94;UBERON:0003056!1.43e-07!61;UBERON:0002619!2.92e-07!22;UBERON:0002308!3.14e-07!9;UBERON:0000125!3.14e-07!9;UBERON:0002420!3.19e-07!9;UBERON:0007245!3.19e-07!9;UBERON:0010009!3.19e-07!9;UBERON:0010011!3.19e-07!9;UBERON:0000454!3.19e-07!9;UBERON:0000153!7.95e-07!129;UBERON:0007811!7.95e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.55e-14;15!UBERON:0000179;8.55e-14;15!UBERON:0000463;8.55e-14;15!UBERON:0001893;4.17e-10;34!UBERON:0002780;5.61e-10;41!UBERON:0001890;5.61e-10;41!UBERON:0007023;5.13e-09;114!UBERON:0001869;8.65e-09;32!UBERON:0002791;8.71e-09;32!UBERON:0003528;1.36e-08;34!UBERON:0002020;1.36e-08;34!UBERON:0002390;4.85e-08;32!UBERON:0000073;6.79e-08;53!UBERON:0002616;6.79e-08;53!UBERON:0009663;7.79e-08;7!UBERON:0000125;9.47e-08;9!UBERON:0002308;9.47e-08;9!UBERON:0002420;1.41e-07;9!UBERON:0007245;1.41e-07;9!UBERON:0010009;1.41e-07;9!UBERON:0010011;1.41e-07;9!UBERON:0000454;1.41e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.16e-29,114;UBERON:0000178,6.54e-14,15;UBERON:0000179,6.54e-14,15;UBERON:0000463,6.54e-14,15;UBERON:0002780,7.42e-14,41;UBERON:0001890,7.42e-14,41;UBERON:0003080,7.42e-14,41;UBERON:0006240,7.42e-14,41;UBERON:0001049,1.63e-13,56;UBERON:0005068,1.63e-13,56;UBERON:0006241,1.63e-13,56;UBERON:0007135,1.63e-13,56;UBERON:0000073,2.05e-13,53;UBERON:0002616,2.05e-13,53;UBERON:0001893,7.85e-12,34;UBERON:0000955,3.50e-11,68;UBERON:0006238,3.50e-11,68;UBERON:0003528,1.69e-10,34;UBERON:0002020,1.69e-10,34;UBERON:0001869,3.78e-10,32;UBERON:0002791,3.81e-10,32;UBERON:0001017,1.11e-09,81;UBERON:0003075,4.53e-09,82;UBERON:0007284,4.53e-09,82;UBERON:0003056,4.90e-09,61;UBERON:0001016,1.08e-08,89;UBERON:0002346,2.82e-08,86;UBERON:0009663,4.31e-08,7;UBERON:0000125,5.55e-08,9;UBERON:0002308,5.55e-08,9;UBERON:0002420,6.77e-08,9;UBERON:0007245,6.77e-08,9;UBERON:0010009,6.77e-08,9;UBERON:0010011,6.77e-08,9;UBERON:0000454,6.77e-08,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0.157421562627358,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0,0,1.20326668482085,2.60413044859022,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0,0,0.426224750532694,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0.263384084775077,15.5400718389928,16.8994627982141,19.1209394069544,11.7030546773475,16.2961133316795,21.7785990637977,19.4826728407911,9.13565746458423,11.7842362989935,13.7351014641845,10.5613506868356,15.755232326258,10.1446291096705,23.0213066445147,14.9229009604358,17.6779882298382,14.828656316206,17.1226129977416,19.8617495229456,14.616905207986,10.7301738208538,12.7142154828573,7.59059076058509,5.41561204350964,5.20866763085135,3.8018081777935,8.2816315492775,8.70308955850045,6.24653632761729,4.2619905367923,3.28451198768419,3.02410114837099,1.60464117470104,6.08262496307756,0,0,0,0,0,0,0,0,0,0,0,1.37528029272598,0,0.370784442784429,0,0,0.132957960518865,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6487785964879,0,0,0,0,0,0,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507983154337352,0.381988425558278,3.51652341630141,1.71072446022705,10.796886733849,9.61097785100536,14.8629744967901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95546140302891,3.23441362289276,4.36366323351144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72182447021197,6.03999762292127,3.62873696531711,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60959690325929,1.00119938235739,0.784349769176855,0,0.211103257785751,0,0,0,0,0,2.00675909541941,10.1950509218015,14.1282921517883,3.80587083027703,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,3.55213326462519,3.0585488285695,2.84823593587081,4.04994018278241,4.93634727703433,2.59389324477087,1.62009431171434,3.96562588147135,0,0,0,0,0,2.70339004723974,0.637705090915289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0.111443384277478,0,7.40107902686839,0.593929361665277,14.4365529986639,0.994147647766298,1.96937182974718,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0.394573622547734,2.3948309234694,0,2.90799823828566,2.31920245404628,1.99613798001194,0,0,0,0,0,0,0.344743373241465,0,0,2.65722415744152,1.5677537021303,0,0.995213339381022,0.886642856860642,1.31631238292384,0,1.95193241990045,0.923403102045565,0,0,0,0.325942115766024,2.55200927785536,0.0915975934018623,0,0,0,0,0,0,0,0,0.317873157960757,1.05499032264014,0,0,0,0,0.353830258013357,0,0.296521128680622,0.86494757262552,1.67075119208729,4.31367251076333,0,3.27970224015475,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,3.81831424337288,0,0,0.17472666824203,0,0,0,0,4.26751672549045,0,0.451961481561065,0,0,1.26621591911757,0.977756913674015,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0,0,0,1.80126086612937,1.77976992559591,0,0,0.525774708558629,0.837847203816763,1.83328339209347,0,1.39775300349294,2.57535628881943,1.11585728720936,0.335917362433631,0,0,0,0,0,0,0,0.795229689809303,2.31545790389679,0,0.137539436597234,0,0,0,1.33649024647654,0,2.67939404817274,3.72427575758487,0,0,0,4.2881719582402,3.97255182219259,0,0,0,0,0,0.164185041498678,0,0.226624183040251,0,0,2.58565912723101,0.79339561045614,0,2.81926008926669,0.213574825135389,0.157204305099666,1.24271716604159,4.46549419630756,0,0,0,0,0,0,0,0,0,1.58634144372552,1.251909307065,2.29363678276028,0.887432412294818,2.54595252059672,0,0,0,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7973596699725,0,0,0.327130788511688,0,0,0,7.19954625077748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,1.28458450192919,0,0.319267718114302,2.05116364240755,0,1.52145955421279,1.29180516505481,7.13847101295772,0,0,0,0,0,0,0.397832444232549,0.150420656698515,0,0,0,0,0,1.75597720007826,2.34323429584154,0.620060389503552,1.9024743058172,0,0.548257766857182,0,0,0,2.67850917939143,0.336283722218824,0,0,0.620916591138472,0,0,1.63127359144396,1.77586488619693,0,0.333694205676207,1.02041020705668,1.57115589916002,0,0,0,0.47775168788705,2.85906176706625,0,0,0,0,0,0,0,0.860454717640555,0,0,0,6.18588545068935,1.24082554265728,0,0,0,0,0.647428837187895,0,1.1598144313382,0.485710993059139,0,0,0.594600453887843,0,0,0.452888530700021,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,5.10402014498858,0.891139200981258,0.8453114551668,0,1.12780701575824,0.322289439867886,2.39858774219829,0,0,0,2.19100916473955,0.917458566809082,1.7200749978174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| |||
|short_description=p3@MAL | |||
}} |
Latest revision as of 23:07, 18 September 2015
Short description: | p3@MAL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MAL_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000489399_5end |
EntrezGene: | MAL |
HGNC: | 6817 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.89e-23 | 18 |
alpha-beta T cell | 3.89e-23 | 18 |
immature T cell | 3.89e-23 | 18 |
mature T cell | 3.89e-23 | 18 |
immature alpha-beta T cell | 3.89e-23 | 18 |
T cell | 3.09e-19 | 25 |
pro-T cell | 3.09e-19 | 25 |
CD8-positive, alpha-beta T cell | 1.37e-15 | 11 |
CD4-positive, alpha-beta T cell | 6.32e-11 | 6 |
lymphoid lineage restricted progenitor cell | 3.69e-10 | 52 |
lymphocyte | 7.67e-10 | 53 |
common lymphoid progenitor | 7.67e-10 | 53 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.16e-29 | 114 |
blood | 6.54e-14 | 15 |
haemolymphatic fluid | 6.54e-14 | 15 |
organism substance | 6.54e-14 | 15 |
regional part of forebrain | 7.42e-14 | 41 |
forebrain | 7.42e-14 | 41 |
anterior neural tube | 7.42e-14 | 41 |
future forebrain | 7.42e-14 | 41 |
neural tube | 1.63e-13 | 56 |
neural rod | 1.63e-13 | 56 |
future spinal cord | 1.63e-13 | 56 |
neural keel | 1.63e-13 | 56 |
regional part of nervous system | 2.05e-13 | 53 |
regional part of brain | 2.05e-13 | 53 |
telencephalon | 7.85e-12 | 34 |
brain | 3.50e-11 | 68 |
future brain | 3.50e-11 | 68 |
brain grey matter | 1.69e-10 | 34 |
gray matter | 1.69e-10 | 34 |
cerebral hemisphere | 3.78e-10 | 32 |
regional part of telencephalon | 3.81e-10 | 32 |
central nervous system | 1.11e-09 | 81 |
neural plate | 4.53e-09 | 82 |
presumptive neural plate | 4.53e-09 | 82 |
pre-chordal neural plate | 4.90e-09 | 61 |
nervous system | 1.08e-08 | 89 |
neurectoderm | 2.82e-08 | 86 |
telencephalic nucleus | 4.31e-08 | 7 |
neural nucleus | 5.55e-08 | 9 |
nucleus of brain | 5.55e-08 | 9 |
basal ganglion | 6.77e-08 | 9 |
nuclear complex of neuraxis | 6.77e-08 | 9 |
aggregate regional part of brain | 6.77e-08 | 9 |
collection of basal ganglia | 6.77e-08 | 9 |
cerebral subcortex | 6.77e-08 | 9 |