FFCP PHASE1:Hg19::chr2:86669209..86669241,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55818 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20815 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-205bp_to_ENST00000498528_5end | |||
|cluster_id=chr2:86669209..86669241,+ | |||
|coexpression_cluster_id=C1212 | |||
|description=CAGE_peak_3_at_KDM3A_5end | |||
|id=chr2:86669209..86669241,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.18e-18!140;CL:0000037!2.15e-13!172;CL:0000566!2.15e-13!172;CL:0002031!4.44e-12!124;CL:0002087!5.76e-12!119;CL:0002032!1.03e-11!165;CL:0000837!1.03e-11!165;CL:0000988!1.86e-11!182;CL:0000791!1.76e-09!18;CL:0000789!1.76e-09!18;CL:0002420!1.76e-09!18;CL:0002419!1.76e-09!18;CL:0000790!1.76e-09!18;CL:0000084!6.45e-09!25;CL:0000827!6.45e-09!25;CL:0000838!2.49e-08!52;CL:0000542!3.59e-08!53;CL:0000051!3.59e-08!53;CL:0002057!1.77e-07!42;CL:0000766!1.91e-07!76;CL:0000094!8.60e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.04e-18;18!CL:0000789;1.04e-18;18!CL:0002419;1.04e-18;18!CL:0000084;2.82e-15;25!CL:0000094;6.13e-13;8!CL:0000625;9.82e-12;11!CL:0000624;3.12e-10;6!CL:0000081;7.82e-09;11!CL:0000542;5.90e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.36e-22,136;CL:0000791,2.01e-19,18;CL:0000789,2.01e-19,18;CL:0002420,2.01e-19,18;CL:0002419,2.01e-19,18;CL:0000790,2.01e-19,18;CL:0000084,4.99e-16,25;CL:0000827,4.99e-16,25;CL:0000037,3.30e-15,168;CL:0000838,8.20e-15,52;CL:0000542,2.28e-14,53;CL:0000051,2.28e-14,53;CL:0000988,1.45e-13,177;CL:0000094,6.29e-13,8;CL:0002087,1.19e-12,115;CL:0002032,1.68e-12,161;CL:0000837,1.68e-12,161;CL:0000625,2.40e-12,11;CL:0002031,3.60e-12,120;CL:0000624,2.40e-10,6;CL:0000081,7.94e-09,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.04e-18;18!CL:0000051;5.90e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.44e-14!115;UBERON:0001049!1.09e-08!57;UBERON:0005068!1.09e-08!57;UBERON:0006241!1.09e-08!57;UBERON:0007135!1.09e-08!57;UBERON:0002390!2.35e-07!102;UBERON:0003061!2.35e-07!102;UBERON:0003080!5.58e-07!42;UBERON:0002780!8.83e-07!41;UBERON:0001890!8.83e-07!41;UBERON:0006240!8.83e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0000125;4.42e-08;9!UBERON:0002308;4.42e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000125,3.97e-08,9;UBERON:0002308,3.97e-08,9 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0.123766352960047,0,0.672325146451775,0,0.730310090387373,0,0.123121058076788,0,0.313454721478088,0,0.410623275218653,0.627713197974014,0.152826811495903,0.0821005894499457,0.236132343941038,2.36018566109342,11.5148819429164,2.32224184974114,0,0,0.369754010166788,0.232401601740905,0,0.587200878669695,1.66198622559563,2.00544447470142,3.25516306073778,0.223915474239924,0,0.257575567634187,1.01778767145695,1.13362783106643,0.970336244751265,0.464858073811369,0.822335776043652,1.85823822537062,0.28769239232215,0.512321413058201,0.945928919554341,0.344745680736619,0.645484683583826,0,1.31769637679823,0,0.224723484445085,0.918251677112708,0.641858054152187,0.639337125799041,0.659702600373432,1.19678194572979,0.852449501065388,1.16083695451434,0.56738522469114,1.24564449799115,0.75374599577023,1.0429658368404,0.434377689410233,0.605399502633369,0,0.316462387440884,0.633765858935825,1.06302149982522,0.628975936525128,0.898629049171961,0.150176892841506,0.64290234678832,0.570025487482497,0.39783335439818,0.91332076882317,0,1.09227722252426,1.77901850772711,0.853460445133014,0,0,1.32208974556972,1.90810750907073,1.1384259382189,1.76171156811282,0.764546456250458,1.32171328579026,2.80254281490768,0,10.2289080459193,13.3623659334716,10.896879446974,3.00935691703221,2.93330039970231,4.2610302516126,1.94826728407911,4.79064964606246,2.65145316727353,2.43687284041983,3.24964636518019,3.5865569523189,4.68213651215562,1.31550323682941,0.276350017785848,2.02862160014537,3.70716407905151,3.21048993707656,5.22677619024884,2.49280553934646,8.04763036564035,5.84166657320471,4.04831507231205,1.27426165729639,0,1.90090408889675,1.6563263098555,1.66382594500744,2.49861453104692,1.89421801635213,2.46338399076314,12.7012248231581,13.1045695933919,8.97911304073354,2.43806866313962,0,0,0,1.00267582127178,0,0,0.486634870302636,0.378139268656271,0.221729397462564,0.087834785693126,0.327447688744282,0,0,0,0.870648686496336,0.398873881556595,2.8618874916641,2.28797964312051,1.85728750664782,0,0,0.347140501607594,0,0,0,0,0.258416759169329,0,0.66944122552934,0,0,0.488124115096339,0,0.81014194788176,0.17859945656816,0,0.112611480483322,0,0,0,7.9068250461638,15.511210565933,0,0,0.12663051166458,0.662045904066094,0.860509862246441,0.354668382198357,0,0,0.49333509683432,0.622422070799533,0,0.163461903113459,0,0,0,0.312160076830321,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0,0,0,1.07633781413317,0,0.635795703478686,0.300091096084402,0.103052529238439,0.772921620136887,0.18611685633159,0.675105328965065,0.0974370051611986,1.26216887122057,0.184099797284599,0,0.355009592516614,0.403008392910561,0,0,0,0,0.365921118388786,0,0.348581828608555,0.414644220061482,0,0.72995471815166,0,1.28648187638577,0,0.464367928031979,0.721879481669586,0.236613600079688,0.337169380156203,0.241011029883482,0.220587945464788,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0.277765335475589,0.325808305310325,0,0,0.34779121492523,0.117408694235822,0.288732895522148,0,0.380508304469197,0,0,0,0,0.445893486866185,0,0.16798212819886,0,0,0,0,0,0.44024217006613,1.24396869324463,0.720599767084807,1.38866676769018,0,0,0,0,0.102827492703324,0,0,0,0,0.22001485746285,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0.871533458600294,0.099972991182057,0,1.00451418286425,0,0,0,0,0.144781306667579,0,0.179060963239896,0.224170287987055,10.0485687702983,13.1532820664306,6.93052395910641,1.01637849688985,0,0.773288812777695,0.167516265334349,0.637938751653163,6.74106321552464,2.99161459204025,6.21623270154053,0,0,0.271265023699736,0.207970861530807,1.24900292158013,0.157702415033935,0.117141414992713,0.300946099727719,0,1.03473071292505,0.664225598535437,0.184369168541703,0.0868836144680828,0,0,2.89475236572042,3.01999881146064,3.94891963872744,0.606255142892519,0,0,0.496215615637554,0.306923946576125,0,0.384417447767103,0,0.160853921143607,0,0,0.177561725313127,0.164254312027618,0.519254429183621,0.348631135379878,0,0.40101294060657,0.184161977871793,0,0,0.393373244878272,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0.219259876645935,0.261435451024901,0,0,0,0.412164046590889,0.0915694648183434,0.165018999841176,0,0,0,0,0.154048617114644,0.307007349452259,0,0,0,0,0.356128142586949,0,0.192190067365106,0.127612712494584,0.4046311234222,0,1.25924938732256,0,0,0,0,0.37064843820784,0.143124886741991,0,0,0,0,0,0,0,0,0,0.235624804691373,0,1.58510321173008,0,0,0,1.05650146756755,0.136499911407986,0.141405431953713,0,0,0,0.876901770507525,0,0,0.202910376962704,1.239293992399,0,0.430234056612155,0,0.35667105148125,0,0.844430541190656,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,2.53723804616085,0.764637207142375,2.27858874869665,1.19115887728894,1.64544909234478,1.29694662238543,0,0.79312517629427,0.106824071127473,0,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| |||
|short_description=p3@KDM3A | |||
}} |
Latest revision as of 19:00, 18 September 2015
Short description: | p3@KDM3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KDM3A_5end |
Coexpression cluster: | C1212_immature_CD4_Natural_CD8_cord_lymphangiectasia_Basophils |
Association with transcript: | -205bp_to_ENST00000498528_5end |
EntrezGene: | KDM3A |
HGNC: | 20815 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.36e-22 | 136 |
mature alpha-beta T cell | 2.01e-19 | 18 |
alpha-beta T cell | 2.01e-19 | 18 |
immature T cell | 2.01e-19 | 18 |
mature T cell | 2.01e-19 | 18 |
immature alpha-beta T cell | 2.01e-19 | 18 |
T cell | 4.99e-16 | 25 |
pro-T cell | 4.99e-16 | 25 |
hematopoietic stem cell | 3.30e-15 | 168 |
lymphoid lineage restricted progenitor cell | 8.20e-15 | 52 |
lymphocyte | 2.28e-14 | 53 |
common lymphoid progenitor | 2.28e-14 | 53 |
hematopoietic cell | 1.45e-13 | 177 |
granulocyte | 6.29e-13 | 8 |
nongranular leukocyte | 1.19e-12 | 115 |
hematopoietic oligopotent progenitor cell | 1.68e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.68e-12 | 161 |
CD8-positive, alpha-beta T cell | 2.40e-12 | 11 |
hematopoietic lineage restricted progenitor cell | 3.60e-12 | 120 |
CD4-positive, alpha-beta T cell | 2.40e-10 | 6 |
blood cell | 7.94e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
neural nucleus | 3.97e-08 | 9 |
nucleus of brain | 3.97e-08 | 9 |