FFCP PHASE1:Hg19::chr2:73144617..73144654,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2016 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3340 | |||
|TSSclassifier=strong | |||
|UniProt=Q04741 | |||
|association_with_transcript=13bp_to_ENST00000258106,NM_004097,uc002sin.1_5end | |||
|cluster_id=chr2:73144617..73144654,+ | |||
|coexpression_cluster_id=C2705 | |||
|description=CAGE_peak_1_at_EMX1_5end | |||
|id=chr2:73144617..73144654,+ | |||
|ontology_enrichment_celltype=CL:0000047!1.81e-12!8;CL:0002319!2.39e-10!25;CL:0000540!1.07e-09!6;CL:0000031!1.07e-09!6;CL:0000404!1.07e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0000123;8.23e-08;2!CL:0000242;8.23e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,8.52e-08,2;CL:0000047,4.48e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!5.49e-39!25;UBERON:0000203!5.49e-39!25;UBERON:0002619!8.84e-35!22;UBERON:0001869!2.39e-34!32;UBERON:0001950!2.82e-32!20;UBERON:0001893!7.65e-32!34;UBERON:0002020!2.91e-31!34;UBERON:0003528!2.91e-31!34;UBERON:0002791!2.87e-30!33;UBERON:0001017!2.41e-28!82;UBERON:0002780!9.39e-27!41;UBERON:0001890!9.39e-27!41;UBERON:0006240!9.39e-27!41;UBERON:0005743!2.07e-26!86;UBERON:0003080!6.54e-26!42;UBERON:0000073!1.16e-22!94;UBERON:0001016!1.16e-22!94;UBERON:0000955!7.32e-21!69;UBERON:0006238!7.32e-21!69;UBERON:0001049!2.22e-19!57;UBERON:0005068!2.22e-19!57;UBERON:0006241!2.22e-19!57;UBERON:0007135!2.22e-19!57;UBERON:0002616!2.05e-18!59;UBERON:0003056!1.81e-16!61;UBERON:0003075!6.13e-14!86;UBERON:0007284!6.13e-14!86;UBERON:0002346!6.91e-13!90;UBERON:0000200!1.91e-11!6;UBERON:0004121!3.19e-11!169;UBERON:0001871!4.85e-11!7;UBERON:0000924!1.15e-10!173;UBERON:0006601!1.15e-10!173;UBERON:0000033!4.39e-10!123;UBERON:0002021!6.55e-10!5;UBERON:0001872!7.41e-10!5;UBERON:0000153!3.76e-09!129;UBERON:0007811!3.76e-09!129;UBERON:0000349!1.38e-08!5;UBERON:0007023!3.99e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;6.17e-55;20!UBERON:0000956;8.88e-53;25!UBERON:0000203;8.88e-53;25!UBERON:0002619;1.05e-49;22!UBERON:0001869;1.63e-43;32!UBERON:0001893;1.35e-40;34!UBERON:0002791;4.22e-39;32!UBERON:0003528;1.15e-36;34!UBERON:0002020;1.15e-36;34!UBERON:0002780;5.21e-24;41!UBERON:0001890;5.21e-24;41!UBERON:0000200;1.78e-20;6!UBERON:0002021;2.39e-17;5!UBERON:0001872;3.29e-17;5!UBERON:0000073;2.70e-16;53!UBERON:0002616;2.70e-16;53!UBERON:0000955;1.37e-13;68!UBERON:0001017;3.24e-13;75!UBERON:0001871;1.76e-12;6!UBERON:0001870;5.59e-11;3!UBERON:0001016;2.53e-09;83!UBERON:0002702;5.47e-08;2!UBERON:0002771;8.81e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,4.19e-55,20;UBERON:0000956,5.82e-53,25;UBERON:0000203,5.82e-53,25;UBERON:0002619,7.39e-50,22;UBERON:0001869,5.31e-49,32;UBERON:0001893,7.72e-46,34;UBERON:0002791,1.62e-44,32;UBERON:0003528,1.25e-41,34;UBERON:0002020,1.25e-41,34;UBERON:0002780,3.81e-37,41;UBERON:0001890,3.81e-37,41;UBERON:0003080,3.81e-37,41;UBERON:0006240,3.81e-37,41;UBERON:0001017,9.13e-32,81;UBERON:0001016,7.55e-28,89;UBERON:0000073,1.68e-27,53;UBERON:0002616,1.68e-27,53;UBERON:0000955,2.40e-26,68;UBERON:0006238,2.40e-26,68;UBERON:0001049,9.98e-26,56;UBERON:0005068,9.98e-26,56;UBERON:0006241,9.98e-26,56;UBERON:0007135,9.98e-26,56;UBERON:0003056,3.72e-23,61;UBERON:0000200,2.34e-20,6;UBERON:0002021,1.96e-17,5;UBERON:0001872,2.48e-17,5;UBERON:0003075,9.00e-16,82;UBERON:0007284,9.00e-16,82;UBERON:0002346,8.93e-15,86;UBERON:0010371,8.50e-14,104;UBERON:0004121,5.21e-13,171;UBERON:0000924,5.21e-13,171;UBERON:0006601,5.21e-13,171;UBERON:0001871,1.88e-12,6;UBERON:0007023,3.67e-12,114;UBERON:0011216,3.93e-11,223;UBERON:0001870,5.99e-11,3;UBERON:0010314,1.73e-10,132;UBERON:0002702,6.07e-08,2;UBERON:0002771,9.75e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43117993565528,1.23186982565596,0.753255837568817,0.764134057479513,1.14940825229924,0.787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.38779902917337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10689594688802,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,7.8083912314573,2.31986643833309,7.37071567471135,3.18969375826582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509752546090077,7.47968408035852,0.223874754722178,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27541018183058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24568648489864,0,1.33496573924465,0,0,0,0,0,6.95903353436409,0.844016498463076,0,0,0,0,0,0.503865495708552,0.20453736500431,0.984678443688556,0,0,0,0,0,0,0,8.72399471485697,4.26733251544516,5.98841394003583,0,0,0,0.1137934482855,0,0,2.06846023944879,0,0.520874984799877,0,0,0,0,0,4.38770794307945,0,0,0.0769502585037971,0,0.23056390438806,0.359030577639089,0,0,0.0915975934018623,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0.282706142867882,0,0,0,0,1.48260564340311,0.617819694732514,0.626531697032732,0,0,0,0,0,0,0.394584402849391,0,10.1004011338062,0,1.80388103297391,1.03688191397247,0,0,0,0,0,0,0,0,0,3.31980669659857,0,0,0,0.0821154570532092,0,0,0,0,0,3.41878298161745,0,0.160317640503067,0,0,1.58499458869517,0.687219576995494,2.4023299700675,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393915911536118,0.824158583811665,0.539228350833479,0.295282444544246,0,0.795229689809303,0.408610218334727,0.482259445395058,0.137539436597234,0.415440338029185,0,0,3.88797162611358,0,15.1306958014461,24.3913834827741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,7.08854543973589,4.51497180137264,3.254964198369,0,0,0,0,0,0,0,0,2.34167452903441,6.66636731609796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.07439023612359,1.04397716786085,0,0,0,1.96997725189636,0,0,0,1.15748422962549,0.168942440653073,3.07489822305536,0.345430341731199,0,3.04168559533808,0.389720617678777,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92687675289379,14.1696576325585,3.83121261737163,2.87162909937057,4.53729053199093,7.26151150874288,1.13032951942296,0,0,0.353909170043221,0.183428598521679,0,0,0,0,0,0,0,0.261906694481422,0,0,5.33546918485318,4.68646859168308,3.9270491335225,4.37569090337957,4.92277328116398,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0.135939465953663,5.65645852640502,0,0,0,0,0,0,0,0,0,0.632054446930906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392600934460972,0.975343399858155,0,0,0,0,1.40363678077263,2.38740930193642,0.237840181555137,0,0,0.301925687133347,0,0,0.470317296361523,0,0,0,0,0,0,0,0,1.09935271517422,0,0,0,0,0,0,0,5.77927666622775,6.98161104544604,0.5290268405154,0,0,0,0,0,1.0135880080915,0,0.26721740526556,0,0,1.06090177505535,1.60778478093707,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p1@EMX1 | |||
}} |
Latest revision as of 08:49, 18 September 2015
Short description: | p1@EMX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EMX1_5end |
Coexpression cluster: | C2705_kidney_brain_occipital_duodenum_Neurons_Renal_temporal |
Association with transcript: | 13bp_to_ENST00000258106, NM_004097, uc002sin.1_5end |
EntrezGene: | EMX1 |
HGNC: | 3340 |
UniProt: | Q04741 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 8.52e-08 | 2 |
neuronal stem cell | 4.48e-07 | 8 |