FFCP PHASE1:Hg19::chr2:71295416..71295450,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55577 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17174 | |||
|TSSclassifier=strong | |||
|UniProt=C9JMR7,Q9UJ70,E9PPU6 | |||
|association_with_transcript=0bp_to_ENST00000455197,ENST00000455662,ENST00000531934_5end | |||
|cluster_id=chr2:71295416..71295450,+ | |||
|description=CAGE_peak_2_at_NAGK_5end | |||
|id=chr2:71295416..71295450,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.19e-12!180;CL:0000048!1.02e-09!430;CL:0002371!2.75e-09!591;CL:0000723!4.39e-09!436;CL:0000393!1.01e-08!60;CL:0000211!1.01e-08!60;CL:0000144!1.09e-08!625;CL:0000034!2.23e-08!444;CL:0000183!3.28e-08!59;CL:0000192!3.49e-08!42;CL:0000514!3.49e-08!42;CL:0002057!4.24e-08!42;CL:0000860!2.28e-07!45;CL:0000680!2.81e-07!57;CL:0000056!2.81e-07!57;CL:0000355!2.81e-07!57;CL:0000187!4.50e-07!54;CL:0000359!7.19e-07!32;CL:0002194!9.54e-07!63;CL:0000576!9.54e-07!63;CL:0000040!9.54e-07!63;CL:0000559!9.54e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.43e-07;39!CL:0000234;2.43e-07;39!CL:0000860;9.23e-07;33!CL:0002057;9.23e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,3.86e-10,427;CL:0000473,7.18e-10,48;CL:0000234,7.18e-10,48;CL:0000723,1.73e-09,433;CL:0000393,7.44e-09,61;CL:0000211,7.44e-09,61;CL:0000034,9.22e-09,441;CL:0000192,2.70e-08,43;CL:0000514,2.70e-08,43;CL:0000860,4.24e-08,42;CL:0002057,4.24e-08,42;CL:0002194,1.14e-07,59;CL:0000576,1.14e-07,59;CL:0000040,1.14e-07,59;CL:0000559,1.14e-07,59;CL:0000680,2.08e-07,58;CL:0000056,2.08e-07,58;CL:0000355,2.08e-07,58;CL:0000187,3.35e-07,55;CL:0002009,5.00e-07,61;CL:0000359,7.19e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.32e-14!216;UBERON:0002204!4.31e-11!167;UBERON:0000468!2.41e-09!659;UBERON:0000467!5.96e-09!625;UBERON:0000480!6.41e-09!626;UBERON:0004535!9.28e-08!110;UBERON:0001009!1.45e-07!113;UBERON:0002049!1.57e-07!79;UBERON:0007798!1.57e-07!79;UBERON:0002050!2.26e-07!605;UBERON:0005423!2.26e-07!605;UBERON:0000923!2.59e-07!604;UBERON:0005291!2.59e-07!604;UBERON:0006598!2.59e-07!604;UBERON:0002532!2.59e-07!604;UBERON:0000922!3.14e-07!612;UBERON:0000926!3.58e-07!448;UBERON:0004120!3.58e-07!448;UBERON:0006603!3.58e-07!448;UBERON:0004872!3.74e-07!84;UBERON:0001637!6.18e-07!42;UBERON:0003509!6.18e-07!42;UBERON:0004572!6.18e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,2.11e-14,203;UBERON:0000926,2.86e-12,315;UBERON:0004120,2.86e-12,315;UBERON:0006603,2.86e-12,315;UBERON:0002204,1.99e-11,167;UBERON:0004535,4.33e-08,109;UBERON:0002049,6.71e-08,78;UBERON:0007798,6.71e-08,78;UBERON:0001009,6.95e-08,112;UBERON:0004872,1.65e-07,83;UBERON:0001637,6.18e-07,42;UBERON:0003509,6.18e-07,42;UBERON:0004572,6.18e-07,42;UBERON:0005423,7.27e-07,581;UBERON:0002050,7.63e-07,564 | |||
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| |||
|short_description=p2@NAGK | |||
}} |
Latest revision as of 07:27, 18 September 2015
Short description: | p2@NAGK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NAGK_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000455197, ENST00000455662, ENST00000531934_5end |
EntrezGene: | NAGK |
HGNC: | 17174 |
UniProt: | C9JMR7Q9UJ70E9PPU6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 3.86e-10 | 427 |
defensive cell | 7.18e-10 | 48 |
phagocyte | 7.18e-10 | 48 |
somatic stem cell | 1.73e-09 | 433 |
electrically responsive cell | 7.44e-09 | 61 |
electrically active cell | 7.44e-09 | 61 |
stem cell | 9.22e-09 | 441 |
smooth muscle cell | 2.70e-08 | 43 |
smooth muscle myoblast | 2.70e-08 | 43 |
classical monocyte | 4.24e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.24e-08 | 42 |
monopoietic cell | 1.14e-07 | 59 |
monocyte | 1.14e-07 | 59 |
monoblast | 1.14e-07 | 59 |
promonocyte | 1.14e-07 | 59 |
muscle precursor cell | 2.08e-07 | 58 |
myoblast | 2.08e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.08e-07 | 58 |
muscle cell | 3.35e-07 | 55 |
macrophage dendritic cell progenitor | 5.00e-07 | 61 |
vascular associated smooth muscle cell | 7.19e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 2.11e-14 | 203 |
mesoderm | 2.86e-12 | 315 |
mesoderm-derived structure | 2.86e-12 | 315 |
presumptive mesoderm | 2.86e-12 | 315 |
musculoskeletal system | 1.99e-11 | 167 |
cardiovascular system | 4.33e-08 | 109 |
vasculature | 6.71e-08 | 78 |
vascular system | 6.71e-08 | 78 |
circulatory system | 6.95e-08 | 112 |
splanchnic layer of lateral plate mesoderm | 1.65e-07 | 83 |
artery | 6.18e-07 | 42 |
arterial blood vessel | 6.18e-07 | 42 |
arterial system | 6.18e-07 | 42 |
developing anatomical structure | 7.27e-07 | 581 |
embryonic structure | 7.63e-07 | 564 |