FFCP PHASE1:Mm9::chr11:3863954..3863967,+: Difference between revisions
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{{FFCP|EntrezGene=64934|HGNC=|UniProt=Q9EQ61,Q5SQ20|association_with_transcript=-10bp_to_ENSMUST00000020705,ENSMUST00000109985,NM_022889,uc007hua.1_5end|description=CAGE_peak_3_at_Pes1_5end|id=chr11:3863954..3863967,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.17e-07!102;UBERON:0000924!1.17e-07!102;UBERON:0006601!1.17e-07!102;UBERON:0000153!8.91e-07!94;UBERON:0002346!8.97e-07!71;UBERON:0003075!8.97e-07!71;UBERON:0007284!8.97e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.93e-07,95;UBERON:0000924,1.93e-07,95;UBERON:0006601,1.93e-07,95;UBERON:0010371,3.55e-07,73;UBERON:0002346,8.52e-07,64;UBERON:0003075,8.52e-07,64;UBERON:0007284,8.52e-07,64|phase1_expression=1.28119077683835,0,0.454999239389536,0.60492842261366,0.500895729946347,0.671517087647559,0.934450562382103,1.67860320474049,3.09735188733667,2.80877431586392,8.90333434772626,6.38177271962691,0.684802919724823,1.31130603628496,0.999329285446988,2.22722794128809,4.89693314689703,2.68142840554502,2.33094537129756,1.69755860719212,1.36069264241712,0.992909512008853,1.56719873483361,0.95995453676044,2.2940928106717,0,0,0.215471232685889,1.71021077510736,1.00812051903972,1.33038306393183,5.08024538767705,14.1464901144451,0,2.02196133825892,2.1610503896604,2.24586291888606,0.418531630736908,0.7813353445238,1.0470474879476,0.588231488031014,2.04913645487534,0.485510353031154,2.39203954153597,2.23029248682932,2.56965453026354,0.782391344348039,3.92445281484804,1.75748946187577,3.4997381833371,3.49966054063406,4.31257693094915,4.02678254538567,0.725362142011344,2.35265659399725,2.31533492432352,3.15186783932632,1.03134418455488,3.64169629547276,3.70293685490423,3.1691570175309,3.04960078862219,2.66788438833342,1.7997994345628,1.97773272513395,0,0.898800331555214,1.53687322128622,2.69592992002042,1.89008313664367,3.78584930432488,3.14216082844184,1.54607978666129,2.44981598429908,2.68367318851062,2.75765635983006,0,3.19218345212969,4.14737639791857,2.37395317914349,3.38504281328916,2.6045668527838,2.79182999001381,2.25105044012672,2.29197371665215,1.76777151284201,2.70506193518296,2.42319279572891,3.93776205332557,1.96486056277642,0.579728977403356,0,6.11974200336975,0.539703191637817,0.649776417447669,1.34408066129201,1.40444420131752,2.04516387093669,1.81850203222008,2.47337702157238,1.40843419776681,1.28326477414318,2.54805239706646,7.11066703153331,2.16491041011214,1.52015919285059,3.53867111510348,0.79928715803342,2.07150306917737,1.92974780784272,1.90833859442749,2.43572382649713,2.99800146432876,1.80867168663147,1.99900802130698,1.38233250462643,0.988779870937496,1.01219549843938,0,1.7794353494215,3.3126227769059,0.484875253135222,0,3.80615036115011,2.30391377494801,0.766371165625774,1.91704199209472,1.19980546198682,2.28726408731516,3.89455662452539,3.66000482254901,3.8952849154988,3.12883776346098,2.55715457330331,1.45451631191692,2.27137768294861,3.36069900706044,1.7416975885413,2.52722758433675,1.26265113531884,2.21204753036596,4.82794419310293,3.78130472591233,2.41127708537144,4.01415344992834,2.43416068541215,2.81105173679186,1.55222022443409,2.58681591519411,1.89106080167819,1.93546236580344,2.84954452155847,2.22437799380478,3.83077383174383,2.26360350048738,1.79130840136644,2.1066395619397,2.57347907114715,2.55747149456033,1.86413195281952,3.04883877975425,2.16074473753218,1.18372367792605,2.16440654922144,2.62254091908543,1.62773761325285,1.60964040839772,3.26942958628075,1.31647879930784,1.64167464079095,1.94565142910054,2.33919979880532,1.3173006917463,2.14730270016595,1.47202963994889,2.16099685996497,0.330418782983798,2.11560453330835,2.77274725695804,1.85789337488351,1.9330119198314,2.21851877085677,0.889512175379481,1.52180500890047,0.949058123089023,1.97638745668813,1.50801125280162,2.18852119245266,1.16978452271472,0.898819408654221,1.08069024937347,0.995706366271836,3.41402221715547,2.51346727741403,1.1270773567308,2.44381593414377,3.49114476901726,4.48869247298039,1.07502113111237,0.738050739898011,1.8839847340965,1.1105744752962,1.1858105083486,2.66952169145751,2.16214894624523,2.9232074610031,1.82574109249653,1.20588579876208,0.763877555344259,0.863088412352432,3.56697498905078,1.37280706594041,0,0.744281895337007,0.936113019343682,1.76805214562978,1.07638448113147,1.92977408545347,1.66277871149944,1.70542270593436,2.28150967018836,2.37643120085263,1.64283173801951,0.670025029767263,1.42826184531608,1.75620283072019,1.7339865851681,3.5434350343804,1.43509291791738,1.63863314715738,1.55416483679306,0.867894351489069,0,1.63171705145613,3.44234991113325,0.827810238914197,2.0871576698413,2.46144541843627,3.60656879828686,2.7771801992481,1.89304931649754,1.56175497718655,1.72338718186239,1.43381278771531,1.11399337041197,2.83076530788832,0.809621403349789,2.33804686329049,1.18586333383957,2.24924921495265,1.70328102249922,2.84904965867608,4.72372182125371,1.31976098378028,1.32745138339963,2.42780636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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=64934 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q9EQ61,Q5SQ20 | |||
|association_with_transcript=-10bp_to_ENSMUST00000020705,ENSMUST00000109985,NM_022889,uc007hua.1_5end | |||
|cluster_id=chr11:3863954..3863967,+ | |||
|description=CAGE_peak_3_at_Pes1_5end | |||
|id=chr11:3863954..3863967,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.17e-07!102;UBERON:0000924!1.17e-07!102;UBERON:0006601!1.17e-07!102;UBERON:0000153!8.91e-07!94;UBERON:0002346!8.97e-07!71;UBERON:0003075!8.97e-07!71;UBERON:0007284!8.97e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.93e-07,95;UBERON:0000924,1.93e-07,95;UBERON:0006601,1.93e-07,95;UBERON:0010371,3.55e-07,73;UBERON:0002346,8.52e-07,64;UBERON:0003075,8.52e-07,64;UBERON:0007284,8.52e-07,64 | |||
|phase1_expression=1.28119077683835,0,0.454999239389536,0.60492842261366,0.500895729946347,0.671517087647559,0.934450562382103,1.67860320474049,3.09735188733667,2.80877431586392,8.90333434772626,6.38177271962691,0.684802919724823,1.31130603628496,0.999329285446988,2.22722794128809,4.89693314689703,2.68142840554502,2.33094537129756,1.69755860719212,1.36069264241712,0.992909512008853,1.56719873483361,0.95995453676044,2.2940928106717,0,0,0.215471232685889,1.71021077510736,1.00812051903972,1.33038306393183,5.08024538767705,14.1464901144451,0,2.02196133825892,2.1610503896604,2.24586291888606,0.418531630736908,0.7813353445238,1.0470474879476,0.588231488031014,2.04913645487534,0.485510353031154,2.39203954153597,2.23029248682932,2.56965453026354,0.782391344348039,3.92445281484804,1.75748946187577,3.4997381833371,3.49966054063406,4.31257693094915,4.02678254538567,0.725362142011344,2.35265659399725,2.31533492432352,3.15186783932632,1.03134418455488,3.64169629547276,3.70293685490423,3.1691570175309,3.04960078862219,2.66788438833342,1.7997994345628,1.97773272513395,0,0.898800331555214,1.53687322128622,2.69592992002042,1.89008313664367,3.78584930432488,3.14216082844184,1.54607978666129,2.44981598429908,2.68367318851062,2.75765635983006,0,3.19218345212969,4.14737639791857,2.37395317914349,3.38504281328916,2.6045668527838,2.79182999001381,2.25105044012672,2.29197371665215,1.76777151284201,2.70506193518296,2.42319279572891,3.93776205332557,1.96486056277642,0.579728977403356,0,6.11974200336975,0.539703191637817,0.649776417447669,1.34408066129201,1.40444420131752,2.04516387093669,1.81850203222008,2.47337702157238,1.40843419776681,1.28326477414318,2.54805239706646,7.11066703153331,2.16491041011214,1.52015919285059,3.53867111510348,0.79928715803342,2.07150306917737,1.92974780784272,1.90833859442749,2.43572382649713,2.99800146432876,1.80867168663147,1.99900802130698,1.38233250462643,0.988779870937496,1.01219549843938,0,1.7794353494215,3.3126227769059,0.484875253135222,0,3.80615036115011,2.30391377494801,0.766371165625774,1.91704199209472,1.19980546198682,2.28726408731516,3.89455662452539,3.66000482254901,3.8952849154988,3.12883776346098,2.55715457330331,1.45451631191692,2.27137768294861,3.36069900706044,1.7416975885413,2.52722758433675,1.26265113531884,2.21204753036596,4.82794419310293,3.78130472591233,2.41127708537144,4.01415344992834,2.43416068541215,2.81105173679186,1.55222022443409,2.58681591519411,1.89106080167819,1.93546236580344,2.84954452155847,2.22437799380478,3.83077383174383,2.26360350048738,1.79130840136644,2.1066395619397,2.57347907114715,2.55747149456033,1.86413195281952,3.04883877975425,2.16074473753218,1.18372367792605,2.16440654922144,2.62254091908543,1.62773761325285,1.60964040839772,3.26942958628075,1.31647879930784,1.64167464079095,1.94565142910054,2.33919979880532,1.3173006917463,2.14730270016595,1.47202963994889,2.16099685996497,0.330418782983798,2.11560453330835,2.77274725695804,1.85789337488351,1.9330119198314,2.21851877085677,0.889512175379481,1.52180500890047,0.949058123089023,1.97638745668813,1.50801125280162,2.18852119245266,1.16978452271472,0.898819408654221,1.08069024937347,0.995706366271836,3.41402221715547,2.51346727741403,1.1270773567308,2.44381593414377,3.49114476901726,4.48869247298039,1.07502113111237,0.738050739898011,1.8839847340965,1.1105744752962,1.1858105083486,2.66952169145751,2.16214894624523,2.9232074610031,1.82574109249653,1.20588579876208,0.763877555344259,0.863088412352432,3.56697498905078,1.37280706594041,0,0.744281895337007,0.936113019343682,1.76805214562978,1.07638448113147,1.92977408545347,1.66277871149944,1.70542270593436,2.28150967018836,2.37643120085263,1.64283173801951,0.670025029767263,1.42826184531608,1.75620283072019,1.7339865851681,3.5434350343804,1.43509291791738,1.63863314715738,1.55416483679306,0.867894351489069,0,1.63171705145613,3.44234991113325,0.827810238914197,2.0871576698413,2.46144541843627,3.60656879828686,2.7771801992481,1.89304931649754,1.56175497718655,1.72338718186239,1.43381278771531,1.11399337041197,2.83076530788832,0.809621403349789,2.33804686329049,1.18586333383957,2.24924921495265,1.70328102249922,2.84904965867608,4.72372182125371,1.31976098378028,1.32745138339963,2.42780636154981,1.51161778482376,2.26326095707078,2.36241514304618,1.84461088766356,1.80899805217755,1.81766864738753,1.78248689192361,1.26414703174326,1.05418608574999,0,0,2.34079422240703,2.58717367565509,1.07168517515796,2.12808280370728,1.96205699362278,0.822745103010605,2.74018454203139,2.11204537257339,1.27099242518292,1.54369878638473,1.81374878235628,4.03661066739764,2.29189114726992,4.17803204010978,3.11867709515616,1.7488850197791,3.70850604021019,1.02522528478712,1.65109494370578,2.40752885580625,1.88368457004691,1.36694227721025,0.686334519619568,0.849892149969277,2.09927178485487,1.93479963326193,0,2.84702394223022,3.45643094115643,1.51207477150522,2.50905955217362,1.74690050996942,1.75323650300267,2.47960367176008,0.523511883968059,1.55537967950151,1.24267862617385,1.12738587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| |||
|short_description=p3@Pes1 | |||
}} |
Latest revision as of 11:38, 1 October 2015
Short description: | p3@Pes1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pes1_5end |
Coexpression cluster: | NA |
Association with transcript: | -10bp_to_ENSMUST00000020705, ENSMUST00000109985, NM_022889, uc007hua.1_5end |
EntrezGene: | Pes1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.93e-07 | 95 |
ectoderm | 1.93e-07 | 95 |
presumptive ectoderm | 1.93e-07 | 95 |
ecto-epithelium | 3.55e-07 | 73 |
neurectoderm | 8.52e-07 | 64 |
neural plate | 8.52e-07 | 64 |
presumptive neural plate | 8.52e-07 | 64 |