FFCP PHASE1:Mm9::chr11:33743526..33743629,-: Difference between revisions
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{{FFCP|EntrezGene=70357|HGNC=|MCL_coexpression_id=159|UniProt=Q9JJ57,Q3YAB6|association_with_transcript=0bp_to_ENSMUST00000065970,ENSMUST00000109340,ENSMUST00000166204,NM_001190885,NM_027398,uc007iko.2,uc007ikp.2,uc007ikq.2_5end|description=CAGE_peak_1_at_Kcnip1_5end|id=chr11:33743526..33743629,-|ontology_enrichment_celltype=CL:0000117!7.51e-16!23;CL:0000337!7.51e-16!23;CL:0000221!1.70e-15!44;CL:0000133!1.70e-15!44;CL:0002319!1.86e-15!43;CL:0000540!2.65e-14!33;CL:0000047!2.65e-14!33;CL:0000031!2.65e-14!33;CL:0000404!2.65e-14!33;CL:0000055!7.72e-11!50;CL:0000393!6.93e-10!39;CL:0000211!6.93e-10!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.92e-19,23;CL:0000337,1.92e-19,23;CL:0002319,1.91e-13,43;CL:0000221,7.14e-13,44;CL:0000133,7.14e-13,44;CL:0000540,2.05e-12,33;CL:0000047,2.05e-12,33;CL:0000031,2.05e-12,33;CL:0000404,2.05e-12,33;CL:0000393,4.46e-09,39;CL:0000211,4.46e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.89e-34!102;UBERON:0000924!1.89e-34!102;UBERON:0006601!1.89e-34!102;UBERON:0002346!7.32e-34!71;UBERON:0003075!7.32e-34!71;UBERON:0007284!7.32e-34!71;UBERON:0001017!1.12e-33!73;UBERON:0005743!1.12e-33!73;UBERON:0000073!1.91e-32!75;UBERON:0001016!1.91e-32!75;UBERON:0001049!2.62e-27!52;UBERON:0005068!2.62e-27!52;UBERON:0006241!2.62e-27!52;UBERON:0007135!2.62e-27!52;UBERON:0000033!7.26e-27!63;UBERON:0000955!3.03e-25!50;UBERON:0006238!3.03e-25!50;UBERON:0002616!2.07e-24!49;UBERON:0003056!9.03e-24!49;UBERON:0002020!1.44e-21!34;UBERON:0003080!1.36e-20!40;UBERON:0002780!8.51e-20!39;UBERON:0001890!8.51e-20!39;UBERON:0006240!8.51e-20!39;UBERON:0002791!2.05e-17!29;UBERON:0003528!2.05e-17!29;UBERON:0001893!2.05e-17!29;UBERON:0007811!7.50e-13!86;UBERON:0000956!9.14e-12!21;UBERON:0001869!9.14e-12!21;UBERON:0000203!9.14e-12!21;UBERON:0000153!1.01e-11!94;UBERON:0002619!8.39e-10!17;UBERON:0003076!3.43e-07!12;UBERON:0003057!3.43e-07!12;UBERON:0002420!5.74e-07!8;UBERON:0007245!5.74e-07!8;UBERON:0010009!5.74e-07!8;UBERON:0010011!5.74e-07!8;UBERON:0000454!5.74e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.03e-36,64;UBERON:0003075,7.03e-36,64;UBERON:0007284,7.03e-36,64;UBERON:0000073,5.51e-35,54;UBERON:0001017,3.03e-34,73;UBERON:0001049,3.50e-33,52;UBERON:0005068,3.50e-33,52;UBERON:0006241,3.50e-33,52;UBERON:0007135,3.50e-33,52;UBERON:0001016,1.11e-32,75;UBERON:0004121,4.55e-30,95;UBERON:0000924,4.55e-30,95;UBERON:0006601,4.55e-30,95;UBERON:0010371,1.31e-28,73;UBERON:0003056,1.61e-28,49;UBERON:0000955,7.47e-28,47;UBERON:0006238,7.47e-28,47;UBERON:0002616,7.80e-27,46;UBERON:0002020,1.32e-26,34;UBERON:0010314,1.08e-24,92;UBERON:0003080,1.58e-24,40;UBERON:0002780,1.55e-23,39;UBERON:0001890,1.55e-23,39;UBERON:0006240,1.55e-23,39;UBERON:0003528,2.11e-21,29;UBERON:0002791,2.11e-21,29;UBERON:0001893,2.11e-21,29;UBERON:0000956,2.51e-14,21;UBERON:0001869,2.51e-14,21;UBERON:0000203,2.51e-14,21;UBERON:0002619,7.15e-12,17;UBERON:0003076,7.24e-09,12;UBERON:0003057,7.24e-09,12;UBERON:0002420,2.48e-08,8;UBERON:0007245,2.48e-08,8;UBERON:0010009,2.48e-08,8;UBERON:0010011,2.48e-08,8;UBERON:0000454,2.48e-08,8;UBERON:0002021,9.88e-08,10;UBERON:0000411,9.88e-08,10;UBERON:0001950,9.88e-08,10;UBERON:0002240,2.24e-07,6;UBERON:0005174,2.24e-07,6;UBERON:0001137,2.24e-07,6|phase1_expression=0.960893082628764,0,0,0.30246421130683,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08207792725135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.50298109883741,23.726107735323,13.8045228342741,7.41928034614421,20.125359011096,0,0,0,0,0,0,22.0524942336962,19.5726662330652,25.3532561402472,2.37191172448392,0,0,0,0,1.49800055259202,0.768436610643109,5.59923906465779,6.61529097825284,6.30974884054146,66.84233035049,67.5857735311937,5.38959516545798,3.25874601462004,5.51531271966013,26.4278114398533,19.2807880508633,19.9688493233117,26.7729164092293,23.6038120494217,26.5665818983948,24.8472869111229,23.6360296213306,21.697351184307,66.2914317315752,61.5045661052125,45.1086658897227,0.075726193333184,0,0,0,0,1.07940638327563,0,0,0.983110940922263,0,0,0,0.704217098883403,0,0,0,0.216491041011214,0,0,0.79928715803342,0,4.89859058913922,2.25530924795977,4.56698217468212,4.38169444786511,5.87818298155228,4.35078216402108,3.01599819191221,0,0,0,0,0,0,0,2.34224637609238,6.91174132484402,0.255457055208591,0,0,0,42.0911696727552,15.5550204958333,24.2512899577828,18.0777292999968,15.8543583544805,24.3112012134685,21.2536054618763,0,0,0,1.05220927943237,4.03373373184381,1.83921683546778,1.0803727788321,4.37043971723574,8.09634339900802,7.81493693737584,8.80796210861451,12.1590584247337,0,0.756424320671277,1.40760899331159,0.657587197282725,0.556094498451196,0,0,1.79130840136644,0,0,0,0.414251545071004,0.234526059981096,0,0.23674473558521,0,0,0,0,0,0.16455984991348,0,0,0.146199987425332,0,0,13.4585567081041,12.7601719350313,0.330418782983798,0,0.426576501070468,0,0.38660238396628,0,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0.685491075658373,0,0,0.193952487167626,0.210407459670956,0,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,21.5137790583641,17.9333880486071,0,0,0.94652465824877,0.780877488593277,2.58508077279359,0,0.222798674082394,0.566153061577665,2.42886421004937,0.292255857911312,0.395287777946524,44.3423416662094,0,0.178065603667255,0.488660878060728,0,0,0.485561272309963,0,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0.340439605753788,1.44048875225048,1.03486947026204,3.00071849044229,1.77340233642274,5.35106452806212,3.45552943264454,2.74018454203139,0,0,0,0.16488625294148,0.161464426695906,0,0.596861720015682,0.328281799490123,0,27.2575193955449,0,2.88941615148511,0.555583582109135,0,0,0,0,0,0,0,0.316335993581135,0.813277868507395,0.756037385752609,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0.259229946583586,0,0,0.598066184175915,0.165458490457098,0.194451188344048,0,0,0,0.13020438484395,0.209718688851422,0.241584120826006,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.60078132449013,13.8097570952153,13.7494923225455,17.7008777813998,6.85082519770642,11.3309084608455,11.4753825039407,4.05289082901798,10.8754178156209,10.3552062350364,1.3492355185943,3.59122386060928,3.41467211508268,5.10524105843418,6.07878171621149,4.96377472815038,4.00044110042907,4.53277125925567,2.56735367673452,4.04315538822076,4.56262739802432,3.77252682772152,5.3375659257833,4.60981097315059,5.68611142660571,4.28664322154766,3.59241410429052,5.20854895252004,4.12085900803307,4.71036544430071,2.05721551431249,4.43689515398344,2.86123427936785,4.21504608233753,5.08190654242785,5.753793336634,4.75612729469209,3.41990624869196,4.07412341537585,2.24456908663095,5.69448086996036,4.72821515402705,4.50154147486658,4.64810523557898,3.47231899766054,7.49431733813838,4.67863216890817,3.22306581072447,2.29545998482612,2.42650561031467,1.39120701372253|short_description=p1@Kcnip1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70357 | |||
|HGNC= | |||
|MCL_coexpression_id=159 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JJ57,Q3YAB6 | |||
|association_with_transcript=0bp_to_ENSMUST00000065970,ENSMUST00000109340,ENSMUST00000166204,NM_001190885,NM_027398,uc007iko.2,uc007ikp.2,uc007ikq.2_5end | |||
|cluster_id=chr11:33743526..33743629,- | |||
|description=CAGE_peak_1_at_Kcnip1_5end | |||
|id=chr11:33743526..33743629,- | |||
|ontology_enrichment_celltype=CL:0000117!7.51e-16!23;CL:0000337!7.51e-16!23;CL:0000221!1.70e-15!44;CL:0000133!1.70e-15!44;CL:0002319!1.86e-15!43;CL:0000540!2.65e-14!33;CL:0000047!2.65e-14!33;CL:0000031!2.65e-14!33;CL:0000404!2.65e-14!33;CL:0000055!7.72e-11!50;CL:0000393!6.93e-10!39;CL:0000211!6.93e-10!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.92e-19,23;CL:0000337,1.92e-19,23;CL:0002319,1.91e-13,43;CL:0000221,7.14e-13,44;CL:0000133,7.14e-13,44;CL:0000540,2.05e-12,33;CL:0000047,2.05e-12,33;CL:0000031,2.05e-12,33;CL:0000404,2.05e-12,33;CL:0000393,4.46e-09,39;CL:0000211,4.46e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.89e-34!102;UBERON:0000924!1.89e-34!102;UBERON:0006601!1.89e-34!102;UBERON:0002346!7.32e-34!71;UBERON:0003075!7.32e-34!71;UBERON:0007284!7.32e-34!71;UBERON:0001017!1.12e-33!73;UBERON:0005743!1.12e-33!73;UBERON:0000073!1.91e-32!75;UBERON:0001016!1.91e-32!75;UBERON:0001049!2.62e-27!52;UBERON:0005068!2.62e-27!52;UBERON:0006241!2.62e-27!52;UBERON:0007135!2.62e-27!52;UBERON:0000033!7.26e-27!63;UBERON:0000955!3.03e-25!50;UBERON:0006238!3.03e-25!50;UBERON:0002616!2.07e-24!49;UBERON:0003056!9.03e-24!49;UBERON:0002020!1.44e-21!34;UBERON:0003080!1.36e-20!40;UBERON:0002780!8.51e-20!39;UBERON:0001890!8.51e-20!39;UBERON:0006240!8.51e-20!39;UBERON:0002791!2.05e-17!29;UBERON:0003528!2.05e-17!29;UBERON:0001893!2.05e-17!29;UBERON:0007811!7.50e-13!86;UBERON:0000956!9.14e-12!21;UBERON:0001869!9.14e-12!21;UBERON:0000203!9.14e-12!21;UBERON:0000153!1.01e-11!94;UBERON:0002619!8.39e-10!17;UBERON:0003076!3.43e-07!12;UBERON:0003057!3.43e-07!12;UBERON:0002420!5.74e-07!8;UBERON:0007245!5.74e-07!8;UBERON:0010009!5.74e-07!8;UBERON:0010011!5.74e-07!8;UBERON:0000454!5.74e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.03e-36,64;UBERON:0003075,7.03e-36,64;UBERON:0007284,7.03e-36,64;UBERON:0000073,5.51e-35,54;UBERON:0001017,3.03e-34,73;UBERON:0001049,3.50e-33,52;UBERON:0005068,3.50e-33,52;UBERON:0006241,3.50e-33,52;UBERON:0007135,3.50e-33,52;UBERON:0001016,1.11e-32,75;UBERON:0004121,4.55e-30,95;UBERON:0000924,4.55e-30,95;UBERON:0006601,4.55e-30,95;UBERON:0010371,1.31e-28,73;UBERON:0003056,1.61e-28,49;UBERON:0000955,7.47e-28,47;UBERON:0006238,7.47e-28,47;UBERON:0002616,7.80e-27,46;UBERON:0002020,1.32e-26,34;UBERON:0010314,1.08e-24,92;UBERON:0003080,1.58e-24,40;UBERON:0002780,1.55e-23,39;UBERON:0001890,1.55e-23,39;UBERON:0006240,1.55e-23,39;UBERON:0003528,2.11e-21,29;UBERON:0002791,2.11e-21,29;UBERON:0001893,2.11e-21,29;UBERON:0000956,2.51e-14,21;UBERON:0001869,2.51e-14,21;UBERON:0000203,2.51e-14,21;UBERON:0002619,7.15e-12,17;UBERON:0003076,7.24e-09,12;UBERON:0003057,7.24e-09,12;UBERON:0002420,2.48e-08,8;UBERON:0007245,2.48e-08,8;UBERON:0010009,2.48e-08,8;UBERON:0010011,2.48e-08,8;UBERON:0000454,2.48e-08,8;UBERON:0002021,9.88e-08,10;UBERON:0000411,9.88e-08,10;UBERON:0001950,9.88e-08,10;UBERON:0002240,2.24e-07,6;UBERON:0005174,2.24e-07,6;UBERON:0001137,2.24e-07,6 | |||
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|short_description=p1@Kcnip1 | |||
}} |
Latest revision as of 07:50, 27 September 2015
Short description: | p1@Kcnip1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Kcnip1_5end |
Coexpression cluster: | MCL_coexpression_mm9:159 |
Association with transcript: | 0bp_to_ENSMUST00000065970, ENSMUST00000109340, ENSMUST00000166204, NM_001190885, NM_027398, uc007iko.2, uc007ikp.2, uc007ikq.2_5end |
EntrezGene: | Kcnip1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.92e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.92e-19 | 23 |
neural cell | 1.91e-13 | 43 |
ectodermal cell | 7.14e-13 | 44 |
neurectodermal cell | 7.14e-13 | 44 |
neuron | 2.05e-12 | 33 |
neuronal stem cell | 2.05e-12 | 33 |
neuroblast | 2.05e-12 | 33 |
electrically signaling cell | 2.05e-12 | 33 |
electrically responsive cell | 4.46e-09 | 39 |
electrically active cell | 4.46e-09 | 39 |