FFCP PHASE1:Mm9::chr11:31900496..31900507,+: Difference between revisions
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{{FFCP|EntrezGene=18197|HGNC=|MCL_coexpression_id=13|UniProt=Q5SS03|association_with_transcript=0bp_to_ENSMUST00000093219_5end|description=CAGE_peak_3_at_Nsg2_5end|id=chr11:31900496..31900507,+|ontology_enrichment_celltype=CL:0002319!4.49e-17!43;CL:0000540!4.60e-17!33;CL:0000047!4.60e-17!33;CL:0000031!4.60e-17!33;CL:0000404!4.60e-17!33;CL:0000221!6.44e-17!44;CL:0000133!6.44e-17!44;CL:0000117!1.71e-15!23;CL:0000337!1.71e-15!23;CL:0000055!8.72e-12!50;CL:0000393!1.08e-11!39;CL:0000211!1.08e-11!39|ontology_enrichment_celltype_v019_2=CL:0000540,2.97e-19,33;CL:0000047,2.97e-19,33;CL:0000031,2.97e-19,33;CL:0000404,2.97e-19,33;CL:0000117,5.11e-19,23;CL:0000337,5.11e-19,23;CL:0002319,3.93e-18,43;CL:0000221,2.20e-17,44;CL:0000133,2.20e-17,44;CL:0000393,2.52e-14,39;CL:0000211,2.52e-14,39;CL:0002609,7.18e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.11e-34!73;UBERON:0005743!2.11e-34!73;UBERON:0000073!1.17e-33!75;UBERON:0001016!1.17e-33!75;UBERON:0004121!2.20e-29!102;UBERON:0000924!2.20e-29!102;UBERON:0006601!2.20e-29!102;UBERON:0002346!1.12e-27!71;UBERON:0003075!1.12e-27!71;UBERON:0007284!1.12e-27!71;UBERON:0001049!1.07e-25!52;UBERON:0005068!1.07e-25!52;UBERON:0006241!1.07e-25!52;UBERON:0007135!1.07e-25!52;UBERON:0007811!3.64e-25!86;UBERON:0000955!1.41e-24!50;UBERON:0006238!1.41e-24!50;UBERON:0002616!6.39e-24!49;UBERON:0000033!1.29e-23!63;UBERON:0002020!1.15e-22!34;UBERON:0000153!3.12e-22!94;UBERON:0003056!1.21e-21!49;UBERON:0003080!1.98e-21!40;UBERON:0002780!6.93e-21!39;UBERON:0001890!6.93e-21!39;UBERON:0006240!6.93e-21!39;UBERON:0002791!1.01e-19!29;UBERON:0003528!1.01e-19!29;UBERON:0001893!1.01e-19!29;UBERON:0000956!9.40e-15!21;UBERON:0001869!9.40e-15!21;UBERON:0000203!9.40e-15!21;UBERON:0002619!6.71e-12!17;UBERON:0002021!2.57e-08!10;UBERON:0000411!2.57e-08!10;UBERON:0001950!2.57e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.68e-38,73;UBERON:0001016,9.65e-37,75;UBERON:0000073,5.00e-32,54;UBERON:0001049,2.61e-30,52;UBERON:0005068,2.61e-30,52;UBERON:0006241,2.61e-30,52;UBERON:0007135,2.61e-30,52;UBERON:0002346,4.27e-30,64;UBERON:0003075,4.27e-30,64;UBERON:0007284,4.27e-30,64;UBERON:0004121,2.49e-28,95;UBERON:0000924,2.49e-28,95;UBERON:0006601,2.49e-28,95;UBERON:0002020,5.08e-28,34;UBERON:0000955,1.04e-26,47;UBERON:0006238,1.04e-26,47;UBERON:0002616,6.57e-26,46;UBERON:0003080,1.27e-24,40;UBERON:0003528,2.52e-24,29;UBERON:0002791,2.52e-24,29;UBERON:0001893,2.52e-24,29;UBERON:0002780,6.08e-24,39;UBERON:0001890,6.08e-24,39;UBERON:0006240,6.08e-24,39;UBERON:0010371,1.46e-23,73;UBERON:0003056,1.11e-22,49;UBERON:0000956,4.33e-18,21;UBERON:0001869,4.33e-18,21;UBERON:0000203,4.33e-18,21;UBERON:0010314,1.08e-16,92;UBERON:0002619,1.64e-14,17;UBERON:0002021,5.01e-10,10;UBERON:0000411,5.01e-10,10;UBERON:0001950,5.01e-10,10;UBERON:0002420,2.47e-07,8;UBERON:0007245,2.47e-07,8;UBERON:0010009,2.47e-07,8;UBERON:0010011,2.47e-07,8;UBERON:0000454,2.47e-07,8|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0.281577444303333,0,0.171217968225505,0,2.73921167889929,0.174840804837995,0,0,0,0.946386496074713,0.274228867211478,0,5.10259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.5407546914134,3.51497892375155,3.11087838518853,0.839918529752175,4.31257693094915,0,5.80289713609076,4.36921938885203,0,0,0,37.226228798166,46.5512061759389,41.8328726314078,0,0,0,0,0,6.2916023208865,6.91592949578798,57.6514244435136,96.9342637221539,70.0382121300102,29.136400409188,30.7007271922743,43.3617429220937,47.5393536250452,71.6990653555816,19.82085857989,29.7511497738487,25.3450779872802,34.5542073853108,45.6523341576024,36.4639359389732,24.0097379141188,36.0168070420275,35.9075882275504,31.8198872311561,26.6235043094322,31.3151068986505,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0.702222100658759,0,0,0,0.422530259330042,0,0,0,0,0,0,0.5709193985953,1.29468941823586,1.33597925158342,2.60227990149204,0.608930956624282,1.15307748628029,0.60289056221049,2.58695155698551,0.628332956648377,0,0,0.884610551949874,0.161766849947409,0,0,0,3.80615036115011,2.93225389538837,0.255457055208591,0,0,0,19.3229924832221,31.1100409916666,43.3507514789382,35.6339856394167,39.1244649715406,22.8566849015516,25.7963608277735,0,0.124406970610093,0,0.631325567659422,0.520481771850815,0.919608417733892,2.52086981727489,2.10986744970001,1.83698547708585,2.69038812598185,2.71735001223214,2.06962696591213,0,0.378212160335639,0.175951124163949,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0.32833492815819,0.0810688095458557,0.146199987425332,0.439100230582101,0,49.628427861134,51.6581154144008,0,0,0,0.464473343720877,0.38660238396628,0,0.667134131534611,0.380451252225118,0.474529061544512,1.15289268306808,0.251335208800269,1.39269530428806,0.38992817423824,0,0.864552199498777,0.796565093017469,0,0.456994050438915,0,0.407302655690628,0,0.350679099451593,0.442655759869801,0.147610147979602,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18197 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q5SS03 | |||
|association_with_transcript=0bp_to_ENSMUST00000093219_5end | |||
|cluster_id=chr11:31900496..31900507,+ | |||
|description=CAGE_peak_3_at_Nsg2_5end | |||
|id=chr11:31900496..31900507,+ | |||
|ontology_enrichment_celltype=CL:0002319!4.49e-17!43;CL:0000540!4.60e-17!33;CL:0000047!4.60e-17!33;CL:0000031!4.60e-17!33;CL:0000404!4.60e-17!33;CL:0000221!6.44e-17!44;CL:0000133!6.44e-17!44;CL:0000117!1.71e-15!23;CL:0000337!1.71e-15!23;CL:0000055!8.72e-12!50;CL:0000393!1.08e-11!39;CL:0000211!1.08e-11!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.97e-19,33;CL:0000047,2.97e-19,33;CL:0000031,2.97e-19,33;CL:0000404,2.97e-19,33;CL:0000117,5.11e-19,23;CL:0000337,5.11e-19,23;CL:0002319,3.93e-18,43;CL:0000221,2.20e-17,44;CL:0000133,2.20e-17,44;CL:0000393,2.52e-14,39;CL:0000211,2.52e-14,39;CL:0002609,7.18e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.11e-34!73;UBERON:0005743!2.11e-34!73;UBERON:0000073!1.17e-33!75;UBERON:0001016!1.17e-33!75;UBERON:0004121!2.20e-29!102;UBERON:0000924!2.20e-29!102;UBERON:0006601!2.20e-29!102;UBERON:0002346!1.12e-27!71;UBERON:0003075!1.12e-27!71;UBERON:0007284!1.12e-27!71;UBERON:0001049!1.07e-25!52;UBERON:0005068!1.07e-25!52;UBERON:0006241!1.07e-25!52;UBERON:0007135!1.07e-25!52;UBERON:0007811!3.64e-25!86;UBERON:0000955!1.41e-24!50;UBERON:0006238!1.41e-24!50;UBERON:0002616!6.39e-24!49;UBERON:0000033!1.29e-23!63;UBERON:0002020!1.15e-22!34;UBERON:0000153!3.12e-22!94;UBERON:0003056!1.21e-21!49;UBERON:0003080!1.98e-21!40;UBERON:0002780!6.93e-21!39;UBERON:0001890!6.93e-21!39;UBERON:0006240!6.93e-21!39;UBERON:0002791!1.01e-19!29;UBERON:0003528!1.01e-19!29;UBERON:0001893!1.01e-19!29;UBERON:0000956!9.40e-15!21;UBERON:0001869!9.40e-15!21;UBERON:0000203!9.40e-15!21;UBERON:0002619!6.71e-12!17;UBERON:0002021!2.57e-08!10;UBERON:0000411!2.57e-08!10;UBERON:0001950!2.57e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.68e-38,73;UBERON:0001016,9.65e-37,75;UBERON:0000073,5.00e-32,54;UBERON:0001049,2.61e-30,52;UBERON:0005068,2.61e-30,52;UBERON:0006241,2.61e-30,52;UBERON:0007135,2.61e-30,52;UBERON:0002346,4.27e-30,64;UBERON:0003075,4.27e-30,64;UBERON:0007284,4.27e-30,64;UBERON:0004121,2.49e-28,95;UBERON:0000924,2.49e-28,95;UBERON:0006601,2.49e-28,95;UBERON:0002020,5.08e-28,34;UBERON:0000955,1.04e-26,47;UBERON:0006238,1.04e-26,47;UBERON:0002616,6.57e-26,46;UBERON:0003080,1.27e-24,40;UBERON:0003528,2.52e-24,29;UBERON:0002791,2.52e-24,29;UBERON:0001893,2.52e-24,29;UBERON:0002780,6.08e-24,39;UBERON:0001890,6.08e-24,39;UBERON:0006240,6.08e-24,39;UBERON:0010371,1.46e-23,73;UBERON:0003056,1.11e-22,49;UBERON:0000956,4.33e-18,21;UBERON:0001869,4.33e-18,21;UBERON:0000203,4.33e-18,21;UBERON:0010314,1.08e-16,92;UBERON:0002619,1.64e-14,17;UBERON:0002021,5.01e-10,10;UBERON:0000411,5.01e-10,10;UBERON:0001950,5.01e-10,10;UBERON:0002420,2.47e-07,8;UBERON:0007245,2.47e-07,8;UBERON:0010009,2.47e-07,8;UBERON:0010011,2.47e-07,8;UBERON:0000454,2.47e-07,8 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0.281577444303333,0,0.171217968225505,0,2.73921167889929,0.174840804837995,0,0,0,0.946386496074713,0.274228867211478,0,5.10259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.5407546914134,3.51497892375155,3.11087838518853,0.839918529752175,4.31257693094915,0,5.80289713609076,4.36921938885203,0,0,0,37.226228798166,46.5512061759389,41.8328726314078,0,0,0,0,0,6.2916023208865,6.91592949578798,57.6514244435136,96.9342637221539,70.0382121300102,29.136400409188,30.7007271922743,43.3617429220937,47.5393536250452,71.6990653555816,19.82085857989,29.7511497738487,25.3450779872802,34.5542073853108,45.6523341576024,36.4639359389732,24.0097379141188,36.0168070420275,35.9075882275504,31.8198872311561,26.6235043094322,31.3151068986505,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0.702222100658759,0,0,0,0.422530259330042,0,0,0,0,0,0,0.5709193985953,1.29468941823586,1.33597925158342,2.60227990149204,0.608930956624282,1.15307748628029,0.60289056221049,2.58695155698551,0.628332956648377,0,0,0.884610551949874,0.161766849947409,0,0,0,3.80615036115011,2.93225389538837,0.255457055208591,0,0,0,19.3229924832221,31.1100409916666,43.3507514789382,35.6339856394167,39.1244649715406,22.8566849015516,25.7963608277735,0,0.124406970610093,0,0.631325567659422,0.520481771850815,0.919608417733892,2.52086981727489,2.10986744970001,1.83698547708585,2.69038812598185,2.71735001223214,2.06962696591213,0,0.378212160335639,0.175951124163949,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0.32833492815819,0.0810688095458557,0.146199987425332,0.439100230582101,0,49.628427861134,51.6581154144008,0,0,0,0.464473343720877,0.38660238396628,0,0.667134131534611,0.380451252225118,0.474529061544512,1.15289268306808,0.251335208800269,1.39269530428806,0.38992817423824,0,0.864552199498777,0.796565093017469,0,0.456994050438915,0,0.407302655690628,0,0.350679099451593,0.442655759869801,0.147610147979602,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0.44292937929755,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,11.559642479121,10.3146284201139,0,0,3.47059041357882,7.80877488593277,6.46270193198397,0.955875191810208,1.78238939265915,1.13230612315533,5.26253912177363,5.55286130031493,8.69633111482352,34.7027021735552,0.141940085208269,0,0,0,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0,0,0,0,7.48967132658334,1.62054984628179,0.646793418913773,1.71469628025274,1.41872186913819,1.42695054081656,2.79733335023606,0.913394847343798,0,0,0.661585194164886,0,0.322928853391811,0.0603129249281559,0,0.164140899745061,0.291480836629851,6.30446026835733,0,0,0,0,0.136694227721025,0,0,0,0.138199973804424,0,0,0.813277868507395,0.324016022465404,0.209088296014469,0.218362563746178,0.404593039154462,0.826534557253359,0.523511883968059,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,11.0603892219862,0.405450430580328,0.718976700153791,2.85825810551149,6.44496104402933,7.9472541912506,6.61074972359829,9.59981926634752,12.5198397935703,10.6689529317,11.6958374758735,9.35595655101623,11.3529973135589,12.3889516312463,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,76.241498753304,77.3346397332057,64.1642975052124,75.0998406841915,43.1601987455505,50.6113911251099,44.5514850152992,36.9263386643861,40.7828168085784,40.385304316642,0.830298780673413,3.99024873401031,4.09760653809922,3.8897074730927,2.09613162627982,1.83843508450014,2.00022055021454,6.18105171716683,4.1719497246936,3.79045817645696,4.56262739802432,6.03604292435444,5.3375659257833,4.35371036353111,4.02048282689293,2.85776214769844,4.28772005995965,5.01563973205633,3.70877310722976,7.65434384698866,4.11443102862498,5.14679837862079,4.5302876089991,3.34296758254356,4.23492211868988,3.63842813934209,5.3049112133104,3.15683653725411,4.6173398707593,4.48913817326191,4.86403574309114,4.82671963640261,3.27384834535751,5.26785260032284,3.66522560864169,6.99469618226249,4.44470056046276,3.86767897286937,1.3390183244819,1.10295709559758,0.695603506861264 | |||
|short_description=p3@Nsg2 | |||
}} |
Latest revision as of 07:08, 27 September 2015
Short description: | p3@Nsg2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nsg2_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000093219_5end |
EntrezGene: | Nsg2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.97e-19 | 33 |
neuronal stem cell | 2.97e-19 | 33 |
neuroblast | 2.97e-19 | 33 |
electrically signaling cell | 2.97e-19 | 33 |
CNS neuron (sensu Vertebrata) | 5.11e-19 | 23 |
neuroblast (sensu Vertebrata) | 5.11e-19 | 23 |
neural cell | 3.93e-18 | 43 |
ectodermal cell | 2.20e-17 | 44 |
neurectodermal cell | 2.20e-17 | 44 |
electrically responsive cell | 2.52e-14 | 39 |
electrically active cell | 2.52e-14 | 39 |
neuron of cerebral cortex | 7.18e-07 | 6 |