FFCP PHASE1:Hg19::chr9:21994597..21994638,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:21994597..21994638,-
|short_description=p3@CDKN2A
|description=CAGE_peak_3_at_CDKN2A_5end
|association_with_transcript=-107bp_to_ENST00000361570,ENST000005...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1029 | |EntrezGene=1029 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1787 | |HGNC=1787 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N726 | |UniProt=Q8N726 | ||
|association_with_transcript=-107bp_to_ENST00000361570,ENST00000530628,NM_058195,uc003zpl.2_5end | |||
|cluster_id=chr9:21994597..21994638,- | |||
|description=CAGE_peak_3_at_CDKN2A_5end | |||
|id=chr9:21994597..21994638,- | |||
|ontology_enrichment_celltype=CL:0000548!2.10e-12!679;CL:0000004!2.10e-12!679;CL:0000255!2.10e-12!679;CL:0000012!4.61e-12!682;CL:0000003!1.09e-10!722;CL:0000066!4.19e-09!254;CL:0002371!3.97e-07!591;CL:0000055!9.55e-07!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.99e-10,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.50e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0005085!7.67e-07!29 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005085,2.30e-08,31;UBERON:0003102,5.26e-07,99 | |||
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|phase1_expression=0.54503513781167,1.49870366723688,1.40954404095971,1.0007329835313,1.34088328328186,0,0,1.26343974685366,2.08948502559871,0,0.697801167972428,6.77168253603534,3.69273769519835,2.35156070624089,2.65117900582333,0,1.80808358407193,0,0,3.20114750999649,6.5280221198161,1.25381888591235,1.14494394852423,1.77936752594749,0.87879847716362,0.687720651731561,0.821005894499457,0.629686250509434,0,0,0,2.75826367343678,2.71085326900425,1.47901604066715,19.1343985433345,3.12772311472327,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,1.05353633910031,0,0,0,5.18278135711102,0,0,0,3.56513462032555,0.589211814949674,0.221533894583621,0.541607727530031,5.63601806792971,8.19373889627233,8.71520894399483,12.4357508003632,11.8819265151372,0,0,0,4.53237370790265,0,0.34362744548263,0,0,0,0,0.150575119077773,0,0,0,0,0,0.802320587350522,0.289648807765598,0,0.670700859703636,0.895037932904712,3.2529523714611,2.50668955317945,1.73815822752988,4.7717156823066,0.486634870302636,3.49778823507051,4.43458794925128,3.42555664203192,0.196468613246569,4.73583874780305,2.59549109949101,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0.694281003215189,1.13061588384802,0.838998872419812,1.10047216776027,1.46296476575767,1.55050055501597,2.13459757612026,0.33472061276467,0.805658634218294,0,0.732186172644509,0,2.43042584364528,0.625098097988558,0.22452937262617,0.225222960966644,0,0.949265659568129,0.366403487860815,0,0,4.79703457356788,0,1.51956613997496,0,1.43418310374407,2.83734705758686,1.68203280042692,2.1349799145941,4.19334832309172,1.55605517699883,1.61652806483626,2.61539044981534,0.756787138224657,0.576175924479999,3.04617861383936,3.1216007683032,1.1409436430889,4.48346041655403,1.76151747965647,0.485618833104395,0.280901613404497,3.47062091133319,0.245668634623536,4.33968280938215,4.75201142912821,1.7308685049499,6.37112953356618,11.4978902690598,0.673344455816265,0,2.77064115484183,1.75591048352335,2.45190236639216,2.25357088359895,1.70148274740032,1.07633781413317,2.77624605464138,2.33125091275518,0.600182192168805,3.60683852334536,0,1.11670113798954,0.843881661206331,2.14361411354637,0,3.58994604704967,3.07127507955743,0,1.61203357164224,3.22165125389926,0.386521706326594,0.545492241181669,0,0,0,0,0,0,0,0,4.5026865673502,5.52539685409922,5.10804720835177,3.60939740834793,5.44211280183282,5.22612539242115,4.09718750801919,6.06616850028167,3.7039505495709,3.08451804844426,6.47190279168789,4.70931516300831,5.38646019724947,1.4763109092493,1.40241773803446,0.8231480226628,1.47008711385542,0,0,0,0,4.42758378755209,3.77449182656756,1.86575485194663,2.24803506515239,0.301586917234893,2.96283024507295,2.28065813717227,5.19967392639789,5.77325368101093,1.85488647960123,2.7003999674239,1.29929802984966,1.85194205030644,0.570762456703795,0,0,0,0.702012795417713,0.594524649154913,1.87467667973554,0.16798212819886,0.567100388969546,6.53777215730793,4.94077695473735,4.98397482914775,6.40462209264727,1.67292024625129,0.207328115540772,0,0,1.14296209725904,2.67391897890794,4.68869788840188,1.71072446022705,0.616964956219941,0,0.571652865261156,1.56983518083505,2.61576041299968,0.51336800074665,1.29271715757778,14.3062578340753,0.845302752556,0.797814349754612,2.08014873822732,5.65856223376713,7.09245660116391,4.26275486425759,0.142977993658148,3.25572963234866,4.11620168390384,0.65147236858747,0,0.791951872933429,0.602878754119172,1.74306691720059,0.599837947092342,0,0,0,2.63587341040741,3.44585807502342,1.42636905040718,0.434343920002738,0.821905290201534,1.43248770591916,22.3049436547119,0.197030760201927,0.215627574859517,0.385029108839245,0,1.30139853857622,0,0.502548796003046,0,0,0,0,0.981531933753119,4.50153468953709,1.89885516589815,1.03985430765404,2.49800584316026,2.83864347061082,0.702848489956279,3.00946099727719,9.09630016223939,5.17365356462525,1.99267679560631,1.65932251687533,5.12613325361689,0.391602314925481,1.71571711905428,0,0,0,2.72814814301633,3.32870879020994,7.25736703991233,2.72918588600655,0.153461973288062,1.68396056659844,1.53766979106841,3.07024349440022,0.804269605718038,0,2.00472601943452,3.55123450626254,2.54594183642808,1.55776328755086,1.62694529843943,4.95523743325651,0.200506470303285,1.38121483403844,2.29628896329214,2.36718518408732,2.36023946926963,0.451199612907412,0.385076685522074,3.13739907670742,8.76835347919564,3.79985864014353,2.27466768141793,2.04112446331819,2.15915916102139,4.62681758070868,5.41892875087706,5.01689773854853,0.764628819135115,0,3.80587083027703,1.53481913652154,0.784306353074702,0.256450125116389,4.59220503979588,0.650756789328606,0.103041011647722,4.2121953816438,2.55779449753823,3.44559322797703,2.60024098414608,0,0.676695028044854,1.07834031980251,0.614014698904518,0,0.429680979473094,1.30515024522806,0.170453254832202,1.06838442776085,0.661139661443912,1.15314040419064,0.765676274967505,1.2138933702666,1.85938219718914,0.31481234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| ||
|short_description=p3@CDKN2A | |||
}} | }} |
Latest revision as of 23:23, 16 September 2015
Short description: | p3@CDKN2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CDKN2A_5end |
Coexpression cluster: | NA |
Association with transcript: | -107bp_to_ENST00000361570, ENST00000530628, NM_058195, uc003zpl.2_5end |
EntrezGene: | CDKN2A |
HGNC: | 1787 |
UniProt: | Q8N726 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.99e-10 | 253 |
Ontology term | p-value | n |
---|---|---|
ectodermal placode | 2.30e-08 | 31 |
surface structure | 5.26e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.50e-07 | 106 |