FFCP PHASE1:Mm9::chr11:120852619..120852653,-: Difference between revisions
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{{FFCP|EntrezGene=104318|HGNC=|MCL_coexpression_id=526|UniProt=Q9DC28,Q3UBT6,A2ABP1,A8Y308|association_with_transcript=0bp_to_ENSMUST00000018274,NM_027874,NM_139059,uc007muz.1,uc007mva.1,uc007mvb.1_5end|description=CAGE_peak_2_at_Csnk1d_5end|id=chr11:120852619..120852653,-|ontology_enrichment_celltype=CL:0000540!6.34e-10!33;CL:0000047!6.34e-10!33;CL:0000031!6.34e-10!33;CL:0000404!6.34e-10!33;CL:0000221!1.42e-09!44;CL:0000133!1.42e-09!44;CL:0002319!2.06e-09!43;CL:0000393!1.38e-07!39;CL:0000211!1.38e-07!39;CL:0000117!2.34e-07!23;CL:0000337!2.34e-07!23;CL:0000055!7.73e-07!50|ontology_enrichment_celltype_v019_2=CL:0000540,6.34e-10,33;CL:0000047,6.34e-10,33;CL:0000031,6.34e-10,33;CL:0000404,6.34e-10,33;CL:0000221,1.42e-09,44;CL:0000133,1.42e-09,44;CL:0002319,2.06e-09,43;CL:0000393,1.38e-07,39;CL:0000211,1.38e-07,39;CL:0000117,2.34e-07,23;CL:0000337,2.34e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=28.1861970904437,32.4547129104606,27.2999543633722,30.246421130683,41.0734498556005,24.342494427224,20.0906870912152,20.6597317506522,55.329967805605,61.7930349490063,41.6059662787977,43.4758266524583,19.174481752295,17.8337620934755,14.9899392817048,19.6401009368131,25.1842276126133,19.4009231695316,23.5836825801871,14.429248161133,56.8089178209146,21.7447183129939,15.9331871374751,17.9191513528615,18.1233332043064,21.2465826722557,21.1073378117947,18.3150547783006,16.9120843316173,16.8860186939154,17.5167103417691,28.5763803056834,36.2888224674896,15.8481681015439,19.9307617628379,20.2806267337361,17.3543952823014,20.0895182753716,10.1573594788094,14.1351410872926,17.6469446409304,21.1744100337118,16.0218416500281,11.4566104357775,13.3817549209759,15.4179271815813,24.2541316747892,25.9449936092731,19.552070263368,25.8591765768797,27.7173114818218,28.7505128729943,35.2343472721246,33.3666585325218,30.9206295211067,28.0412785279182,22.6361417551618,27.8462929829819,63.7296851707733,71.4137822017244,64.6508031576303,24.7356508410466,25.789549087223,25.6471419425199,30.6548572395762,31.9716051725745,29.9600110518405,38.806048837477,44.5865332926454,49.5471793677305,44.1682418837902,28.8507494247842,24.5164080456291,47.6489208946171,66.900138770729,43.203282970671,18.7196997698961,22.3452841649078,24.4234387877427,63.964849549144,78.3134229236627,63.5514312079247,20.6595419261022,19.1339287410771,28.1148775909331,30.0521157183141,26.0540175862358,39.3302830691384,19.6130840732947,13.9807386197553,11.3047150593654,5.16254326188832,26.5188820146023,13.4925797909454,12.3457519315057,12.5447528387254,21.487996280158,16.1908806449155,13.5088722393492,12.0135455333516,27.323623436676,20.5322363862909,38.2207859559969,42.6640021891999,16.2368280758411,17.2284708523067,17.1878311305026,20.2105467102736,25.3759125974228,20.0396887737513,31.7478147982029,31.9688752227748,22.1390877365816,26.3764620967089,20.695612455884,20.3579877954074,38.3152199988279,19.0871151134283,22.1152637987469,19.7355556935839,18.3298460322127,15.5160081003271,27.9587641827183,24.8863677459815,21.154117388159,17.1156226989756,15.6957813102756,16.197373736822,11.5633906636489,17.2259235315546,21.0450277296568,31.1622793239904,19.1206752211504,14.8314965251592,19.5320761885986,17.3598151482501,17.720049309955,20.5271501506653,11.8779696463827,15.1518136238261,28.106015679944,31.4965883073858,31.5108727159361,28.9353250244573,18.3698547708585,20.8825364064305,21.6450983732974,20.1788629176432,37.7243987632474,36.6865795525569,28.3281309903958,24.9883134967435,28.6388666702366,23.3328951569852,26.3401134602168,32.6416197582329,22.4708219940235,13.1247432628505,13.924011470384,26.7192246570797,19.7001890384121,24.128316235776,24.6214525008619,21.8408297239618,21.1345944655708,22.3232586960392,21.7301455133692,14.8291984806305,14.9749463421267,18.879258369096,18.0783445287258,21.9299981137998,17.564009223284,17.8494536951294,17.0334858336943,21.4041593748912,17.8426142811251,23.5361004330554,29.6470668243975,32.0486607167405,29.1240462587931,25.0087570532945,20.4587800337281,23.0173007596197,20.404749646414,20.5873693405014,18.8501406600202,16.5133871794155,18.9115164505547,20.6728463990471,18.1555961894743,16.5287256801125,30.7261999543992,28.4478796398225,22.5415471346161,29.7330938654159,25.9896332804618,16.4117818543345,16.4414996523069,12.251642282307,13.5018905943582,9.74837594982224,14.2297261001831,25.6941462802785,23.193961423358,26.084005036643,17.2431103180227,24.8412474544989,17.8238096246994,22.1526025837124,18.159145398804,13.7280706594041,10.0637744569148,18.9791883310937,21.5305994449047,15.6598904327209,16.6839594575378,11.5786445127208,19.7685913478267,30.6976087068185,32.9189252412892,28.5171744102316,26.0506175600237,29.8161138246432,29.0413241880937,22.0501022079313,24.748717624672,16.3883870340093,25.0343986792255,24.0879072632135,20.8948828057734,18.0811323226889,30.1582567878545,12.5098307278303,13.769399644533,19.0396354950265,20.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=104318 | |||
|HGNC= | |||
|MCL_coexpression_id=526 | |||
|TSSclassifier=NA | |||
|UniProt=Q9DC28,Q3UBT6,A2ABP1,A8Y308 | |||
|association_with_transcript=0bp_to_ENSMUST00000018274,NM_027874,NM_139059,uc007muz.1,uc007mva.1,uc007mvb.1_5end | |||
|cluster_id=chr11:120852619..120852653,- | |||
|description=CAGE_peak_2_at_Csnk1d_5end | |||
|id=chr11:120852619..120852653,- | |||
|ontology_enrichment_celltype=CL:0000540!6.34e-10!33;CL:0000047!6.34e-10!33;CL:0000031!6.34e-10!33;CL:0000404!6.34e-10!33;CL:0000221!1.42e-09!44;CL:0000133!1.42e-09!44;CL:0002319!2.06e-09!43;CL:0000393!1.38e-07!39;CL:0000211!1.38e-07!39;CL:0000117!2.34e-07!23;CL:0000337!2.34e-07!23;CL:0000055!7.73e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.34e-10,33;CL:0000047,6.34e-10,33;CL:0000031,6.34e-10,33;CL:0000404,6.34e-10,33;CL:0000221,1.42e-09,44;CL:0000133,1.42e-09,44;CL:0002319,2.06e-09,43;CL:0000393,1.38e-07,39;CL:0000211,1.38e-07,39;CL:0000117,2.34e-07,23;CL:0000337,2.34e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=28.1861970904437,32.4547129104606,27.2999543633722,30.246421130683,41.0734498556005,24.342494427224,20.0906870912152,20.6597317506522,55.329967805605,61.7930349490063,41.6059662787977,43.4758266524583,19.174481752295,17.8337620934755,14.9899392817048,19.6401009368131,25.1842276126133,19.4009231695316,23.5836825801871,14.429248161133,56.8089178209146,21.7447183129939,15.9331871374751,17.9191513528615,18.1233332043064,21.2465826722557,21.1073378117947,18.3150547783006,16.9120843316173,16.8860186939154,17.5167103417691,28.5763803056834,36.2888224674896,15.8481681015439,19.9307617628379,20.2806267337361,17.3543952823014,20.0895182753716,10.1573594788094,14.1351410872926,17.6469446409304,21.1744100337118,16.0218416500281,11.4566104357775,13.3817549209759,15.4179271815813,24.2541316747892,25.9449936092731,19.552070263368,25.8591765768797,27.7173114818218,28.7505128729943,35.2343472721246,33.3666585325218,30.9206295211067,28.0412785279182,22.6361417551618,27.8462929829819,63.7296851707733,71.4137822017244,64.6508031576303,24.7356508410466,25.789549087223,25.6471419425199,30.6548572395762,31.9716051725745,29.9600110518405,38.806048837477,44.5865332926454,49.5471793677305,44.1682418837902,28.8507494247842,24.5164080456291,47.6489208946171,66.900138770729,43.203282970671,18.7196997698961,22.3452841649078,24.4234387877427,63.964849549144,78.3134229236627,63.5514312079247,20.6595419261022,19.1339287410771,28.1148775909331,30.0521157183141,26.0540175862358,39.3302830691384,19.6130840732947,13.9807386197553,11.3047150593654,5.16254326188832,26.5188820146023,13.4925797909454,12.3457519315057,12.5447528387254,21.487996280158,16.1908806449155,13.5088722393492,12.0135455333516,27.323623436676,20.5322363862909,38.2207859559969,42.6640021891999,16.2368280758411,17.2284708523067,17.1878311305026,20.2105467102736,25.3759125974228,20.0396887737513,31.7478147982029,31.9688752227748,22.1390877365816,26.3764620967089,20.695612455884,20.3579877954074,38.3152199988279,19.0871151134283,22.1152637987469,19.7355556935839,18.3298460322127,15.5160081003271,27.9587641827183,24.8863677459815,21.154117388159,17.1156226989756,15.6957813102756,16.197373736822,11.5633906636489,17.2259235315546,21.0450277296568,31.1622793239904,19.1206752211504,14.8314965251592,19.5320761885986,17.3598151482501,17.720049309955,20.5271501506653,11.8779696463827,15.1518136238261,28.106015679944,31.4965883073858,31.5108727159361,28.9353250244573,18.3698547708585,20.8825364064305,21.6450983732974,20.1788629176432,37.7243987632474,36.6865795525569,28.3281309903958,24.9883134967435,28.6388666702366,23.3328951569852,26.3401134602168,32.6416197582329,22.4708219940235,13.1247432628505,13.924011470384,26.7192246570797,19.7001890384121,24.128316235776,24.6214525008619,21.8408297239618,21.1345944655708,22.3232586960392,21.7301455133692,14.8291984806305,14.9749463421267,18.879258369096,18.0783445287258,21.9299981137998,17.564009223284,17.8494536951294,17.0334858336943,21.4041593748912,17.8426142811251,23.5361004330554,29.6470668243975,32.0486607167405,29.1240462587931,25.0087570532945,20.4587800337281,23.0173007596197,20.404749646414,20.5873693405014,18.8501406600202,16.5133871794155,18.9115164505547,20.6728463990471,18.1555961894743,16.5287256801125,30.7261999543992,28.4478796398225,22.5415471346161,29.7330938654159,25.9896332804618,16.4117818543345,16.4414996523069,12.251642282307,13.5018905943582,9.74837594982224,14.2297261001831,25.6941462802785,23.193961423358,26.084005036643,17.2431103180227,24.8412474544989,17.8238096246994,22.1526025837124,18.159145398804,13.7280706594041,10.0637744569148,18.9791883310937,21.5305994449047,15.6598904327209,16.6839594575378,11.5786445127208,19.7685913478267,30.6976087068185,32.9189252412892,28.5171744102316,26.0506175600237,29.8161138246432,29.0413241880937,22.0501022079313,24.748717624672,16.3883870340093,25.0343986792255,24.0879072632135,20.8948828057734,18.0811323226889,30.1582567878545,12.5098307278303,13.769399644533,19.0396354950265,20.871576698413,19.1055049145291,18.196778936811,25.4995636476417,25.5561657727168,27.3307121007647,35.9757074213774,23.1799734013975,33.1970024382767,31.9876479791381,29.9559919239422,33.9016795177122,34.7853244592941,22.8138134659483,25.9750355931132,28.1343653794263,18.2433394476005,20.2913251256219,15.9294166007955,25.4919667962731,28.7207379116513,16.4086419387631,22.147641966058,23.9799415396263,16.0225541764297,17.4496190149203,18.8943610543902,17.3820216864699,11.5960469432499,5.15677716240934,21.7881347682424,35.2919744301368,36.867224878085,36.8659700254339,36.8867685975929,36.2088699732203,32.4161570586178,26.7929155220847,22.5284839741162,31.5629785587092,17.642271844397,22.0947578941583,16.3079070962865,15.2591700068234,19.0995750405018,18.2196398717018,18.3632927076806,18.913380805072,14.1822831062218,28.6877746468879,23.3345104485837,16.9531611304222,19.4105803363856,22.8778173206523,18.1876920093425,19.7331547776358,19.2097963588149,15.2747298882418,37.1694792457834,2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| |||
|short_description=p2@Csnk1d | |||
}} |
Latest revision as of 03:40, 27 September 2015
Short description: | p2@Csnk1d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Csnk1d_5end |
Coexpression cluster: | MCL_coexpression_mm9:526 |
Association with transcript: | 0bp_to_ENSMUST00000018274, NM_027874, NM_139059, uc007muz.1, uc007mva.1, uc007mvb.1_5end |
EntrezGene: | Csnk1d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.34e-10 | 33 |
neuronal stem cell | 6.34e-10 | 33 |
neuroblast | 6.34e-10 | 33 |
electrically signaling cell | 6.34e-10 | 33 |
ectodermal cell | 1.42e-09 | 44 |
neurectodermal cell | 1.42e-09 | 44 |
neural cell | 2.06e-09 | 43 |
electrically responsive cell | 1.38e-07 | 39 |
electrically active cell | 1.38e-07 | 39 |
CNS neuron (sensu Vertebrata) | 2.34e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.34e-07 | 23 |