FFCP PHASE1:Hg19::chr9:2017159..2017186,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:2017159..2017186,+
|short_description=p12@SMARCA2
|description=CAGE_peak_12_at_SMARCA2_5end
|association_with_transcript=72bp_to_ENST00000457226_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6595 | |EntrezGene=6595 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11098 | |HGNC=11098 | ||
|TSSclassifier=strong | |||
|UniProt=F6RS74 | |UniProt=F6RS74 | ||
|association_with_transcript=72bp_to_ENST00000457226_5end | |||
|cluster_id=chr9:2017159..2017186,+ | |||
|description=CAGE_peak_12_at_SMARCA2_5end | |||
|id=chr9:2017159..2017186,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;6.12e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.00e-09,5;CL:0002028,3.00e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.37e-16!115;UBERON:0003080!1.07e-08!42;UBERON:0002780!3.38e-08!41;UBERON:0001890!3.38e-08!41;UBERON:0006240!3.38e-08!41;UBERON:0001049!5.14e-08!57;UBERON:0005068!5.14e-08!57;UBERON:0006241!5.14e-08!57;UBERON:0007135!5.14e-08!57;UBERON:0001869!7.67e-08!32;UBERON:0001893!9.26e-08!34;UBERON:0002791!2.29e-07!33;UBERON:0001950!3.37e-07!20;UBERON:0002020!6.08e-07!34;UBERON:0003528!6.08e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.91e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.03e-12,114;UBERON:0001950,1.54e-07,20 | |||
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| ||
|short_description=p12@SMARCA2 | |||
}} | }} |
Latest revision as of 21:41, 16 September 2015
Short description: | p12@SMARCA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SMARCA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 72bp_to_ENST00000457226_5end |
EntrezGene: | SMARCA2 |
HGNC: | 11098 |
UniProt: | F6RS74 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.00e-09 | 5 |
basophil mast progenitor cell | 3.00e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.03e-12 | 114 |
neocortex | 1.54e-07 | 20 |