FFCP PHASE1:Hg19::chr2:48796087..48796104,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=286749 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30651 | |||
|TSSclassifier=strong | |||
|UniProt=Q53S48,Q3MIM1 | |||
|association_with_transcript=-54bp_to_ENST00000394754,NM_172311,uc002rwp.1_5end | |||
|cluster_id=chr2:48796087..48796104,+ | |||
|description=CAGE_peak_2_at_STON1-GTF2A1L_5end | |||
|id=chr2:48796087..48796104,+ | |||
|ontology_enrichment_celltype=CL:0000136!3.26e-10!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;6.91e-26;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.02e-22,15 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.33e-08;1!UBERON:0003124;4.89e-08;1!UBERON:0010115;4.89e-08;1!UBERON:0005062;8.68e-08;4!UBERON:0007284;8.68e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;3.67e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.47e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.95e-20!115;UBERON:0002298!6.54e-14!8;UBERON:0003076!3.66e-11!15;UBERON:0003057!3.66e-11!15;UBERON:0004733!9.25e-09!12;UBERON:0002028!9.25e-09!12;UBERON:0007277!9.25e-09!12;UBERON:0004732!5.32e-08!13;UBERON:0001896!5.78e-08!3;UBERON:0005290!5.78e-08!3;UBERON:0010096!5.78e-08!3;UBERON:0000988!1.17e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002133;1.07e-14;2!UBERON:0003978;4.21e-10;3!UBERON:0000946;4.21e-10;3!UBERON:0001282;9.79e-09;1!UBERON:0009842;9.79e-09;1!UBERON:0003704;9.79e-09;1!UBERON:0001171;9.79e-09;1!UBERON:0001172;9.79e-09;1!UBERON:0007029;2.33e-08;1!UBERON:0002134;2.33e-08;1!UBERON:0005208;2.33e-08;1!UBERON:0004145;2.33e-08;1!UBERON:0005946;2.33e-08;1!UBERON:0005965;2.33e-08;1!UBERON:0002078;2.33e-08;1!UBERON:0002363;4.89e-08;1!UBERON:0002135;4.89e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002133,8.41e-15,2;UBERON:0003978,3.58e-10,3;UBERON:0009751,3.58e-10,3;UBERON:0000946,3.58e-10,3;UBERON:0002523,3.58e-10,3;UBERON:0005983,3.58e-10,3;UBERON:0002165,3.58e-10,3;UBERON:0002062,3.58e-10,3;UBERON:0007280,3.58e-10,3;UBERON:0001282,9.79e-09,1;UBERON:0009842,9.79e-09,1;UBERON:0003704,9.79e-09,1;UBERON:0001171,9.79e-09,1;UBERON:0001172,9.79e-09,1;UBERON:0002134,1.75e-08,1;UBERON:0005208,1.75e-08,1;UBERON:0005946,1.75e-08,1;UBERON:0005965,1.75e-08,1;UBERON:0002078,1.75e-08,1;UBERON:0007029,2.50e-08,1;UBERON:0002363,3.33e-08,1;UBERON:0007645,3.33e-08,1;UBERON:0007647,3.33e-08,1;UBERON:0010115,3.33e-08,1;UBERON:0002135,5.07e-08,1 | |||
|phase1_expression=0,4.28201047781966,1.69145284915165,0,0.893922188854576,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.520237390239513,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0,0,0,0,0.795285947051099,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12318871245384,0,0,2.50634477090067,0,2.40882112655549,2.62339619348362,0,0,0,0,0,0,0,0,0.270455678475983,0,1.4098700508785,0,1.75809815126273,0,0.445773537109913,0,0,0,0,0,0,0,6.9217627175239,0,0.19924798825107,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,24.3835999512583,0,0,0,0.31900115973192,0,1.06606955203727,0,9.88975615288656,0.332423363800313,0,0,0,0,0.476809736941136,0,0,0,0,0,0.619202951523374,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,1.76922422959766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84167259326905,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39641200636127,0,2.87149209830726,0.399358000997982,0,0.669514372325618,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.775697738169303,0.39669780522807,0,0,0.427149650270779,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,3.80812462358632,2.506898940227,3.982492497925,12.4591599669726,0,0,0,0,1.14681839138014,0.887432412294818,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0.672567444437648,0,0.227662191351298,1.50794029276486,0.115233987555779,0.171488009437418,0.271878931907327,0,0,0,0,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,2.4285549652957,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.392616934229891,0.594092800654172,0,0,2.06764619555678,0.773494655682926,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.318235791390825,0,0,0,0.134704106029175,1.43444410785353,0,0,0,0,0,2.34640942403454,0,0,0.665756774185513,0,0 | |||
|short_description=p2@STON1-GTF2A1L | |||
}} |
Latest revision as of 12:59, 17 September 2015
Short description: | p2@STON1-GTF2A1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_STON1-GTF2A1L_5end |
Coexpression cluster: | NA |
Association with transcript: | -54bp_to_ENST00000394754, NM_172311, uc002rwp.1_5end |
EntrezGene: | STON1-GTF2A1L |
HGNC: | 30651 |
UniProt: | Q53S48Q3MIM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.02e-22 | 15 |
Ontology term | p-value | n |
---|---|---|
atrioventricular valve | 8.41e-15 | 2 |
valve | 3.58e-10 | 3 |
cardiac mesenchyme | 3.58e-10 | 3 |
cardial valve | 3.58e-10 | 3 |
tunica intima | 3.58e-10 | 3 |
heart layer | 3.58e-10 | 3 |
endocardium | 3.58e-10 | 3 |
endocardial cushion | 3.58e-10 | 3 |
presumptive endocardium | 3.58e-10 | 3 |
intralobular bile duct | 9.79e-09 | 1 |
acinus | 9.79e-09 | 1 |
intrahepatic bile duct | 9.79e-09 | 1 |
portal lobule | 9.79e-09 | 1 |
hepatic acinus | 9.79e-09 | 1 |
tricuspid valve | 1.75e-08 | 1 |
right atrium valve | 1.75e-08 | 1 |
outflow tract of atrium | 1.75e-08 | 1 |
outflow part of right atrium | 1.75e-08 | 1 |
right cardiac atrium | 1.75e-08 | 1 |
surface | 2.50e-08 | 1 |
dura mater | 3.33e-08 | 1 |
future meninx | 3.33e-08 | 1 |
ectomeninx | 3.33e-08 | 1 |
future dura mater | 3.33e-08 | 1 |
mitral valve | 5.07e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.47e-07 | 31 |