FFCP PHASE1:Hg19::chr2:47083051..47083064,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=224bp_to_ENST00000495449_5end | |||
|cluster_id=chr2:47083051..47083064,+ | |||
|description=CAGE_peak_1_at_ENST00000495449_5end | |||
|id=chr2:47083051..47083064,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.39e-22!180;CL:0000057!5.65e-17!75;CL:0000680!1.05e-13!57;CL:0000056!1.05e-13!57;CL:0000355!1.05e-13!57;CL:0002620!3.05e-12!23;CL:0000723!2.80e-11!436;CL:0000048!3.14e-11!430;CL:0000187!8.88e-11!54;CL:0000034!1.11e-10!444;CL:0000183!2.14e-10!59;CL:0000188!9.10e-10!9;CL:0000393!4.10e-09!60;CL:0000211!4.10e-09!60;CL:0002371!8.46e-09!591;CL:0000144!1.64e-08!625;CL:0002334!2.18e-08!12;CL:0000548!4.36e-07!679;CL:0000004!4.36e-07!679;CL:0000255!4.36e-07!679;CL:0000012!6.13e-07!682;CL:0000594!6.92e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000346;8.07e-15;3!CL:1000428;8.07e-15;3!CL:0002601;9.60e-12;1!CL:0002559;2.91e-09;5!CL:0000680;5.18e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,5.68e-15,3;CL:1000428,5.68e-15,3;CL:0002601,1.47e-11,1;CL:0002559,2.36e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;2.04e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.81e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.84e-19!83;UBERON:0002329!3.84e-19!83;UBERON:0003077!3.84e-19!83;UBERON:0003059!3.84e-19!83;UBERON:0007282!3.84e-19!83;UBERON:0009618!3.84e-19!83;UBERON:0007285!3.84e-19!83;UBERON:0004290!4.79e-17!70;UBERON:0000486!3.22e-14!82;UBERON:0002199!1.41e-12!45;UBERON:0002416!1.41e-12!45;UBERON:0001134!2.43e-12!61;UBERON:0002036!2.43e-12!61;UBERON:0003082!2.43e-12!61;UBERON:0002385!9.98e-12!63;UBERON:0001015!9.98e-12!63;UBERON:0000383!9.98e-12!63;UBERON:0005256!4.83e-11!143;UBERON:0002097!3.41e-10!40;UBERON:0003102!3.87e-09!95;UBERON:0002100!9.11e-09!216;UBERON:0000475!1.29e-08!365;UBERON:0002067!4.61e-07!9;UBERON:0004016!4.61e-07!9;UBERON:0010083!4.61e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;8.07e-15;3!UBERON:0001992;8.07e-15;3!UBERON:0002073;2.91e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,5.68e-15,3;UBERON:0001992,5.68e-15,3;UBERON:0002073,2.36e-09,5;UBERON:0005086,2.36e-09,5;UBERON:0002329,1.35e-08,71;UBERON:0003059,1.35e-08,71;UBERON:0007282,1.35e-08,71;UBERON:0004290,1.35e-08,71;UBERON:0009618,1.35e-08,71;UBERON:0003077,1.83e-08,72;UBERON:0007285,1.83e-08,72;UBERON:0007524,2.46e-08,73;UBERON:0007503,9.68e-08,78;UBERON:0000486,3.23e-07,83 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,1.0007329835313,0,0,0,0.631719873426831,0,0.491467873003018,0,0.218441372130172,0,0.247532705920093,0.331397375727916,0,0,0.730310090387373,0,0.246242116153576,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0.624320153660641,0.570471821544449,0,0.117434498643765,0.161872944368132,0,1.42907919878425,0.859840221182376,0,0,0,0,0,0.673344455816265,0.500474079487857,3.3247693858102,0,0,0,0.226864366320042,0.358779271377724,0,0,0,0.515262646192195,0.257640540045629,0.744467425326359,0.168776332241266,0.292311015483596,0,0,0.484938170456436,0,1.0075209822764,0.508681776931463,0,0,0,0,0,0,0,0,0,1.56449532329816,0,1.38134921352481,0.464367928031979,0,0,0,0,0.110293972732394,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.4400297149257,0,0,0.845302752556,0.26593811658487,0,1.28603687131071,0,0.532844358032199,0,0,0,0,0.355391948742546,0,0,0.871533458600294,0,0,0,0,0,0,0,6.08081488003833,0.410952645100767,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0.117141414992713,0.902838299183157,0,0,0,0,0.781952530212746,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0.321707842287215,0,1.3878872442239,0.532685175939381,1.14978018419333,0,0.348631135379878,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0.770243085573222,0.460511024178389,0.827019434907183,0.644521469209642,0.580066775656914,1.36362603865761,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,2.12922412126809,1.73986598415015,0.55597265731176,0.143124886741991,0.372158369359667,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0,0.606547444719948,0,0,0,0.487426979262569,0,0.136499911407986,0,0,0,0,2.19225442626881,0,0,0,0,0,0.143411352204052,0,0,1.06428319221179,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.627865836814451,0,0,0,0,0.0979923974143777,0.435296032902013,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,1.19271615249795,0.453248366080503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0.568209015825267,0,0,0,0,0.15543720058278,0,0.159296767163702,0,0.465788870628778,1.65882483136342,3.19010057469594,0,0.300515217994437,2.28483127301277,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000495449 | |||
}} |
Latest revision as of 10:31, 29 July 2015
Short description: | p1@ENST00000495449 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000495449_5end |
Coexpression cluster: | NA |
Association with transcript: | 224bp_to_ENST00000495449_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 5.68e-15 | 3 |
stem cell of epidermis | 5.68e-15 | 3 |
uterine smooth muscle cell | 1.47e-11 | 1 |
hair follicle cell | 2.36e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 5.68e-15 | 3 |
papillary layer of dermis | 5.68e-15 | 3 |
hair follicle | 2.36e-09 | 5 |
hair follicle placode | 2.36e-09 | 5 |
somite | 1.35e-08 | 71 |
presomitic mesoderm | 1.35e-08 | 71 |
presumptive segmental plate | 1.35e-08 | 71 |
dermomyotome | 1.35e-08 | 71 |
trunk paraxial mesoderm | 1.35e-08 | 71 |
paraxial mesoderm | 1.83e-08 | 72 |
presumptive paraxial mesoderm | 1.83e-08 | 72 |
dense mesenchyme tissue | 2.46e-08 | 73 |
epithelial vesicle | 9.68e-08 | 78 |
multilaminar epithelium | 3.23e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.81e-07 | 14 |