FFCP PHASE1:Mm9::chr11:115443079..115443090,+: Difference between revisions
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{{FFCP|EntrezGene=445007|HGNC=|MCL_coexpression_id=58|UniProt=|association_with_transcript=17bp_to_ENSMUST00000128745_5end|description=CAGE_peak_2_at_Nup85_5end|id=chr11:115443079..115443090,+|ontology_enrichment_celltype=CL:0000239!1.56e-13!6;CL:0000677!1.56e-13!6;CL:0000212!1.56e-13!6;CL:0000584!1.56e-13!6;CL:0000075!1.49e-11!7;CL:0000473!7.67e-11!3;CL:0000627!7.67e-11!3;CL:0000682!7.67e-11!3;CL:0000066!5.14e-09!25;CL:0002563!6.60e-09!9;CL:0002251!6.60e-09!9|ontology_enrichment_celltype_v019_2=CL:0000682,1.68e-27,3;CL:0000239,9.58e-24,6;CL:0000677,9.58e-24,6;CL:0000584,9.58e-24,6;CL:0000075,2.01e-20,7;CL:0000066,3.91e-17,25;CL:0002563,5.53e-16,9;CL:0002251,5.53e-16,9;CL:0000473,3.41e-12,7;CL:0002076,9.79e-10,15;CL:0000223,2.25e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!4.41e-16!15;UBERON:0004923!1.38e-11!24;UBERON:0001242!2.50e-11!13;UBERON:0000060!2.50e-11!13;UBERON:0001262!2.50e-11!13;UBERON:0004786!2.50e-11!13;UBERON:0000485!6.80e-10!11;UBERON:0003350!6.60e-09!9;UBERON:0004808!6.60e-09!9;UBERON:0001277!6.60e-09!9;UBERON:0000064!3.03e-08!99;UBERON:0001962!1.44e-07!2;UBERON:0001961!1.44e-07!2;UBERON:0001744!1.44e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.12e-28,15;UBERON:0001962,2.38e-18,2;UBERON:0001961,2.38e-18,2;UBERON:0001744,2.38e-18,2;UBERON:0004923,1.59e-17,24;UBERON:0001242,7.31e-17,13;UBERON:0001262,7.31e-17,13;UBERON:0004786,7.31e-17,13;UBERON:0003350,5.53e-16,9;UBERON:0004808,5.53e-16,9;UBERON:0001277,5.53e-16,9;UBERON:0000485,3.77e-13,11;UBERON:0002465,1.42e-12,3;UBERON:0003199,4.59e-10,1;UBERON:0000160,4.01e-07,31|phase1_expression=0.160148847104794,13.6100408979351,18.654968814971,0.30246421130683,0,2.68606835059024,2.80335168714631,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0,0,0.261199789138935,2.87986361028132,4.12936705920906,22.3950466004858,7.75371593086335,7.75696437669201,0,0,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39736270956253,0.240390899039938,0.295379054349154,0,0.0762068066549998,0,0.194915761479505,0,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@Nup85}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=445007 | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=17bp_to_ENSMUST00000128745_5end | |||
|cluster_id=chr11:115443079..115443090,+ | |||
|description=CAGE_peak_2_at_Nup85_5end | |||
|id=chr11:115443079..115443090,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.56e-13!6;CL:0000677!1.56e-13!6;CL:0000212!1.56e-13!6;CL:0000584!1.56e-13!6;CL:0000075!1.49e-11!7;CL:0000473!7.67e-11!3;CL:0000627!7.67e-11!3;CL:0000682!7.67e-11!3;CL:0000066!5.14e-09!25;CL:0002563!6.60e-09!9;CL:0002251!6.60e-09!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.68e-27,3;CL:0000239,9.58e-24,6;CL:0000677,9.58e-24,6;CL:0000584,9.58e-24,6;CL:0000075,2.01e-20,7;CL:0000066,3.91e-17,25;CL:0002563,5.53e-16,9;CL:0002251,5.53e-16,9;CL:0000473,3.41e-12,7;CL:0002076,9.79e-10,15;CL:0000223,2.25e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.41e-16!15;UBERON:0004923!1.38e-11!24;UBERON:0001242!2.50e-11!13;UBERON:0000060!2.50e-11!13;UBERON:0001262!2.50e-11!13;UBERON:0004786!2.50e-11!13;UBERON:0000485!6.80e-10!11;UBERON:0003350!6.60e-09!9;UBERON:0004808!6.60e-09!9;UBERON:0001277!6.60e-09!9;UBERON:0000064!3.03e-08!99;UBERON:0001962!1.44e-07!2;UBERON:0001961!1.44e-07!2;UBERON:0001744!1.44e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.12e-28,15;UBERON:0001962,2.38e-18,2;UBERON:0001961,2.38e-18,2;UBERON:0001744,2.38e-18,2;UBERON:0004923,1.59e-17,24;UBERON:0001242,7.31e-17,13;UBERON:0001262,7.31e-17,13;UBERON:0004786,7.31e-17,13;UBERON:0003350,5.53e-16,9;UBERON:0004808,5.53e-16,9;UBERON:0001277,5.53e-16,9;UBERON:0000485,3.77e-13,11;UBERON:0002465,1.42e-12,3;UBERON:0003199,4.59e-10,1;UBERON:0000160,4.01e-07,31 | |||
|phase1_expression=0.160148847104794,13.6100408979351,18.654968814971,0.30246421130683,0,2.68606835059024,2.80335168714631,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0,0,0.261199789138935,2.87986361028132,4.12936705920906,22.3950466004858,7.75371593086335,7.75696437669201,0,0,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39736270956253,0.240390899039938,0.295379054349154,0,0.0762068066549998,0,0.194915761479505,0,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@Nup85 | |||
}} |
Latest revision as of 23:18, 26 September 2015
Short description: | p2@Nup85 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nup85_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | 17bp_to_ENSMUST00000128745_5end |
EntrezGene: | Nup85 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.68e-27 | 3 |
brush border epithelial cell | 9.58e-24 | 6 |
gut absorptive cell | 9.58e-24 | 6 |
enterocyte | 9.58e-24 | 6 |
columnar/cuboidal epithelial cell | 2.01e-20 | 7 |
epithelial cell | 3.91e-17 | 25 |
intestinal epithelial cell | 5.53e-16 | 9 |
epithelial cell of alimentary canal | 5.53e-16 | 9 |
defensive cell | 3.41e-12 | 7 |
endo-epithelial cell | 9.79e-10 | 15 |
endodermal cell | 2.25e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.12e-28 | 15 |
gut-associated lymphoid tissue | 2.38e-18 | 2 |
mucosa-associated lymphoid tissue | 2.38e-18 | 2 |
lymphoid tissue | 2.38e-18 | 2 |
organ component layer | 1.59e-17 | 24 |
intestinal mucosa | 7.31e-17 | 13 |
wall of intestine | 7.31e-17 | 13 |
gastrointestinal system mucosa | 7.31e-17 | 13 |
epithelium of mucosa | 5.53e-16 | 9 |
gastrointestinal system epithelium | 5.53e-16 | 9 |
intestinal epithelium | 5.53e-16 | 9 |
simple columnar epithelium | 3.77e-13 | 11 |
lymphoid system | 1.42e-12 | 3 |
egg chamber | 4.59e-10 | 1 |
intestine | 4.01e-07 | 31 |