FFCP PHASE1:Hg19::chr2:45006189..45006201,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:45006189..45006201,+ | |||
|coexpression_cluster_id=C342 | |||
|description=CAGE_peak_at_chr2:45006189..45006201,+ | |||
|id=chr2:45006189..45006201,+ | |||
|ontology_enrichment_celltype=CL:0000945!2.89e-45!24;CL:0000826!2.89e-45!24;CL:0000542!6.74e-22!53;CL:0000051!6.74e-22!53;CL:0000838!2.60e-19!52;CL:0000236!1.29e-14!14;CL:0002087!1.63e-10!119;CL:0002031!1.25e-08!124;CL:0000738!2.01e-08!140;CL:0002032!1.21e-07!165;CL:0000837!1.21e-07!165;CL:0000037!3.48e-07!172;CL:0000566!3.48e-07!172;CL:0000819!3.60e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.31e-33;24!CL:0002032;4.59e-23;1!CL:0000557;4.59e-23;1!CL:0000542;1.06e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.96e-33,24;CL:0000826,3.96e-33,24;CL:0000542,2.57e-20,53;CL:0000051,2.57e-20,53;CL:0000838,2.30e-15,52;CL:0002087,3.21e-09,115;CL:0002032,1.66e-08,161;CL:0000837,1.66e-08,161;CL:0000037,3.86e-08,168;CL:0000738,8.99e-08,136;CL:0000988,1.04e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;1.06e-08;53 | |||
|ontology_enrichment_disease=DOID:0060058!3.31e-14!10;DOID:630!1.55e-07!1;DOID:0050177!1.55e-07!1;DOID:0050427!1.55e-07!1;DOID:2355!1.86e-07!1;DOID:12603!2.10e-07!1;DOID:0060073!3.60e-07!1;DOID:8675!3.60e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:630;1.34e-23;1!DOID:0050177;1.34e-23;1!DOID:0050427;1.34e-23;1!DOID:2355;2.34e-23;1!DOID:12603;4.59e-23;1!DOID:74;2.19e-12;2!DOID:1287;7.91e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.34e-23,1;DOID:0050177,1.34e-23,1;DOID:0050427,1.34e-23,1;DOID:2355,2.62e-23,1;DOID:12603,4.10e-23,1;DOID:74,2.32e-12,2;DOID:1287,8.14e-07,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89708369314551,2.79142004129816,3.30585281517453,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,1.75996244461323,0,0,0.426730222566507,0.400395987036012,0,0.661044872784862,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,1.67222857613147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03215996957883,0,0,0.160753148465019,0,0,0,0,0,0,0.709251365692784,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730755590285376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571812353413251,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0,0.380095503034311,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8468219076388 | |||
|short_description=p@chr2:45006189..45006201,+ | |||
}} |
Latest revision as of 10:22, 29 July 2015
Short description: | p@chr2:45006189..45006201, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:45006189..45006201, + |
Coexpression cluster: | C342_xeroderma_b_B_splenic_plasma_Burkitt_thymus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.96e-33 | 24 |
pro-B cell | 3.96e-33 | 24 |
lymphocyte | 2.57e-20 | 53 |
common lymphoid progenitor | 2.57e-20 | 53 |
lymphoid lineage restricted progenitor cell | 2.30e-15 | 52 |
nongranular leukocyte | 3.21e-09 | 115 |
hematopoietic oligopotent progenitor cell | 1.66e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.66e-08 | 161 |
hematopoietic stem cell | 3.86e-08 | 168 |
leukocyte | 8.99e-08 | 136 |
hematopoietic cell | 1.04e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.34e-23 | 1 |
monogenic disease | 1.34e-23 | 1 |
xeroderma pigmentosum | 1.34e-23 | 1 |
anemia | 2.62e-23 | 1 |
acute leukemia | 4.10e-23 | 1 |
hematopoietic system disease | 2.32e-12 | 2 |
cardiovascular system disease | 8.14e-07 | 4 |