FFCP PHASE1:Hg19::chr9:16728047..16728061,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:16728047..16728061,-
|short_description=p8@BNC2
|description=CAGE_peak_8_at_BNC2_5end
|association_with_transcript=-51bp_to_ENST00000468187_5end
|EntrezGe...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54796 | |EntrezGene=54796 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30988 | |HGNC=30988 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-51bp_to_ENST00000468187_5end | |||
|cluster_id=chr9:16728047..16728061,- | |||
|description=CAGE_peak_8_at_BNC2_5end | |||
|id=chr9:16728047..16728061,- | |||
|ontology_enrichment_celltype=CL:0000393!2.89e-13!60;CL:0000211!2.89e-13!60;CL:0000055!8.05e-13!180;CL:0000187!9.11e-13!54;CL:0000183!1.66e-12!59;CL:0000680!3.34e-12!57;CL:0000056!3.34e-12!57;CL:0000355!3.34e-12!57;CL:0000710!1.30e-07!20;CL:0000188!3.75e-07!9;CL:0000133!4.16e-07!59;CL:0000222!4.77e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000188;2.43e-14;9!CL:0000594;5.68e-12;3!CL:0002549;4.42e-09;2!CL:0000077;7.02e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,4.81e-14,9;CL:0000594,8.98e-12,3;CL:0002549,3.51e-09,2;CL:0000077,5.69e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!1.24e-10!61;UBERON:0002036!1.24e-10!61;UBERON:0003082!1.24e-10!61;UBERON:0002385!6.19e-10!63;UBERON:0001015!6.19e-10!63;UBERON:0000383!6.19e-10!63;UBERON:0004290!7.32e-08!70;UBERON:0000914!5.62e-07!83;UBERON:0002329!5.62e-07!83;UBERON:0003077!5.62e-07!83;UBERON:0003059!5.62e-07!83;UBERON:0007282!5.62e-07!83;UBERON:0009618!5.62e-07!83;UBERON:0007285!5.62e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0005629;4.42e-09;2!UBERON:0005358;4.42e-09;2!UBERON:0001886;4.42e-09;2!UBERON:0004086;4.42e-09;2!UBERON:0005282;4.42e-09;2!UBERON:0005281;4.42e-09;2!UBERON:0001134;8.67e-08;16!UBERON:0002036;8.67e-08;16!UBERON:0005284;1.39e-07;5!UBERON:0002050;4.01e-07;5!UBERON:0005423;4.01e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,3.51e-09,2;UBERON:0005358,3.51e-09,2;UBERON:0001886,3.51e-09,2;UBERON:0004086,3.51e-09,2;UBERON:0005282,3.51e-09,2;UBERON:0005281,3.51e-09,2;UBERON:0005284,1.20e-07,5 | |||
|phase1_expression=0,0,0.281908808191942,1.0007329835313,0,0,0,0,0,0,0,0.436882744260345,0,0.618831764800233,0.331397375727916,0.672325146451775,0.602694528023977,0,0,1.10808952269109,0.204000691244253,2.19418305034661,0.286235987131057,0,0,0.993374274723366,1.23150884174919,0.944529375764151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.383587685530591,0,0,0,0.795285947051099,0,0.472674085820339,0.443458794925128,0.790513071238134,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.550236083880135,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0.379891534993739,0.926864265692532,2.0078563452417,1.06400514659507,0,0,0,1.55605517699883,0,0,2.4217188423189,2.88087962239999,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0,0.423863802319124,0.300091096084402,0.206105058476878,0.515281080091258,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0.121973706129595,0.530119073285941,0.116193942869518,0.10366105501537,0.504641701751257,0.72995471815166,0,0,0,0.464367928031979,0,0.118306800039844,0,0.723033089650446,0.110293972732394,0,0,0.134831308160164,0,0,0,0,1.6462960453256,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,1.52795370223311,5.86087236050235,0,0.514137463516618,0.600686115687835,2.85826432630578,0.336393253036082,0.43596006883328,0.4400297149257,0,0,0,0.26593811658487,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,5.72734816413214,1.74306691720059,2.69927076191554,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0.981531933753119,0.500170521059677,0,0,0.178428988797162,0,0.117141414992713,0.601892199455438,0,0,0.664225598535437,0.368738337083406,0.0868836144680828,0.391602314925481,0.686286847621712,0,0,0,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0.160853921143607,0,0,0.355123450626254,0.164254312027618,0,0.348631135379878,0,0,0,0.229628896329213,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,1.6068392984416,0.676695028044854,1.3864375540318,1.38153307253517,0.413509717453592,1.6113036730241,2.0302337147992,1.02271952899321,1.06838442776085,0,0,0,0,0.464845549297286,0.62962469366128,0,0.308033580176089,0,0,0,0.143124886741991,1.48863347743867,0.316379424718726,0.953150969619124,0,0.855877976067841,0.636406495851874,0,0.179872457583315,0.274537029736055,0.235624804691373,0.202182481573316,0,0,0.48763373908959,0,1.05650146756755,0.272999822815972,1.41405431953713,0,2.2054613741845,0.66343897524122,0.438450885253763,0.578775534266688,0,0,0,0,0.286822704408103,0.392996164052485,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.485442086998054,0,0,0,0,0.307160702099232,0,0,0.222617410045812,0,21.3236662209273,0,0.276283915531148,0,0.20453736500431,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,22.3976243463947,0,0,0,0.110579259931225,0,0,0.10893846351899,0,0.615602068030377,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,1.51647791108371,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0.0821154570532092,0.290967049465258,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0.577901179803038,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0,2.03215996957883,0,0,0.643012593860077,0.962776056180637,0.83088067605837,0,0,0,0,0.551639951094387,0.157363764404994,0,0.179287339332845,0,0,0,0,0.542999601753713,1.72844298240254,0.326587360109409,0,0,1.70388021785422,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909894705249887,0.285465333544967,0.235265819698172,0,0,0.74627401443437,0.701139929541673,0.554805861502613,0,1.50940741051545,1.77962244319307,0,0.453692771289717,0.310874401165561,0.147855149989634,0.955780602982214,0,1.24210365501008,0.414706207840855,0.265841714557995,0,1.80309130796662,1.52322084867518,1.22061219961398,0,0.751873899297419,0,0,0,0.343395705182793,1.01024846629776,0,0,2.14441591374926,0,0.906823702049089,0.231522474323834,0,0,11.116852097795,0.438568099157414,0,0.38582807654183,0.168942440653073,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0.344429959321631,0,0,0,0.622077260032973,0,0.323474434190045,0,0,0,1.48802444071178,0.123935764259002,1.67593475391973,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,4.88867134270172,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0.496211178389294,1.93458368795583,0,0,0,0,0,0,0,2.7438081509987,0,0,0,0,0.156986185701028,0,0,0.913158720509496,0,0,0.78624198594322,0,0.813689977576877,0,0.801711364730253,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,1.07028081699812,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0.788857810965923,0.0679914901909147,0.872701380680755,0,0,0.462175628631418,0,0,0.437062287854782,0,0,0,0.0918948995348449,0.50141507858475,0.227336094654718,0,0,0,0,0.23806443146374,0.193766729508018,0.248298857183432,0.112131862580613,0.12729431655633,0,0,0,0,0.0717222053926763,0.665320713092027,0,0,0,0,0,2.68931177202306,1.22068853494722,0,0.201273793591026,0 | |phase1_expression=0,0,0.281908808191942,1.0007329835313,0,0,0,0,0,0,0,0.436882744260345,0,0.618831764800233,0.331397375727916,0.672325146451775,0.602694528023977,0,0,1.10808952269109,0.204000691244253,2.19418305034661,0.286235987131057,0,0,0.993374274723366,1.23150884174919,0.944529375764151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.383587685530591,0,0,0,0.795285947051099,0,0.472674085820339,0.443458794925128,0.790513071238134,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.550236083880135,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0.379891534993739,0.926864265692532,2.0078563452417,1.06400514659507,0,0,0,1.55605517699883,0,0,2.4217188423189,2.88087962239999,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0,0.423863802319124,0.300091096084402,0.206105058476878,0.515281080091258,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0.121973706129595,0.530119073285941,0.116193942869518,0.10366105501537,0.504641701751257,0.72995471815166,0,0,0,0.464367928031979,0,0.118306800039844,0,0.723033089650446,0.110293972732394,0,0,0.134831308160164,0,0,0,0,1.6462960453256,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,1.52795370223311,5.86087236050235,0,0.514137463516618,0.600686115687835,2.85826432630578,0.336393253036082,0.43596006883328,0.4400297149257,0,0,0,0.26593811658487,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,5.72734816413214,1.74306691720059,2.69927076191554,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0.981531933753119,0.500170521059677,0,0,0.178428988797162,0,0.117141414992713,0.601892199455438,0,0,0.664225598535437,0.368738337083406,0.0868836144680828,0.391602314925481,0.686286847621712,0,0,0,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0.160853921143607,0,0,0.355123450626254,0.164254312027618,0,0.348631135379878,0,0,0,0.229628896329213,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,1.6068392984416,0.676695028044854,1.3864375540318,1.38153307253517,0.413509717453592,1.6113036730241,2.0302337147992,1.02271952899321,1.06838442776085,0,0,0,0,0.464845549297286,0.62962469366128,0,0.308033580176089,0,0,0,0.143124886741991,1.48863347743867,0.316379424718726,0.953150969619124,0,0.855877976067841,0.636406495851874,0,0.179872457583315,0.274537029736055,0.235624804691373,0.202182481573316,0,0,0.48763373908959,0,1.05650146756755,0.272999822815972,1.41405431953713,0,2.2054613741845,0.66343897524122,0.438450885253763,0.578775534266688,0,0,0,0,0.286822704408103,0.392996164052485,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.485442086998054,0,0,0,0,0.307160702099232,0,0,0.222617410045812,0,21.3236662209273,0,0.276283915531148,0,0.20453736500431,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,22.3976243463947,0,0,0,0.110579259931225,0,0,0.10893846351899,0,0.615602068030377,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,1.51647791108371,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0.0821154570532092,0.290967049465258,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0.577901179803038,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0,2.03215996957883,0,0,0.643012593860077,0.962776056180637,0.83088067605837,0,0,0,0,0.551639951094387,0.157363764404994,0,0.179287339332845,0,0,0,0,0.542999601753713,1.72844298240254,0.326587360109409,0,0,1.70388021785422,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909894705249887,0.285465333544967,0.235265819698172,0,0,0.74627401443437,0.701139929541673,0.554805861502613,0,1.50940741051545,1.77962244319307,0,0.453692771289717,0.310874401165561,0.147855149989634,0.955780602982214,0,1.24210365501008,0.414706207840855,0.265841714557995,0,1.80309130796662,1.52322084867518,1.22061219961398,0,0.751873899297419,0,0,0,0.343395705182793,1.01024846629776,0,0,2.14441591374926,0,0.906823702049089,0.231522474323834,0,0,11.116852097795,0.438568099157414,0,0.38582807654183,0.168942440653073,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0.344429959321631,0,0,0,0.622077260032973,0,0.323474434190045,0,0,0,1.48802444071178,0.123935764259002,1.67593475391973,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,4.88867134270172,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0.496211178389294,1.93458368795583,0,0,0,0,0,0,0,2.7438081509987,0,0,0,0,0.156986185701028,0,0,0.913158720509496,0,0,0.78624198594322,0,0.813689977576877,0,0.801711364730253,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,1.07028081699812,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0.788857810965923,0.0679914901909147,0.872701380680755,0,0,0.462175628631418,0,0,0.437062287854782,0,0,0,0.0918948995348449,0.50141507858475,0.227336094654718,0,0,0,0,0.23806443146374,0.193766729508018,0.248298857183432,0.112131862580613,0.12729431655633,0,0,0,0,0.0717222053926763,0.665320713092027,0,0,0,0,0,2.68931177202306,1.22068853494722,0,0.201273793591026,0 | ||
|short_description=p8@BNC2 | |||
}} | }} |
Latest revision as of 20:08, 16 September 2015
Short description: | p8@BNC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_BNC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -51bp_to_ENST00000468187_5end |
EntrezGene: | BNC2 |
HGNC: | 30988 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 4.81e-14 | 9 |
skeletal muscle satellite cell | 8.98e-12 | 3 |
fibroblast of choroid plexus | 3.51e-09 | 2 |
mesothelial cell | 5.69e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 3.51e-09 | 2 |
ventricle of nervous system | 3.51e-09 | 2 |
choroid plexus | 3.51e-09 | 2 |
brain ventricle | 3.51e-09 | 2 |
ventricular system of brain | 3.51e-09 | 2 |
ventricular system of central nervous system | 3.51e-09 | 2 |
brain vasculature | 1.20e-07 | 5 |