FFCP PHASE1:Hg19::chr2:29446678..29446695,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=238 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=427 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-163bp_to_uc010ymo.1_5end | |||
|cluster_id=chr2:29446678..29446695,- | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_3_at_ALK_5end | |||
|id=chr2:29446678..29446695,- | |||
|ontology_enrichment_celltype=CL:0002619!1.60e-13!3;CL:0000235!2.39e-10!10;CL:0000147!4.96e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000235;7.07e-82;6!CL:0002619;1.62e-60;3!CL:0002253;4.30e-11;2!CL:0000473;8.94e-11;39!CL:0000234;8.94e-11;39!CL:0000766;1.60e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,7.07e-82,6;CL:0002619,1.62e-60,3;CL:0002194,6.91e-21,59;CL:0000576,6.91e-21,59;CL:0000040,6.91e-21,59;CL:0000559,6.91e-21,59;CL:0002009,3.32e-20,61;CL:0000839,1.11e-18,66;CL:0000557,2.12e-18,67;CL:0000766,4.02e-17,72;CL:0000763,2.34e-11,108;CL:0000049,2.34e-11,108;CL:0002253,4.09e-11,2;CL:0002087,1.20e-10,115;CL:0000473,1.85e-10,48;CL:0000234,1.85e-10,48;CL:0002031,3.43e-10,120;CL:0000738,5.97e-09,136;CL:0002032,1.70e-07,161;CL:0000837,1.70e-07,161;CL:0000037,3.64e-07,168;CL:0000988,8.89e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;8.53e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,9.43e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.31e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.23e-16,76;UBERON:0001474,5.05e-15,82;UBERON:0004765,1.13e-13,90;UBERON:0002405,3.16e-13,93;UBERON:0002390,1.53e-12,98;UBERON:0003061,1.53e-12,98;UBERON:0001434,2.76e-12,100;UBERON:0002193,2.34e-11,108;UBERON:0002204,3.27e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,67.1746422719773,32.065472935879,46.878753309422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.7771257609247,0,4.7561971932393,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.317489471460845,0,0,0,0.719792448923265,0.901029173531752,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.378615870531,33.6512251259525,8.43335757932127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,1.51472047819464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.539124056983409,0,0,0.169732529954025,0,0,0.558644917973244,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,1.02892805662451,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0.23806443146374,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p3@ALK | |||
}} |
Latest revision as of 20:58, 16 September 2015
Short description: | p3@ALK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ALK_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | -163bp_to_uc010ymo.1_5end |
EntrezGene: | ALK |
HGNC: | 427 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 7.07e-82 | 6 |
adult endothelial progenitor cell | 1.62e-60 | 3 |
monopoietic cell | 6.91e-21 | 59 |
monocyte | 6.91e-21 | 59 |
monoblast | 6.91e-21 | 59 |
promonocyte | 6.91e-21 | 59 |
macrophage dendritic cell progenitor | 3.32e-20 | 61 |
myeloid lineage restricted progenitor cell | 1.11e-18 | 66 |
granulocyte monocyte progenitor cell | 2.12e-18 | 67 |
myeloid leukocyte | 4.02e-17 | 72 |
myeloid cell | 2.34e-11 | 108 |
common myeloid progenitor | 2.34e-11 | 108 |
epithelial cell of large intestine | 4.09e-11 | 2 |
nongranular leukocyte | 1.20e-10 | 115 |
defensive cell | 1.85e-10 | 48 |
phagocyte | 1.85e-10 | 48 |
hematopoietic lineage restricted progenitor cell | 3.43e-10 | 120 |
leukocyte | 5.97e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.70e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.70e-07 | 161 |
hematopoietic stem cell | 3.64e-07 | 168 |
hematopoietic cell | 8.89e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.23e-16 | 76 |
bone element | 5.05e-15 | 82 |
skeletal element | 1.13e-13 | 90 |
immune system | 3.16e-13 | 93 |
hematopoietic system | 1.53e-12 | 98 |
blood island | 1.53e-12 | 98 |
skeletal system | 2.76e-12 | 100 |
hemolymphoid system | 2.34e-11 | 108 |
musculoskeletal system | 3.27e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 9.43e-21 | 1 |