FFCP PHASE1:Hg19::chr2:28113400..28113412,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9577 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1106 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NXR7 | |||
|association_with_transcript=-69bp_to_NM_199193,NM_199194,uc002rlp.1,uc002rlq.2,uc002rlr.2,uc002rls.2,uc002rlt.2,uc002rlu.2_5end | |||
|cluster_id=chr2:28113400..28113412,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_6_at_BRE_5end | |||
|id=chr2:28113400..28113412,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.87e-28!42;CL:0000860!5.55e-26!45;CL:0000766!2.05e-22!76;CL:0000557!1.96e-18!71;CL:0000839!1.07e-17!70;CL:0000738!4.24e-17!140;CL:0000763!8.75e-16!112;CL:0000049!8.75e-16!112;CL:0000988!1.20e-15!182;CL:0002194!2.18e-15!63;CL:0000576!2.18e-15!63;CL:0000040!2.18e-15!63;CL:0000559!2.18e-15!63;CL:0000037!5.80e-15!172;CL:0000566!5.80e-15!172;CL:0002009!1.82e-14!65;CL:0002032!1.01e-13!165;CL:0000837!1.01e-13!165;CL:0002031!3.78e-13!124;CL:0002087!4.44e-13!119;CL:0002393!9.68e-10!9;CL:0002397!9.68e-10!9 | |||
|ontology_enrichment_celltype_v019=CL:0002393;2.25e-27;6!CL:0002397;2.25e-27;6!CL:0000766;6.58e-26;69!CL:0000576;3.34e-18;48!CL:0000860;2.64e-17;33!CL:0002057;2.64e-17;33!CL:0000097;4.84e-16;5!CL:0000094;2.67e-15;8!CL:0000473;1.17e-14;39!CL:0000234;1.17e-14;39!CL:0000226;1.43e-14;3!CL:0000842;1.43e-14;3!CL:0000763;7.64e-12;100!CL:0000771;2.42e-11;2!CL:0000081;4.77e-11;11!CL:0000163;6.08e-09;9!CL:0002087;1.70e-08;104!CL:0000775;1.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.48e-45,72;CL:0000860,7.74e-36,42;CL:0002057,7.74e-36,42;CL:0000763,3.70e-35,108;CL:0000049,3.70e-35,108;CL:0000557,2.03e-34,67;CL:0000738,7.26e-33,136;CL:0000839,5.90e-32,66;CL:0000037,7.13e-31,168;CL:0000473,8.39e-31,48;CL:0000234,8.39e-31,48;CL:0000988,8.99e-31,177;CL:0002032,1.07e-26,161;CL:0000837,1.07e-26,161;CL:0002393,2.41e-24,9;CL:0002397,2.41e-24,9;CL:0002194,9.32e-24,59;CL:0000576,9.32e-24,59;CL:0000040,9.32e-24,59;CL:0000559,9.32e-24,59;CL:0002009,7.55e-23,61;CL:0002031,2.20e-20,120;CL:0002087,2.37e-19,115;CL:0000097,4.37e-16,5;CL:0002028,4.37e-16,5;CL:0000094,1.54e-15,8;CL:0000226,2.83e-14,3;CL:0000842,2.83e-14,3;CL:0000134,1.74e-13,354;CL:0002320,4.54e-13,361;CL:0000219,1.33e-11,386;CL:0000771,2.45e-11,2;CL:0000081,3.22e-11,11;CL:0000048,8.37e-10,427;CL:0000723,1.48e-09,433;CL:0000034,3.10e-09,441;CL:0000163,5.75e-09,9;CL:0000775,1.69e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.41e-25;42!CL:0000049;4.15e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.86e-14!80;UBERON:0001474!6.77e-13!86;UBERON:0002390!1.10e-12!102;UBERON:0003061!1.10e-12!102;UBERON:0004765!1.15e-10!101;UBERON:0001434!1.15e-10!101;UBERON:0002193!1.54e-10!112;UBERON:0002405!8.26e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.64e-30,76;UBERON:0002390,1.85e-28,98;UBERON:0003061,1.85e-28,98;UBERON:0001474,3.46e-27,82;UBERON:0002193,2.78e-25,108;UBERON:0004765,2.63e-24,90;UBERON:0002405,2.36e-23,93;UBERON:0001434,2.38e-21,100;UBERON:0002384,1.73e-13,371;UBERON:0003081,1.04e-11,203;UBERON:0002204,1.16e-10,167 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0,0,0,1.96682138424452,0,0.77408061658038,0,0,0,0,0,0,1.10799081706375,1.00272223735071,1.30206522429511,0,0,0,0,0.377875943688809,0.485168122375632,0.929716147622738,1.23350366406548,1.54853185447552,0.575384784644301,0.256160706529101,0.47296445977717,4.48169384957604,1.93645405075148,5.41705946377367,0.188242339542605,0.818718450173537,0.449446968890169,1.22433556948361,0.641858054152187,3.19668562899521,0,0.199463657621632,0.426224750532694,1.16083695451434,0.56738522469114,0,1.50749199154046,0.521482918420201,0.868755378820466,1.21079900526674,0.368277635987565,0,1.90129757680748,1.27562579979026,1.25795187305026,1.79725809834392,0.450530678524519,1.12507910687956,1.99508920618874,0.59675003159727,0.91332076882317,0,0,0,0,0,0,0,0,0.569212969109448,0,0.764546456250458,0,0,0,0,0.393010762749165,1.43921049299656,0,0.32592226663359,0,1.94826728407911,0,1.17842362989935,0.221533894583621,0.270803863765016,0,0,0,0.276350017785848,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0.403213486449465,0.267440195783507,0.289648807765598,0,0,0.12786256184353,0,1.00267582127178,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0.0892997282840798,0,0,0,0,0,10.5424333948851,11.6334079244498,0,0,0,0,0.573673241497627,0,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0.206105058476878,0,0.18611685633159,0,0,0.252433774244115,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0.643240938192885,0,0.464367928031979,0,0.236613600079688,0.337169380156203,0.482022059766964,0.110293972732394,0.435758888184812,0,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0,0,0,1.96565443335525,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,0.088048434013226,2.48793738648926,2.01767934783746,4.79721247020244,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0.394061520403854,1.72502059887614,0.641715181398742,0,0,0.773288812777695,0,0,1.49801404789436,0,9.11714129559278,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0.343143423810856,1.03384013061444,1.72571360654893,1.06727557803444,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0.114814448164607,0,0,0.902399225814824,0.0770153371044148,1.56869953835371,0,0.73886140225013,0,0,0.215915916102139,0,0.270946437543853,1.00337954770971,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0.48763373908959,0,0,0,0,0,0,0.66343897524122,0.876901770507525,0,0,0,0,0,0,0,0,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0.649243880549111,0,0,0,0,0.169291777801603,0,0.605399121573143,1.70338495076131,0,0,0,0.166849141711909,0,0.278406173895242,0,0.270455678475983,0,0,0,0.439524537815682,0.121360521749513,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0.16480387422676,0.844501632511974,0.996239941255349,0.276283915531148,0,0.102268682502155,0.246169610922139,0.622079175323615,0.0898683511473268,0.179021174675609,1.02314474045374,0.197286811273867,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.307801034015188,0.227884111694002,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0.632994193584081,0.326465616318295,0,0,0,0.353830258013357,0,0,0.123563938946503,0,0.067401132980677,0,0.234264445725339,0,0,0.242780379534093,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0.0821154570532092,0,0.0882561266915003,0,0,0,0,0,0.160317640503067,0.426905989478705,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0.600420288709789,0,1.27746588066972,0,0,0,0,0,0,0,0.223171457441873,0.201550417460179,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.945668487590378,0.209818352539992,0,0.179287339332845,0,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0.340776043570843,0.113312091520126,0.146552233678082,0,0.258565912723101,0,0.171086837884329,0,0.213574825135389,0.471612915298998,0,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0,0.1251909307065,0.573409195690071,0.110929051536852,0.310482014706917,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.318593534327405,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0,0,0,0,0,0.512483037175893,0,0,0.138258436151731,0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| |||
|short_description=p6@BRE | |||
}} |
Latest revision as of 18:29, 16 September 2015
Short description: | p6@BRE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_BRE_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -69bp_to_NM_199193, NM_199194, uc002rlp.1, uc002rlq.2, uc002rlr.2, uc002rls.2, uc002rlt.2, uc002rlu.2_5end |
EntrezGene: | BRE |
HGNC: | 1106 |
UniProt: | Q9NXR7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.64e-30 | 76 |
hematopoietic system | 1.85e-28 | 98 |
blood island | 1.85e-28 | 98 |
bone element | 3.46e-27 | 82 |
hemolymphoid system | 2.78e-25 | 108 |
skeletal element | 2.63e-24 | 90 |
immune system | 2.36e-23 | 93 |
skeletal system | 2.38e-21 | 100 |
connective tissue | 1.73e-13 | 371 |
lateral plate mesoderm | 1.04e-11 | 203 |
musculoskeletal system | 1.16e-10 | 167 |