FFCP PHASE1:Mm9::chr10:85961617..85961654,-: Difference between revisions
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{{FFCP|EntrezGene=27204|HGNC=|MCL_coexpression_id=2596|UniProt=D3Z620,Q3KN99,Q8JZP2|association_with_transcript=0bp_to_ENSMUST00000121789,ENSMUST00000139197,NM_001164495,NM_013722,uc007gnn.2,uc007gnt.2,uc007gnu.2,uc011xks.1_5end|description=CAGE_peak_1_at_Syn3_5end|id=chr10:85961617..85961654,-|ontology_enrichment_celltype=CL:0000540!4.20e-17!33;CL:0000047!4.20e-17!33;CL:0000031!4.20e-17!33;CL:0000404!4.20e-17!33;CL:0000393!4.05e-11!39;CL:0000211!4.05e-11!39;CL:0000117!4.31e-11!23;CL:0000337!4.31e-11!23;CL:0000221!5.63e-09!44;CL:0000133!5.63e-09!44;CL:0002319!1.18e-08!43;CL:0000107!6.93e-07!9|ontology_enrichment_celltype_v019_2=CL:0000540,2.62e-17,33;CL:0000047,2.62e-17,33;CL:0000031,2.62e-17,33;CL:0000404,2.62e-17,33;CL:0000117,3.22e-11,23;CL:0000337,3.22e-11,23;CL:0000393,3.25e-11,39;CL:0000211,3.25e-11,39;CL:0000221,9.18e-09,44;CL:0000133,9.18e-09,44;CL:0002319,1.92e-08,43;CL:0000107,5.88e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.08e-25!73;UBERON:0005743!3.08e-25!73;UBERON:0000073!1.98e-23!75;UBERON:0001016!1.98e-23!75;UBERON:0004121!1.03e-21!102;UBERON:0000924!1.03e-21!102;UBERON:0006601!1.03e-21!102;UBERON:0002346!1.51e-20!71;UBERON:0003075!1.51e-20!71;UBERON:0007284!1.51e-20!71;UBERON:0000033!1.18e-18!63;UBERON:0001049!2.29e-18!52;UBERON:0005068!2.29e-18!52;UBERON:0006241!2.29e-18!52;UBERON:0007135!2.29e-18!52;UBERON:0000955!1.90e-17!50;UBERON:0006238!1.90e-17!50;UBERON:0002616!8.60e-17!49;UBERON:0003056!1.04e-15!49;UBERON:0003080!1.30e-14!40;UBERON:0002020!3.54e-14!34;UBERON:0002780!6.20e-14!39;UBERON:0001890!6.20e-14!39;UBERON:0006240!6.20e-14!39;UBERON:0002791!1.25e-11!29;UBERON:0003528!1.25e-11!29;UBERON:0001893!1.25e-11!29;UBERON:0007811!6.16e-08!86;UBERON:0000468!6.87e-08!333;UBERON:0000956!9.00e-08!21;UBERON:0001869!9.00e-08!21;UBERON:0000203!9.00e-08!21;UBERON:0000153!1.83e-07!94;UBERON:0000489!3.96e-07!21;UBERON:0000922!5.73e-07!328;UBERON:0002410!6.93e-07!9;UBERON:0002021!9.44e-07!10;UBERON:0000411!9.44e-07!10;UBERON:0001950!9.44e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.99e-25,73;UBERON:0001016,2.72e-23,75;UBERON:0004121,3.94e-22,95;UBERON:0000924,3.94e-22,95;UBERON:0006601,3.94e-22,95;UBERON:0002346,7.87e-22,64;UBERON:0003075,7.87e-22,64;UBERON:0007284,7.87e-22,64;UBERON:0010371,3.91e-20,73;UBERON:0000073,1.22e-19,54;UBERON:0001049,1.68e-18,52;UBERON:0005068,1.68e-18,52;UBERON:0006241,1.68e-18,52;UBERON:0007135,1.68e-18,52;UBERON:0003056,7.46e-16,49;UBERON:0000955,8.60e-16,47;UBERON:0006238,8.60e-16,47;UBERON:0002616,3.80e-15,46;UBERON:0003080,9.73e-15,40;UBERON:0002020,2.70e-14,34;UBERON:0002780,4.72e-14,39;UBERON:0001890,4.72e-14,39;UBERON:0006240,4.72e-14,39;UBERON:0010314,2.68e-12,92;UBERON:0003528,1.03e-11,29;UBERON:0002791,1.03e-11,29;UBERON:0001893,1.03e-11,29;UBERON:0000956,8.22e-08,21;UBERON:0001869,8.22e-08,21;UBERON:0000203,8.22e-08,21;UBERON:0000489,3.34e-07,21;UBERON:0002410,5.88e-07,9;UBERON:0002021,8.05e-07,10;UBERON:0000411,8.05e-07,10;UBERON:0001950,8.05e-07,10|phase1_expression=12.8119077683835,0,0,0,0,2.18243053485457,1.16806320297763,0,0,0,0,0.0797721589953364,0,0,0,0,0,0.157731082679119,0.274228867211478,0.42438965179803,8.24919914465377,3.47518329203099,16.7167865048919,1.11994695955385,0.91763712426868,0.57423196411502,0,0.430942465371778,1.14014051673824,0.756090389279792,0,0,0,0,5.48818077527422,2.1610503896604,4.28755648150975,0,0,0,0,0,0,1.1330713617802,0.811015449756117,0.734187008646726,0,0.65407546914134,0.219686182734472,1.1665793944457,0.419959264876088,0,0,0,0,0,0,0,15.578367486189,15.869729378161,10.1413024560989,0,0,0,0,0,0.898800331555214,1.15265491596466,8.39885859698669,8.91039192989158,6.52007380189284,17.7103610330358,13.4729809980484,12.1265891222804,9.10531974673246,11.0306254393203,26.4278114398533,23.6221575457597,23.348193054949,15.1669230889723,14.729510619988,10.939180781692,24.5681039121215,22.5105044012672,20.3221669543157,28.2843442054721,23.7760706934502,18.0807462450542,0.151452386666368,0.529000920747499,7.8263411949453,2.58127163094416,0.679971333707751,3.77792234146472,5.19821133958135,2.24013443548668,2.24711072210803,0,0,0,9.71819596459095,0,0,0,0.865964164044856,2.02687892380079,1.51657333504435,1.7127581957859,1.8125651855302,4.00793775475027,7.28638372417771,4.56698217468212,2.07553947530453,2.41156224884196,6.23220147819235,2.38766523526383,2.47194967734374,2.74738778147832,0,0.323533699894818,0.441683036920787,1.45462575940567,9.31958806090611,21.958559775866,18.850203613211,1.78819938646014,1.67741174308288,0.599902730993408,0.762421362438388,53.6250489069265,40.2600530480391,19.476424577494,30.0716073932638,32.2201476236216,22.8566849015516,28.0677385107221,17.720049309955,3.23458123586242,5.81262344397452,3.99839526184301,6.63614259109789,4.82794419310293,4.32149111532838,7.53524089178575,7.41597840749474,8.45550553880009,6.46541899462129,11.9003550539947,3.01795190105979,4.9167580843633,6.862093842394,1.97276159184817,3.89266148915837,3.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=27204 | |||
|HGNC= | |||
|MCL_coexpression_id=2596 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z620,Q3KN99,Q8JZP2 | |||
|association_with_transcript=0bp_to_ENSMUST00000121789,ENSMUST00000139197,NM_001164495,NM_013722,uc007gnn.2,uc007gnt.2,uc007gnu.2,uc011xks.1_5end | |||
|cluster_id=chr10:85961617..85961654,- | |||
|description=CAGE_peak_1_at_Syn3_5end | |||
|id=chr10:85961617..85961654,- | |||
|ontology_enrichment_celltype=CL:0000540!4.20e-17!33;CL:0000047!4.20e-17!33;CL:0000031!4.20e-17!33;CL:0000404!4.20e-17!33;CL:0000393!4.05e-11!39;CL:0000211!4.05e-11!39;CL:0000117!4.31e-11!23;CL:0000337!4.31e-11!23;CL:0000221!5.63e-09!44;CL:0000133!5.63e-09!44;CL:0002319!1.18e-08!43;CL:0000107!6.93e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.62e-17,33;CL:0000047,2.62e-17,33;CL:0000031,2.62e-17,33;CL:0000404,2.62e-17,33;CL:0000117,3.22e-11,23;CL:0000337,3.22e-11,23;CL:0000393,3.25e-11,39;CL:0000211,3.25e-11,39;CL:0000221,9.18e-09,44;CL:0000133,9.18e-09,44;CL:0002319,1.92e-08,43;CL:0000107,5.88e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.08e-25!73;UBERON:0005743!3.08e-25!73;UBERON:0000073!1.98e-23!75;UBERON:0001016!1.98e-23!75;UBERON:0004121!1.03e-21!102;UBERON:0000924!1.03e-21!102;UBERON:0006601!1.03e-21!102;UBERON:0002346!1.51e-20!71;UBERON:0003075!1.51e-20!71;UBERON:0007284!1.51e-20!71;UBERON:0000033!1.18e-18!63;UBERON:0001049!2.29e-18!52;UBERON:0005068!2.29e-18!52;UBERON:0006241!2.29e-18!52;UBERON:0007135!2.29e-18!52;UBERON:0000955!1.90e-17!50;UBERON:0006238!1.90e-17!50;UBERON:0002616!8.60e-17!49;UBERON:0003056!1.04e-15!49;UBERON:0003080!1.30e-14!40;UBERON:0002020!3.54e-14!34;UBERON:0002780!6.20e-14!39;UBERON:0001890!6.20e-14!39;UBERON:0006240!6.20e-14!39;UBERON:0002791!1.25e-11!29;UBERON:0003528!1.25e-11!29;UBERON:0001893!1.25e-11!29;UBERON:0007811!6.16e-08!86;UBERON:0000468!6.87e-08!333;UBERON:0000956!9.00e-08!21;UBERON:0001869!9.00e-08!21;UBERON:0000203!9.00e-08!21;UBERON:0000153!1.83e-07!94;UBERON:0000489!3.96e-07!21;UBERON:0000922!5.73e-07!328;UBERON:0002410!6.93e-07!9;UBERON:0002021!9.44e-07!10;UBERON:0000411!9.44e-07!10;UBERON:0001950!9.44e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.99e-25,73;UBERON:0001016,2.72e-23,75;UBERON:0004121,3.94e-22,95;UBERON:0000924,3.94e-22,95;UBERON:0006601,3.94e-22,95;UBERON:0002346,7.87e-22,64;UBERON:0003075,7.87e-22,64;UBERON:0007284,7.87e-22,64;UBERON:0010371,3.91e-20,73;UBERON:0000073,1.22e-19,54;UBERON:0001049,1.68e-18,52;UBERON:0005068,1.68e-18,52;UBERON:0006241,1.68e-18,52;UBERON:0007135,1.68e-18,52;UBERON:0003056,7.46e-16,49;UBERON:0000955,8.60e-16,47;UBERON:0006238,8.60e-16,47;UBERON:0002616,3.80e-15,46;UBERON:0003080,9.73e-15,40;UBERON:0002020,2.70e-14,34;UBERON:0002780,4.72e-14,39;UBERON:0001890,4.72e-14,39;UBERON:0006240,4.72e-14,39;UBERON:0010314,2.68e-12,92;UBERON:0003528,1.03e-11,29;UBERON:0002791,1.03e-11,29;UBERON:0001893,1.03e-11,29;UBERON:0000956,8.22e-08,21;UBERON:0001869,8.22e-08,21;UBERON:0000203,8.22e-08,21;UBERON:0000489,3.34e-07,21;UBERON:0002410,5.88e-07,9;UBERON:0002021,8.05e-07,10;UBERON:0000411,8.05e-07,10;UBERON:0001950,8.05e-07,10 | |||
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| |||
|short_description=p1@Syn3 | |||
}} |
Latest revision as of 12:40, 26 September 2015
Short description: | p1@Syn3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Syn3_5end |
Coexpression cluster: | MCL_coexpression_mm9:2596 |
Association with transcript: | 0bp_to_ENSMUST00000121789, ENSMUST00000139197, NM_001164495, NM_013722, uc007gnn.2, uc007gnt.2, uc007gnu.2, uc011xks.1_5end |
EntrezGene: | Syn3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.62e-17 | 33 |
neuronal stem cell | 2.62e-17 | 33 |
neuroblast | 2.62e-17 | 33 |
electrically signaling cell | 2.62e-17 | 33 |
CNS neuron (sensu Vertebrata) | 3.22e-11 | 23 |
neuroblast (sensu Vertebrata) | 3.22e-11 | 23 |
electrically responsive cell | 3.25e-11 | 39 |
electrically active cell | 3.25e-11 | 39 |
ectodermal cell | 9.18e-09 | 44 |
neurectodermal cell | 9.18e-09 | 44 |
neural cell | 1.92e-08 | 43 |
autonomic neuron | 5.88e-07 | 9 |