FFCP PHASE1:Hg19::chr9:139926918..139926933,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:139926918..139926933,-
|short_description=p3@FUT7
|description=CAGE_peak_3_at_FUT7_5end
|association_with_transcript=358bp_to_NM_004479,uc004ckq.2_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2529 | |EntrezGene=2529 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4018 | |HGNC=4018 | ||
|TSSclassifier=strong | |||
|UniProt=Q11130 | |UniProt=Q11130 | ||
|association_with_transcript=358bp_to_NM_004479,uc004ckq.2_5end | |||
|cluster_id=chr9:139926918..139926933,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_FUT7_5end | |||
|id=chr9:139926918..139926933,- | |||
|ontology_enrichment_celltype=CL:0000037!3.08e-66!172;CL:0000566!3.08e-66!172;CL:0000988!6.31e-61!182;CL:0002032!2.51e-60!165;CL:0000837!2.51e-60!165;CL:0000738!2.93e-51!140;CL:0000763!2.09e-46!112;CL:0000049!2.09e-46!112;CL:0002087!7.97e-40!119;CL:0002031!2.41e-37!124;CL:0000766!1.73e-29!76;CL:0002009!4.20e-27!65;CL:0000557!2.74e-25!71;CL:0002194!3.73e-25!63;CL:0000576!3.73e-25!63;CL:0000040!3.73e-25!63;CL:0000559!3.73e-25!63;CL:0000839!1.17e-22!70;CL:0000134!2.50e-17!358;CL:0002057!3.94e-17!42;CL:0002320!1.83e-16!365;CL:0000860!1.91e-15!45;CL:0000451!8.01e-15!10;CL:0000219!5.86e-14!390;CL:0000990!9.48e-13!8;CL:0000838!1.63e-12!52;CL:0000542!3.93e-12!53;CL:0000051!3.93e-12!53;CL:0000048!2.20e-10!430;CL:0000723!6.87e-10!436;CL:0000034!8.95e-10!444;CL:0000094!9.10e-10!8;CL:0000840!1.41e-09!5;CL:0001029!1.41e-09!5;CL:0000084!2.65e-09!25;CL:0000827!2.65e-09!25;CL:0000791!2.00e-07!18;CL:0000789!2.00e-07!18;CL:0002420!2.00e-07!18;CL:0002419!2.00e-07!18;CL:0000790!2.00e-07!18;CL:0000453!4.51e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000775;4.79e-14;3!CL:0000094;1.03e-13;8!CL:0000081;7.04e-10;11!CL:0000771;8.02e-10;2!CL:0000763;2.28e-09;100!CL:0000988;8.19e-08;177!CL:0000840;4.48e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.37e-27,108;CL:0000049,3.37e-27,108;CL:0000037,6.70e-27,168;CL:0002032,1.13e-26,161;CL:0000837,1.13e-26,161;CL:0000988,4.13e-25,177;CL:0000766,2.32e-14,72;CL:0000738,3.42e-14,136;CL:0000775,3.55e-14,3;CL:0000094,8.38e-14,8;CL:0002087,1.76e-10,115;CL:0000081,6.07e-10,11;CL:0000771,7.69e-10,2;CL:0000134,4.03e-09,354;CL:0002194,8.58e-09,59;CL:0000576,8.58e-09,59;CL:0000040,8.58e-09,59;CL:0000559,8.58e-09,59;CL:0002320,8.81e-09,361;CL:0002031,9.13e-09,120;CL:0000557,1.01e-08,67;CL:0002009,2.01e-08,61;CL:0000839,1.35e-07,66;CL:0000219,1.38e-07,386;CL:0000840,3.88e-07,5;CL:0001029,3.88e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000049;2.24e-08;108 | |||
|ontology_enrichment_disease=DOID:8692!1.07e-13!31;DOID:1240!2.10e-13!39;DOID:2531!6.53e-12!51;DOID:0060083!6.53e-12!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.57e-22;31!DOID:1240;1.75e-15;39!DOID:2531;6.20e-10;51!DOID:0060083;6.20e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,9.87e-23,31;DOID:1240,2.03e-17,39;DOID:2531,1.17e-14,51;DOID:0060083,1.17e-14,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.76e-35!102;UBERON:0003061!2.76e-35!102;UBERON:0002193!2.70e-33!112;UBERON:0002371!2.54e-22!80;UBERON:0001474!7.70e-20!86;UBERON:0002405!7.47e-19!115;UBERON:0002384!2.71e-15!375;UBERON:0004765!5.44e-15!101;UBERON:0001434!5.44e-15!101;UBERON:0000178!1.81e-11!15;UBERON:0000179!1.81e-11!15;UBERON:0000463!1.81e-11!15;UBERON:0003081!3.26e-09!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.74e-22;15!UBERON:0000179;6.74e-22;15!UBERON:0000463;6.74e-22;15!UBERON:0002390;3.50e-11;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.98e-22,15;UBERON:0000179,5.98e-22,15;UBERON:0000463,5.98e-22,15;UBERON:0002390,8.39e-17,98;UBERON:0003061,8.39e-17,98;UBERON:0002193,9.35e-15,108;UBERON:0002384,2.56e-08,371;UBERON:0002371,2.29e-07,76 | |||
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| ||
|short_description=p3@FUT7 | |||
}} | }} |
Latest revision as of 15:24, 16 September 2015
Short description: | p3@FUT7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FUT7_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 358bp_to_NM_004479, uc004ckq.2_5end |
EntrezGene: | FUT7 |
HGNC: | 4018 |
UniProt: | Q11130 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 3.37e-27 | 108 |
common myeloid progenitor | 3.37e-27 | 108 |
hematopoietic stem cell | 6.70e-27 | 168 |
hematopoietic oligopotent progenitor cell | 1.13e-26 | 161 |
hematopoietic multipotent progenitor cell | 1.13e-26 | 161 |
hematopoietic cell | 4.13e-25 | 177 |
myeloid leukocyte | 2.32e-14 | 72 |
leukocyte | 3.42e-14 | 136 |
neutrophil | 3.55e-14 | 3 |
granulocyte | 8.38e-14 | 8 |
nongranular leukocyte | 1.76e-10 | 115 |
blood cell | 6.07e-10 | 11 |
eosinophil | 7.69e-10 | 2 |
mesenchymal cell | 4.03e-09 | 354 |
monopoietic cell | 8.58e-09 | 59 |
monocyte | 8.58e-09 | 59 |
monoblast | 8.58e-09 | 59 |
promonocyte | 8.58e-09 | 59 |
connective tissue cell | 8.81e-09 | 361 |
hematopoietic lineage restricted progenitor cell | 9.13e-09 | 120 |
granulocyte monocyte progenitor cell | 1.01e-08 | 67 |
macrophage dendritic cell progenitor | 2.01e-08 | 61 |
myeloid lineage restricted progenitor cell | 1.35e-07 | 66 |
motile cell | 1.38e-07 | 386 |
immature conventional dendritic cell | 3.88e-07 | 5 |
common dendritic progenitor | 3.88e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
blood | 5.98e-22 | 15 |
haemolymphatic fluid | 5.98e-22 | 15 |
organism substance | 5.98e-22 | 15 |
hematopoietic system | 8.39e-17 | 98 |
blood island | 8.39e-17 | 98 |
hemolymphoid system | 9.35e-15 | 108 |
connective tissue | 2.56e-08 | 371 |
bone marrow | 2.29e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 9.87e-23 | 31 |
leukemia | 2.03e-17 | 39 |
hematologic cancer | 1.17e-14 | 51 |
immune system cancer | 1.17e-14 | 51 |