FFCP PHASE1:Hg19::chr2:242192880..242192896,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:242192880..242192896,- | |||
|coexpression_cluster_id=C4212 | |||
|description=CAGE_peak_at_chr2:242192880..242192896,- | |||
|id=chr2:242192880..242192896,- | |||
|ontology_enrichment_celltype=CL:0000055!7.18e-11!180;CL:0000057!1.55e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000723;3.38e-07;61!CL:0000134;3.89e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.27e-08,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.88e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.16e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.60e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.08e-08!83;UBERON:0002329!1.08e-08!83;UBERON:0003077!1.08e-08!83;UBERON:0003059!1.08e-08!83;UBERON:0007282!1.08e-08!83;UBERON:0009618!1.08e-08!83;UBERON:0007285!1.08e-08!83;UBERON:0003102!1.85e-08!95;UBERON:0005256!6.22e-08!143;UBERON:0004290!1.23e-07!70;UBERON:0000486!1.87e-07!82;UBERON:0003104!5.80e-07!238;UBERON:0009142!5.80e-07!238;UBERON:0000468!8.72e-07!659 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,2.37e-08,122;UBERON:0003102,4.78e-08,99;UBERON:0007524,9.31e-08,73;UBERON:0002329,1.05e-07,71;UBERON:0003059,1.05e-07,71;UBERON:0007282,1.05e-07,71;UBERON:0004290,1.05e-07,71;UBERON:0009618,1.05e-07,71;UBERON:0003077,2.16e-07,72;UBERON:0007285,2.16e-07,72;UBERON:0000486,2.64e-07,83;UBERON:0003104,6.63e-07,160;UBERON:0009142,6.63e-07,160;UBERON:0007503,6.76e-07,78 | |||
|phase1_expression=0.54503513781167,7.06531728840244,1.83240725324762,7.00513088471913,0.446961094427288,4.36169262050184,5.06599756336621,0.631719873426831,2.61185628199839,1.22866968250754,0,0.218441372130172,1.58260186937072,1.48519623552056,2.98257638155124,6.72325146451775,5.42425075221579,5.11217063271161,2.43966399395253,0.123121058076788,1.42800483870977,0,0.85870796139317,1.91624195102038,1.75759695432724,1.60468152070698,1.23150884174919,0.944529375764151,0.393364276848904,0,0.464448369948228,0,0.30120591877825,3.69754010166788,0.542270404062111,0.426507697462265,0,0,0.802177789880567,0.434021741431704,0.223915474239924,1.29557466407592,0,0.872389432677388,0,0,0.697287110717054,0.411167888021826,0.309706370895104,0.575384784644301,0.256160706529101,0.236482229888585,0.689491361473237,0,1.35426486594342,1.69418105588344,0.545812300115692,0.674170453335254,0.306083892370903,0.641858054152187,0.639337125799041,0.329851300186716,0.598390972864896,0.852449501065388,0.290209238628584,0,0,1.25624332628372,0,0,0.605399502633369,0,0,0.633765858935825,0.212604299965044,0.209658645508376,0.22465726229299,0.150176892841506,0.16072558669708,0.570025487482497,0.39783335439818,0.182664153764634,1.75996244461323,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0.196709770113833,1.17903228824749,0.411202997999018,0.334372990781356,0,0,0,0.445641827540694,0,0,0.270803863765016,0.640456598628376,0.520237390239513,0.493313713811028,0,0,0.296573126324121,0,0,0.453237370790265,0,0,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0.289648807765598,0,4.69490601792545,1.79007586580942,0.722878304769133,1.00267582127178,4.63508860674636,0,3.40644409211845,0.661743720148475,1.99556457716308,1.49319135678314,0.392937226493138,1.09288586487763,1.11235332835329,1.29818957461873,0.696518949197069,0.664789802594326,0.476981248610684,0.571994910780128,0,0.79504962946682,1.72046919021225,0.694281003215189,2.26123176769604,0.838998872419812,1.10047216776027,1.04497483268405,0.516833518338658,0.71153252537342,0.33472061276467,0,0,1.95249646038536,0,0.81014194788176,1.51809538082936,0.44905874525234,1.12611480483322,0,2.84779697870439,1.46561395144326,0,0,0,4.96971951695318,2.27934920996244,1.32409180813219,3.72887606973458,2.83734705758686,4.48542080113846,0,1.72667283892012,0.311211035399766,2.55950276932407,1.63461903113459,1.36221684880438,3.45705554687999,0.234321431833797,2.49728061464256,0.570471821544449,2.09228152772521,2.46612447151906,2.75184005425824,3.08991774744947,0.61246251376468,5.28187564440602,3.71972812232756,1.18800285728205,3.70900393917835,0,2.15585442544872,1.0100166837244,3.37820003654303,0,0.877955241761676,5.21029252858333,4.20666564938471,1.36118619792025,0.358779271377724,0.85422955527427,1.27159140695737,1.20036438433761,1.64884046781502,1.28820270022815,2.04728541964749,1.0126579934476,3.21542117031955,2.52433774244115,1.65689817556139,2.10139873864455,0.355009592516614,2.61955455391865,1.3564847384839,1.73934767846967,1.09098448236334,0.573609190778008,0.975789649036763,0.530119073285941,1.51052125730374,1.55491582523056,1.26160425437814,0,1.56449532329816,8.36213219650751,2.76269842704961,4.64367928031979,5.77503585335668,1.65629520055781,2.86593973132773,1.92808823906786,1.98529150918309,2.39667388501647,1.18635309555548,1.8876383142423,0.98110732562673,3.8474715694639,1.4763109092493,0,0,1.47008711385542,3.80265104465493,5.89696330006576,2.95394953340702,0.441463099414651,0.737930631258681,0.514703430895577,1.20725313949488,1.1240175325762,1.80952150340936,1.38882667737794,0.651616610620649,1.03993478527958,1.44331342025273,0.34779121492523,0.469634776943287,1.58803092537181,1.85194205030644,3.04406643575357,2.37061319387782,4.29243081047436,0.492434012174795,0.702012795417713,0.743155811443641,0.93733833986777,1.17587489739202,1.27597587518148,0.806026704325635,1.16253575405585,1.53353071666084,0.985326475791887,0.264145302039678,0.207328115540772,0.288239906833923,0.12624243342638,0.190493682876507,0.381988425558278,2.34434894420094,0,1.13110241973656,2.40274446275134,1.14330573052231,0.112131084345361,2.1798003441664,1.3200891447771,1.03417372606222,0,2.535908257668,2.92531928243358,1.04007436911366,0.514414748524284,0,0.799266537048298,2.85955987316295,3.25572963234866,0.823240336780769,1.30294473717494,3.909311436168,5.543663110534,0.602878754119172,0,1.79951384127703,1.2162378064119,1.50677127429638,2.10833939483032,1.4377491329495,3.44585807502342,0,2.46128221334885,5.75333703141074,1.07436577943937,0.336255431980582,0.197030760201927,0.431255149719035,0.256686072559497,0,1.30139853857622,1.54657762555539,0.502548796003046,0.637938751653163,0,0,0,1.96306386750624,2.50085260529839,2.17012018959788,3.53550464602372,10.3488813502354,2.99634588564476,1.63997980989798,0.300946099727719,4.5481500811197,2.0694614258501,1.99267679560631,1.84369168541703,2.60650843404249,0.195801157462741,1.71571711905428,0,0.431428401637234,0.320182673410333,0.303127571446259,1.66435439510497,1.81434175997808,0.992431231275107,1.53461973288062,9.5424432107245,2.05022638809122,0,3.86049410744658,5.93672265779964,4.47208112027701,2.84098760501003,0.574890092096664,6.75030757938707,4.18357362455853,0.725156697549733,2.80709058424599,1.38121483403844,1.95184561879831,5.09855270418808,4.85160335349869,0,0.616122696835318,0,0,1.58327443339314,1.13733384070897,1.70093705276516,1.94324324491925,0,0.541892875087706,0,1.01950509218015,0.831076008928724,0.895499018888713,0,0,1.53870075069834,0.656029291399411,0.325378394664303,0.618246069886334,1.64825036673018,0.82509499920588,0,2.60024098414608,3.21367859688319,0.290012154876366,1.3864375540318,2.30255512089194,1.65403886981437,1.71872391789238,5.65565106265491,1.27839941124151,0.801288320820636,2.31398881505369,2.88285101047659,0,1.8208400553999,5.11330104227014,1.88887408098384,0.6970372701606,0.308033580176089,1.06461206063404,0.869932992075073,0.74129687641568,2.57624796135584,1.48863347743867,0,2.85945290885737,0.255897791311334,3.85145089230528,0.95460974377781,0.78494864019923,2.15846949099978,4.39259247577688,2.82749765629647,0.606547444719948,9.5106192703805,0.842516912477962,0.48763373908959,3.1682753652067,4.22600587027022,0.545999645631943,6.50464986987079,7.910568163417,2.2054613741845,3.3171948762061,2.19225442626881,1.73632660280006,2.62357900818653,0.811641507850816,2.478587984798,2.25356482025793,0.430234056612155,1.47373561519682,2.49669736036875,0,4.43326034125095,2.96365403663912,0.379473173765715,0.349934720244983,0.48111056362756,0.670302275535787,1.08890984861323,0.847294206991012,0,3.36942951335251,0.443430153536676,0.918893600827838,0,0.764637207142375,1.13929437434833,0.714695326373367,0,0.648473311192717,0,0.79312517629427,0.747768497892312,0,0.245040215981032,1.48642540100575,0.144269212976445,0,0.478278818186467,1.79621434289535,0,0.423347165447766,0.649243880549111,1.40398589056729,1.14117339516596,1.25343916618419,0,1.86220955581764,0.802940375518498,1.21079824314629,1.27753871307098,0.687010689511529,1.22896305723383,0.223676107892416,1.00109485027145,0.586164286206121,0,0,0.540911356951966,0.66614393599564,0,0.18714054040822,0.73254089635947,0.485442086998054,0.111443384277478,0.284136146806413,1.67121139316383,0.296964680832639,1.84296421259539,2.98244294329889,0.422008249231538,0.445234820091624,0.16480387422676,0.422250816255987,2.78947183551498,0.276283915531148,0.251932747854276,0.306806047506464,0.369254416383208,2.79935628895627,0.269605053441981,1.25314822272926,0,0.295930216910801,0,0,0.969332746095218,0.834912883456661,1.99613798001194,0.7812832832557,0.262379999988587,0,1.0241410345695,0.762760950878299,1.18193840883968,0,0.874813840149763,2.60437492399938,0.885741385813839,0.723578631752448,0,0.552896299656123,0.591095237907095,0.658156191461918,0.21787692703798,0.83654246567162,0.692552326534174,0.341826167541004,0.23056390438806,0.538545866458633,0.977826347298073,1.91400695839152,1.74035427463538,4.79731298416771,2.04386596391473,0.627921025580099,0.332423363800313,0.902382642468723,0.392125068635479,0.335643173951685,0.37950746544837,0.317873157960757,3.16497096792041,0.816164040795739,0.424059214301822,0.865554558968364,0.995261931078505,0.265372693510018,1.83309043480088,0,0.123563938946503,0.313265848516366,0.269604531922708,0.802577647298789,0.468528891450678,1.82454789215666,0.19566461893209,2.67058417487502,2.76209081994573,1.20990716048664,0.61214552326098,0.442306057399416,0,0.829505531177977,1.32930774541437,2.64793564700399,0.313932918407225,1.19472429772959,0,0.554698692052555,3.64475450503775,0.195984794828755,0,1.7472666824203,1.0319161948297,2.22539561964896,1.16942907337897,1.31384731285135,0.484945082442097,0.529536760149002,2.03382666702479,0.548167698587004,0.794858446811959,0.316553979779393,0.391102765469606,0.240476460754601,3.20179492109029,1.9980960958213,1.15272333723285,0.343609788497747,2.05913997434357,0.432164393964449,0.248505071130865,0.942776138467182,0.135904206073614,0.523014231561666,0.713987523454252,0,0.600420288709789,1.23214841002794,0,1.71906176567983,0.262887354279314,1.67569440763353,1.83328339209347,1.43574604915363,2.1964690054889,0.858452096273142,0.223171457441873,0.201550417460179,1.44119953416961,0,3.78159275074674,5.43944665315699,3.5723878242718,0.0984274815147488,0.254019996197353,0.795229689809303,0.953423842781029,0.482259445395058,1.2378549293751,2.9080823662043,0,0,0.182248669974074,0.670869375198532,0.630445658393585,0.209818352539992,0,3.22717210799121,0.191915197319445,3.57347663186684,1.98627591109629,1.77987976358325,7.60199442455198,3.45688596480507,11.4305576038293,0,0.410462603746695,2.04465626142506,0.226624183040251,0.879313402068495,2.65013777824443,0,0.79339561045614,0.342173675768659,0,0.747511887973863,0.471612915298998,1.65695622138878,0.992332043623902,1.18566979138767,0.60896299190448,0,0,0,0,0,0.471162288750703,1.77213635993397,1.34228891392159,0.3755727921195,0,0.887432412294818,0.248385611765534,2.35192679391592,0.37494122388632,0.758245587708239,0.570930667089935,3.76425311517075,1.87333962322753,0.434763085832475,4.77615369237997,5.37540612648616,3.32883516901568,4.35626912132705,5.0313580350515,0.889811221596536,6.17868184671694,4.08323494160745,2.79786961049005,2.36568239983414,3.66382564476516,1.79921244865442,2.17368139626763,4.14706207840855,6.64604286394987,3.1304703708704,3.75644022493046,4.56966254602554,2.44122439922797,3.45512452484863,2.7926744831047,3.24823631914946,3.18476710958893,5.200360940621,3.43395705182793,2.35724642136143,0,1.15571898244382,0,1.30497145982606,1.81364740409818,2.08370226891451,1.95789363605174,1.96997725189636,2.77921302444875,1.31570429747224,1.76689145945881,1.3503982678964,1.8583668471838,3.07489822305536,1.0362910251936,1.82315973706429,0.691292180758654,0.779441235357554,0.398594520940089,0.327130788511688,6.22458712808184,2.94927490504463,0.211312123358627,0.19998739585493,0.106691729694141,0,0,0.368211900503681,0.559518030877778,0,0.127894371303652,0.215649622793364,0.629063767423586,0.54604819096007,0.509197589862076,1.70059936081346,1.85903646388503,0,0.954013051960256,0,0.80057074828547,3.52675943690684,2.4499638188256,0.256916900385838,1.41696576325585,0.638535436228605,0,0.252071696221718,0.138314504928436,0.484426936895553,0,0.196295437002051,0.589848616738702,1.65085738669511,2.4260389891571,1.52552838186867,0,0,0.451261970095544,2.0170506870352,11.7227101684964,0.261906694481422,3.11166643269184,0.147856086217045,0.202612753855184,0.781078098613847,0.413373593002368,0.507326481551255,1.09394961803644,15.3512174720011,3.47347824872506,1.75871244359621,1.02209942111676,0,0,1.82089681270989,0.227662191351298,0.532214220975833,0.345701962667338,0.857440047187092,0.271878931907327,0.394636641377094,0.827356886187777,0.889851215136553,0.470958557103084,0.785577949580009,0.280272163313789,0,0.863710364874486,0.9555033757741,0.214429632529969,0.790068058663633,0.348724276104376,0.173858272302579,1.60342272946051,2.27937780579341,4.4386804044427,0.691259661814092,0,0.709992004383392,0.766920642832419,2.9637093513365,1.3746412112643,0.31020638566432,0,1.78968690876468,0.098150233615243,0.487671699929078,1.29485767437579,1.02662806856247,0,3.88568794447312,0.467878926924211,1.79055697645231,1.30812099855325,0.45178432815584,0.769583617218004,0.301925687133347,0.308696632431779,2.18559560503957,3.29222107453066,1.96118657403124,0.707029641304878,0.588925401344836,0.297046400327086,1.6906229103336,2.37897960562944,0.375935671919414,0.257831551894309,0.89947040332436,0.71421575442263,0.352894871715692,0.481448200135009,0,2.75237570042724,1.29005624836306,0.631086248772738,0.407948941145488,0,4.2322147241232,7.81189538150178,7.39481005810269,8.21990468035199,1.00933139868063,0.98339014767326,0.506794004045748,1.1218771271618,0,0.551369397209069,3.76061308938563,1.06090177505535,5.35928260312357,0,0.827463966895162,2.77204176471275,1.90451545170992,0.193766729508018,0.0620747142958579,0.897054900644907,0.636471582781649,1.61693751166575,5.00748520163011,3.08009970976753,0.0673520530145875,0.860666464712116,1.33064142618405,0.162806537221949,1.70763753404345,0,1.61685363791856,2.34640942403454,0.122241444182866,0.813792356631477,1.99727032255654,1.40891655513718,0.320568492303233 | |||
|short_description=p@chr2:242192880..242192896,- | |||
}} |
Latest revision as of 08:37, 29 July 2015
Short description: | p@chr2:242192880..242192896, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:242192880..242192896, - |
Coexpression cluster: | C4212_Olfactory_Smooth_tenocyte_pancreas_leiomyoma_Preadipocyte_parotid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.27e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 2.37e-08 | 122 |
surface structure | 4.78e-08 | 99 |
dense mesenchyme tissue | 9.31e-08 | 73 |
somite | 1.05e-07 | 71 |
presomitic mesoderm | 1.05e-07 | 71 |
presumptive segmental plate | 1.05e-07 | 71 |
dermomyotome | 1.05e-07 | 71 |
trunk paraxial mesoderm | 1.05e-07 | 71 |
paraxial mesoderm | 2.16e-07 | 72 |
presumptive paraxial mesoderm | 2.16e-07 | 72 |
multilaminar epithelium | 2.64e-07 | 83 |
mesenchyme | 6.63e-07 | 160 |
entire embryonic mesenchyme | 6.63e-07 | 160 |
epithelial vesicle | 6.76e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.60e-08 | 14 |