FFCP PHASE1:Mm9::chr10:83006757..83006768,+: Difference between revisions
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{{FFCP|EntrezGene=319277|HGNC=|MCL_coexpression_id=586|UniProt=Q3UMB9|association_with_transcript=71bp_to_ENSMUST00000038388,NM_001033375,uc007gkj.1,uc011xkp.1_5end|description=CAGE_peak_2_at_A230046K03Rik_5end|id=chr10:83006757..83006768,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000355,2.98e-11,9;CL:0000034,1.03e-10,97;CL:0000988,7.11e-10,32;CL:0002032,7.11e-10,32;CL:0000037,7.11e-10,32;CL:0000837,7.11e-10,32;CL:0000723,2.46e-09,91;CL:0000048,2.46e-09,91;CL:0002320,7.18e-09,46;CL:0000134,7.18e-09,46;CL:0000222,1.75e-08,7;CL:0000219,2.10e-08,54;CL:0000838,5.94e-08,12;CL:0000738,2.23e-07,17;CL:0002087,2.23e-07,17;CL:0000680,2.78e-07,6;CL:0000187,2.78e-07,6;CL:0000056,2.78e-07,6;CL:0000542,3.65e-07,13;CL:0000051,3.65e-07,13;CL:0002031,3.96e-07,25;CL:0000791,6.29e-07,9;CL:0000789,6.29e-07,9;CL:0002420,6.29e-07,9;CL:0002419,6.29e-07,9;CL:0000790,6.29e-07,9;CL:0000084,8.10e-07,11;CL:0000827,8.10e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.98e-11,9;UBERON:0002036,2.98e-11,9;UBERON:0002385,2.98e-11,9;UBERON:0000486,2.98e-11,9;UBERON:0007503,2.98e-11,9;UBERON:0001015,2.98e-11,9;UBERON:0002329,2.98e-11,9;UBERON:0003082,2.98e-11,9;UBERON:0003059,2.98e-11,9;UBERON:0007282,2.98e-11,9;UBERON:0004290,2.98e-11,9;UBERON:0009618,2.98e-11,9;UBERON:0000383,6.93e-10,10;UBERON:0002384,7.18e-09,46;UBERON:0007524,9.01e-09,11;UBERON:0003077,9.01e-09,11;UBERON:0007285,9.01e-09,11;UBERON:0002204,3.08e-08,32|phase1_expression=0.80074423552397,0.348975407639361,0.909998478779072,1.20985684522732,0.500895729946347,0,0,1.29123323441576,4.92760527530834,4.44722600011788,0.68487187290202,0.638177271962691,3.0816131387617,2.88487327982691,0,0.202475267389826,0,2.36596624018678,1.64537320326887,1.69755860719212,0.595303031057488,0.794327609607082,1.30599894569468,0.799962113967033,0.91763712426868,0,0.430761996159075,0.646413698057667,0.570070258369122,0.756090389279792,0.886922042621219,0.635030673459631,0,0,0.288851619751275,0.166234645358492,0,5.4409111995798,5.4693474116666,8.89990364755457,12.3528612486513,5.46436387966757,10.6812277666854,1.76255545165808,1.92616169317078,2.20256102594018,0,0.436050312760893,0,0.388859798148567,0,0,5.03347818173209,3.62681071005672,2.68875039313971,2.82985379639542,1.71920063963254,1.54701627683233,0.202316460859598,0,0,0.677689064138264,0.889294796111139,0.449949858640699,0,0.7104801149461,0,0.384218305321555,0,0.135005938331691,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0.307213066512487,0.131886287730194,0.274462930807229,0.52091337055676,0,0,0.15279824777681,0,0.284743361598206,0.186399445825301,2.80186915332781,2.41828992341714,3.47837386442013,0.860423876981386,0.679971333707751,0,0,0,0.140444420131752,1.87473354835864,1.55871602761721,2.12003744706204,0.563373679106722,1.28326477414318,0,0,0.216491041011214,0.760079596425296,0.505524445014783,0.79928715803342,3.36619248741323,0.593768556259299,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0.352766121407114,0.125666591329675,3.95511948374998,0.433798070759735,2.65383165584962,0.647067399789637,1.10420759230197,0,0,0.878342391034642,0.628340120440365,0.766371165625774,3.35482348616577,2.39961092397363,2.79554499560742,0.299581278809645,0,0.251308704225729,0.347648640384553,0.255715457330331,0.41557608911912,0.162241263067758,0.305518091550949,0.622034853050465,0.252722758433675,0.210441855886474,0.520481771850815,0.459804208866946,0.540186389416048,0.30140963567143,0.272145996605311,0.768682321709099,0.374806898238915,0.258703370739016,0.431135985865684,0.756424320671277,0.879755620819744,0.219195732427575,1.11218899690239,0.696504333044333,0.823128545631774,0.796137067273973,0,1.28673953557358,1.13665399758237,0.621377317606506,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,0.233530684734339,0.16455984991348,0.164167464079095,0.324275238183423,0.730999937126662,0.439100230582101,0.402619256281115,0,0.102904612379284,0,0.528901133327089,0.213288250535234,0.464473343720877,0.644337306610467,0.80673409849337,1.55664630691409,2.85338439168839,1.42358718463353,3.12928013975621,0.502670417600539,0.795825888164603,0.974820435595601,0,0,0,0,0.456994050438915,1.1270773567308,0.203651327845314,0.387904974335251,0.771494018793504,0.885311519739602,0.295220295959204,0.627994911365499,0.123397163921801,0.592905254174298,0.667380422864376,0.393117990226406,0,0.405720242777006,0,0,0.287696137450811,0,0.549122826376163,0,0.744281895337007,0,0.757736633841335,0.538192240565737,0.482443521363367,0.923765950833023,0.947457058852424,0.814824882210129,0.678980343100753,0.938760993154008,0.335012514883631,0.238043640886014,0.585400943573396,0.157635144106191,0,0.159454768657487,0.81931657357869,0.172684981865896,0.289298117163023,3.01582567878545,1.08781136763742,0,0.551873492609465,0.321101179975584,0.35163505977661,1.147544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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=319277 | |||
|HGNC= | |||
|MCL_coexpression_id=586 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UMB9 | |||
|association_with_transcript=71bp_to_ENSMUST00000038388,NM_001033375,uc007gkj.1,uc011xkp.1_5end | |||
|cluster_id=chr10:83006757..83006768,+ | |||
|description=CAGE_peak_2_at_A230046K03Rik_5end | |||
|id=chr10:83006757..83006768,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,2.98e-11,9;CL:0000034,1.03e-10,97;CL:0000988,7.11e-10,32;CL:0002032,7.11e-10,32;CL:0000037,7.11e-10,32;CL:0000837,7.11e-10,32;CL:0000723,2.46e-09,91;CL:0000048,2.46e-09,91;CL:0002320,7.18e-09,46;CL:0000134,7.18e-09,46;CL:0000222,1.75e-08,7;CL:0000219,2.10e-08,54;CL:0000838,5.94e-08,12;CL:0000738,2.23e-07,17;CL:0002087,2.23e-07,17;CL:0000680,2.78e-07,6;CL:0000187,2.78e-07,6;CL:0000056,2.78e-07,6;CL:0000542,3.65e-07,13;CL:0000051,3.65e-07,13;CL:0002031,3.96e-07,25;CL:0000791,6.29e-07,9;CL:0000789,6.29e-07,9;CL:0002420,6.29e-07,9;CL:0002419,6.29e-07,9;CL:0000790,6.29e-07,9;CL:0000084,8.10e-07,11;CL:0000827,8.10e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.98e-11,9;UBERON:0002036,2.98e-11,9;UBERON:0002385,2.98e-11,9;UBERON:0000486,2.98e-11,9;UBERON:0007503,2.98e-11,9;UBERON:0001015,2.98e-11,9;UBERON:0002329,2.98e-11,9;UBERON:0003082,2.98e-11,9;UBERON:0003059,2.98e-11,9;UBERON:0007282,2.98e-11,9;UBERON:0004290,2.98e-11,9;UBERON:0009618,2.98e-11,9;UBERON:0000383,6.93e-10,10;UBERON:0002384,7.18e-09,46;UBERON:0007524,9.01e-09,11;UBERON:0003077,9.01e-09,11;UBERON:0007285,9.01e-09,11;UBERON:0002204,3.08e-08,32 | |||
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| |||
|short_description=p2@A230046K03Rik | |||
}} |
Latest revision as of 11:59, 26 September 2015
Short description: | p2@A230046K03Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_A230046K03Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:586 |
Association with transcript: | 71bp_to_ENSMUST00000038388, NM_001033375, uc007gkj.1, uc011xkp.1_5end |
EntrezGene: | A230046K03Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 2.98e-11 | 9 |
stem cell | 1.03e-10 | 97 |
hematopoietic cell | 7.11e-10 | 32 |
hematopoietic oligopotent progenitor cell | 7.11e-10 | 32 |
hematopoietic stem cell | 7.11e-10 | 32 |
hematopoietic multipotent progenitor cell | 7.11e-10 | 32 |
somatic stem cell | 2.46e-09 | 91 |
multi fate stem cell | 2.46e-09 | 91 |
connective tissue cell | 7.18e-09 | 46 |
mesenchymal cell | 7.18e-09 | 46 |
mesodermal cell | 1.75e-08 | 7 |
motile cell | 2.10e-08 | 54 |
lymphoid lineage restricted progenitor cell | 5.94e-08 | 12 |
leukocyte | 2.23e-07 | 17 |
nongranular leukocyte | 2.23e-07 | 17 |
muscle precursor cell | 2.78e-07 | 6 |
muscle cell | 2.78e-07 | 6 |
myoblast | 2.78e-07 | 6 |
lymphocyte | 3.65e-07 | 13 |
common lymphoid progenitor | 3.65e-07 | 13 |
hematopoietic lineage restricted progenitor cell | 3.96e-07 | 25 |
mature alpha-beta T cell | 6.29e-07 | 9 |
alpha-beta T cell | 6.29e-07 | 9 |
immature T cell | 6.29e-07 | 9 |
mature T cell | 6.29e-07 | 9 |
immature alpha-beta T cell | 6.29e-07 | 9 |
T cell | 8.10e-07 | 11 |
pro-T cell | 8.10e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.98e-11 | 9 |
striated muscle tissue | 2.98e-11 | 9 |
muscle tissue | 2.98e-11 | 9 |
multilaminar epithelium | 2.98e-11 | 9 |
epithelial vesicle | 2.98e-11 | 9 |
musculature | 2.98e-11 | 9 |
somite | 2.98e-11 | 9 |
myotome | 2.98e-11 | 9 |
presomitic mesoderm | 2.98e-11 | 9 |
presumptive segmental plate | 2.98e-11 | 9 |
dermomyotome | 2.98e-11 | 9 |
trunk paraxial mesoderm | 2.98e-11 | 9 |
musculature of body | 6.93e-10 | 10 |
connective tissue | 7.18e-09 | 46 |
dense mesenchyme tissue | 9.01e-09 | 11 |
paraxial mesoderm | 9.01e-09 | 11 |
presumptive paraxial mesoderm | 9.01e-09 | 11 |
musculoskeletal system | 3.08e-08 | 32 |