FFCP PHASE1:Mm9::chr10:80568663..80568677,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=26396|HGNC=|MCL_coexpression_id=60|UniProt=Q63932|association_with_transcript=3bp_to_ENSMUST00000143517_5end|description=CAGE_peak_2_at_Map2k2_5end|id=chr10:80568663..80568677,+|ontology_enrichment_celltype=CL:0000117!5.18e-12!23;CL:0000337!5.18e-12!23;CL:0000393!3.23e-10!39;CL:0000211!3.23e-10!39;CL:0000055!4.18e-10!50;CL:0002319!6.42e-10!43;CL:0000221!2.51e-09!44;CL:0000133!2.51e-09!44;CL:0000540!3.11e-09!33;CL:0000047!3.11e-09!33;CL:0000031!3.11e-09!33;CL:0000404!3.11e-09!33;CL:0002321!2.42e-07!70;CL:0000220!2.42e-07!70|ontology_enrichment_celltype_v019_2=CL:0000117,5.18e-12,23;CL:0000337,5.18e-12,23;CL:0000393,3.23e-10,39;CL:0000211,3.23e-10,39;CL:0002319,6.42e-10,43;CL:0000221,2.51e-09,44;CL:0000133,2.51e-09,44;CL:0000540,3.11e-09,33;CL:0000047,3.11e-09,33;CL:0000031,3.11e-09,33;CL:0000404,3.11e-09,33;CL:0002321,2.42e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.59e-11!73;UBERON:0005743!7.59e-11!73;UBERON:0000073!1.03e-09!75;UBERON:0001016!1.03e-09!75;UBERON:0001049!3.43e-08!52;UBERON:0005068!3.43e-08!52;UBERON:0006241!3.43e-08!52;UBERON:0007135!3.43e-08!52;UBERON:0002346!6.03e-07!71;UBERON:0003075!6.03e-07!71;UBERON:0007284!6.03e-07!71;UBERON:0004121!6.18e-07!102;UBERON:0000924!6.18e-07!102;UBERON:0006601!6.18e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.59e-11,73;UBERON:0010314,2.24e-10,92;UBERON:0001016,1.03e-09,75;UBERON:0000073,9.31e-09,54;UBERON:0001049,3.43e-08,52;UBERON:0005068,3.43e-08,52;UBERON:0006241,3.43e-08,52;UBERON:0007135,3.43e-08,52;UBERON:0002346,8.23e-08,64;UBERON:0003075,8.23e-08,64;UBERON:0007284,8.23e-08,64;UBERON:0004121,1.54e-07,95;UBERON:0000924,1.54e-07,95;UBERON:0006601,1.54e-07,95|phase1_expression=6.56610273129655,7.32848356042658,6.3699893514535,9.67885476181856,12.0214975187123,5.87577451691614,5.60670337429262,4.51931632045517,2.39340827657833,2.34064526321993,3.25314139628459,3.43020283679947,4.96482116800497,5.24522414513984,4.66353666541928,4.656931149966,6.29605690315332,3.62781490161973,3.42786084014347,5.94145512517242,11.9911039113008,3.57447424323187,4.70159620450084,8.63959083084396,6.65286915094793,9.76194338995534,7.32295393470427,5.60225204983311,7.22088993934221,8.82105454159758,5.54326276638262,8.89042942843484,9.22597181376855,0,3.46621943701529,4.48833542467929,4.69589519403449,11.3003540298965,16.4080422349998,9.42342739152837,17.0587131528994,10.9287277593351,11.6522484727477,8.43508680436368,9.52943153463437,8.25960384727567,21.1245662973971,12.4274339136855,7.46933021297204,6.22175677037707,10.9189408867783,17.2503077237966,9.2280433331755,4.35217285206807,2.01656279485478,8.48956138918625,9.74213695791773,11.8604581223812,23.8733423814325,29.6234948392338,35.494558596346,14.9091594110418,14.2287167377782,22.9474427906757,31.6437236021432,27.7087244828979,15.8788058574755,18.4424786554346,13.3759599877936,16.3357185381346,15.1433972172995,15.7108041422092,20.7616428494517,15.6788222995141,12.0765293482978,24.8189072384706,15.4162233399144,7.53355294702608,10.4452442614246,22.6844414895933,17.0167017100482,18.7528813400434,10.6089539620525,8.4414391504752,9.93188610549266,23.2756582524197,16.5151149726959,18.6399445825301,4.24066682665831,3.55186332501892,4.34796733052517,1.72084775396277,4.75979933595425,3.77792234146472,2.59910566979068,2.24013443548668,7.8648875273781,9.20323741921512,9.35229616570328,8.12681021373782,4.78867627240714,11.5493829672886,12.7402619853323,21.3320010945999,8.22665955842614,9.12095515710355,14.1546844604139,5.48082622651488,3.6251303710604,7.71899123137089,9.36820764537134,6.08930956624282,6.22661842591358,6.0289056221049,4.46837087115678,7.6656620711102,5.93267922562497,8.6759614151947,7.96149496754887,7.76480879747564,7.72945314611377,6.78825354389311,11.1835056730873,7.31951992528868,7.74952815209784,8.43008282188352,2.39630249011841,2.39961092397363,2.03312363316904,14.5296920222678,6.40500843946077,12.3141265070607,7.30062144807561,5.8814555185976,9.55825004973976,6.65189178577806,5.09196819251581,5.22509276562391,5.55990068554084,11.7847439296425,8.71806967850115,7.58676944630461,6.66229880279792,5.57607825992146,6.5995404176788,6.79002717509704,8.71426038405478,9.8307280880826,13.1496475689034,7.18603104637713,7.38994721488585,8.76782929710299,5.56094498451196,6.268538997399,5.96768195583036,8.16040493955822,0.702213187313235,3.3455227924913,4.83077948972507,9.32065976409758,12.8989332989603,10.8037236876609,8.28606574548236,11.0187969778546,11.415766353666,6.51095045301142,8.58474884478781,10.1585847859437,11.3546296440302,7.38753588355929,8.431156192769,11.1111990443253,9.44065495751518,13.9574675510787,8.20130799400096,12.4514580978934,7.26921322564356,3.70230793328962,6.39864751605702,3.94802342162745,6.31450560478257,6.45387278794696,6.0042071838115,5.51654315726422,5.21981967698963,6.42325923423642,3.77002813200404,4.37704238490532,6.04388670069272,6.29173586057955,3.8904848977445,4.97853183135918,9.67306294860717,6.16941968092536,9.01661885384643,6.31319116320474,5.62462212786115,6.17195215034803,4.67950374719504,4.42830443938806,3.45397201251025,4.07210640941942,5.03969466048153,5.6727335943472,6.87956482896211,5.62155280962134,8.92584534109413,7.71766911207734,6.87489799809833,5.17853047411459,2.91843408195064,6.86403532970204,2.87536413054709,6.69853705803306,4.36852742360385,4.54641980304801,3.22915344339442,3.37710464954357,7.02062122633098,11.1799932944586,6.51859905768104,8.65699937453459,4.92849521405854,5.52770649557992,5.2369600994923,5.65887578787617,5.35959489961049,4.65075848262427,5.89982644032702,5.73521601505083,5.52591941970866,4.19482269886384,24.1266054302836,26.6513785071168,6.88469982226651,5.79467167239938,8.66973185934077,8.55645312123083,4.91804836130026,15.9056684138755,7.57219726599016,7.41833614163613,5.60100834105277,4.54040716109849,6.46116154838943,9.05844898524264,6.8817819284732,9.64444331107329,9.09161889277004,5.78378369559253,6.38730383437209,7.30068975035746,5.86393053672874,8.57844639457184,11.9470624505967,10.9251286269742,11.4882951646605,7.92141334974772,9.7449624650655,6.7635732547664,5.16856586336442,6.90714086007261,3.56497378384721,6.32073515871632,2.10837217149998,5.15677716240934,8.17055053809091,9.72329907769075,13.5826617971892,12.6458850668639,7.98031051390231,11.5939731441346,6.58196082408484,13.700922710157,7.74416636610244,7.20229040936989,7.05690873775878,7.09010887648364,3.55221738730992,4.52346936961169,4.29740438411291,4.26766339337159,3.78925087618806,8.52956389248344,7.34744787430767,7.01715351074956,3.88908507476395,4.70921142511728,5.05768642567793,5.49067615695654,3.90950388985867,1.6794174278839,2.48759952847963,7.63736494412091,10.4390877881775,6.30290348093231,4.96824567780286,6.48173717644853,4.58561383866973,5.52943820177765,4.1326727862668,7.0674104335688,5.96228877142247,8.07741107013003,77.2259325997341,8.82147621659475,12.7403037651965,10.1114617938905,9.42866711387437,9.46154302748358,7.04143431874524,7.29144555126121,7.96931017635402,18.1188090619505,29.0910306320444,4.4241556887945,7.9062833963164,7.49789987303239,4.54722880422283,4.65469408735452,3.3775830312815,3.4856680360791,2.65841148914239,1.71642964911851,2.13379058634,2.31900225814733,3.31356794515158,2.5977197242889,3.03879945672079,11.789979947991,8.21348027484039,7.89481938163386,6.04384618910682,5.40930863290133,6.56888664079137,5.31139710375069,7.5028932677673,15.0471631210609,5.64751842617067,10.1271552031579,8.59343270159095,6.18671456437275,8.22099023724771,3.7769694869485,2.70009000092722,5.85417564191487,4.53142408984205,6.21312374102184,9.75601067291261,7.58147259461959,9.04888110496911,9.96737539980005,12.5767897576789,9.55986243940074,12.2235700290888,7.82933217507798,5.13470735346904,8.84440241173291,8.87177549615839,6.22466926574051,7.49132059759059,7.23484222175023,6.66251439885114,7.1444053692461,8.69132444586416,6.75182271622968,6.59337441285291,7.94874168725746,5.82877729055206,8.69631450180754,7.62995807831427,6.68593516508711,6.68176600948847,6.8537832392258,7.86590283352922,6.83981249738391,7.87663860305998,4.48913817326191,6.16902094245706,7.2893316957917,5.72923460437565,6.8172210121825,7.71626443924566,11.7410971630835,8.4215379040347,8.16510005383534,6.31251495827183,9.70602244125868,9.97031693167812|short_description=p2@Map2k2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=26396 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=Q63932 | |||
|association_with_transcript=3bp_to_ENSMUST00000143517_5end | |||
|cluster_id=chr10:80568663..80568677,+ | |||
|description=CAGE_peak_2_at_Map2k2_5end | |||
|id=chr10:80568663..80568677,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.18e-12!23;CL:0000337!5.18e-12!23;CL:0000393!3.23e-10!39;CL:0000211!3.23e-10!39;CL:0000055!4.18e-10!50;CL:0002319!6.42e-10!43;CL:0000221!2.51e-09!44;CL:0000133!2.51e-09!44;CL:0000540!3.11e-09!33;CL:0000047!3.11e-09!33;CL:0000031!3.11e-09!33;CL:0000404!3.11e-09!33;CL:0002321!2.42e-07!70;CL:0000220!2.42e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.18e-12,23;CL:0000337,5.18e-12,23;CL:0000393,3.23e-10,39;CL:0000211,3.23e-10,39;CL:0002319,6.42e-10,43;CL:0000221,2.51e-09,44;CL:0000133,2.51e-09,44;CL:0000540,3.11e-09,33;CL:0000047,3.11e-09,33;CL:0000031,3.11e-09,33;CL:0000404,3.11e-09,33;CL:0002321,2.42e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.59e-11!73;UBERON:0005743!7.59e-11!73;UBERON:0000073!1.03e-09!75;UBERON:0001016!1.03e-09!75;UBERON:0001049!3.43e-08!52;UBERON:0005068!3.43e-08!52;UBERON:0006241!3.43e-08!52;UBERON:0007135!3.43e-08!52;UBERON:0002346!6.03e-07!71;UBERON:0003075!6.03e-07!71;UBERON:0007284!6.03e-07!71;UBERON:0004121!6.18e-07!102;UBERON:0000924!6.18e-07!102;UBERON:0006601!6.18e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.59e-11,73;UBERON:0010314,2.24e-10,92;UBERON:0001016,1.03e-09,75;UBERON:0000073,9.31e-09,54;UBERON:0001049,3.43e-08,52;UBERON:0005068,3.43e-08,52;UBERON:0006241,3.43e-08,52;UBERON:0007135,3.43e-08,52;UBERON:0002346,8.23e-08,64;UBERON:0003075,8.23e-08,64;UBERON:0007284,8.23e-08,64;UBERON:0004121,1.54e-07,95;UBERON:0000924,1.54e-07,95;UBERON:0006601,1.54e-07,95 | |||
|phase1_expression=6.56610273129655,7.32848356042658,6.3699893514535,9.67885476181856,12.0214975187123,5.87577451691614,5.60670337429262,4.51931632045517,2.39340827657833,2.34064526321993,3.25314139628459,3.43020283679947,4.96482116800497,5.24522414513984,4.66353666541928,4.656931149966,6.29605690315332,3.62781490161973,3.42786084014347,5.94145512517242,11.9911039113008,3.57447424323187,4.70159620450084,8.63959083084396,6.65286915094793,9.76194338995534,7.32295393470427,5.60225204983311,7.22088993934221,8.82105454159758,5.54326276638262,8.89042942843484,9.22597181376855,0,3.46621943701529,4.48833542467929,4.69589519403449,11.3003540298965,16.4080422349998,9.42342739152837,17.0587131528994,10.9287277593351,11.6522484727477,8.43508680436368,9.52943153463437,8.25960384727567,21.1245662973971,12.4274339136855,7.46933021297204,6.22175677037707,10.9189408867783,17.2503077237966,9.2280433331755,4.35217285206807,2.01656279485478,8.48956138918625,9.74213695791773,11.8604581223812,23.8733423814325,29.6234948392338,35.494558596346,14.9091594110418,14.2287167377782,22.9474427906757,31.6437236021432,27.7087244828979,15.8788058574755,18.4424786554346,13.3759599877936,16.3357185381346,15.1433972172995,15.7108041422092,20.7616428494517,15.6788222995141,12.0765293482978,24.8189072384706,15.4162233399144,7.53355294702608,10.4452442614246,22.6844414895933,17.0167017100482,18.7528813400434,10.6089539620525,8.4414391504752,9.93188610549266,23.2756582524197,16.5151149726959,18.6399445825301,4.24066682665831,3.55186332501892,4.34796733052517,1.72084775396277,4.75979933595425,3.77792234146472,2.59910566979068,2.24013443548668,7.8648875273781,9.20323741921512,9.35229616570328,8.12681021373782,4.78867627240714,11.5493829672886,12.7402619853323,21.3320010945999,8.22665955842614,9.12095515710355,14.1546844604139,5.48082622651488,3.6251303710604,7.71899123137089,9.36820764537134,6.08930956624282,6.22661842591358,6.0289056221049,4.46837087115678,7.6656620711102,5.93267922562497,8.6759614151947,7.96149496754887,7.76480879747564,7.72945314611377,6.78825354389311,11.1835056730873,7.31951992528868,7.74952815209784,8.43008282188352,2.39630249011841,2.39961092397363,2.03312363316904,14.5296920222678,6.40500843946077,12.3141265070607,7.30062144807561,5.8814555185976,9.55825004973976,6.65189178577806,5.09196819251581,5.22509276562391,5.55990068554084,11.7847439296425,8.71806967850115,7.58676944630461,6.66229880279792,5.57607825992146,6.5995404176788,6.79002717509704,8.71426038405478,9.8307280880826,13.1496475689034,7.18603104637713,7.38994721488585,8.76782929710299,5.56094498451196,6.268538997399,5.96768195583036,8.16040493955822,0.702213187313235,3.3455227924913,4.83077948972507,9.32065976409758,12.8989332989603,10.8037236876609,8.28606574548236,11.0187969778546,11.415766353666,6.51095045301142,8.58474884478781,10.1585847859437,11.3546296440302,7.38753588355929,8.431156192769,11.1111990443253,9.44065495751518,13.9574675510787,8.20130799400096,12.4514580978934,7.26921322564356,3.70230793328962,6.39864751605702,3.94802342162745,6.31450560478257,6.45387278794696,6.0042071838115,5.51654315726422,5.21981967698963,6.42325923423642,3.77002813200404,4.37704238490532,6.04388670069272,6.29173586057955,3.8904848977445,4.97853183135918,9.67306294860717,6.16941968092536,9.01661885384643,6.31319116320474,5.62462212786115,6.17195215034803,4.67950374719504,4.42830443938806,3.45397201251025,4.07210640941942,5.03969466048153,5.6727335943472,6.87956482896211,5.62155280962134,8.92584534109413,7.71766911207734,6.87489799809833,5.17853047411459,2.91843408195064,6.86403532970204,2.87536413054709,6.69853705803306,4.36852742360385,4.54641980304801,3.22915344339442,3.37710464954357,7.02062122633098,11.1799932944586,6.51859905768104,8.65699937453459,4.92849521405854,5.52770649557992,5.2369600994923,5.65887578787617,5.35959489961049,4.65075848262427,5.89982644032702,5.73521601505083,5.52591941970866,4.19482269886384,24.1266054302836,26.6513785071168,6.88469982226651,5.79467167239938,8.66973185934077,8.55645312123083,4.91804836130026,15.9056684138755,7.57219726599016,7.41833614163613,5.60100834105277,4.54040716109849,6.46116154838943,9.05844898524264,6.8817819284732,9.64444331107329,9.09161889277004,5.78378369559253,6.38730383437209,7.30068975035746,5.86393053672874,8.57844639457184,11.9470624505967,10.9251286269742,11.4882951646605,7.92141334974772,9.7449624650655,6.7635732547664,5.16856586336442,6.90714086007261,3.56497378384721,6.32073515871632,2.10837217149998,5.15677716240934,8.17055053809091,9.72329907769075,13.5826617971892,12.6458850668639,7.98031051390231,11.5939731441346,6.58196082408484,13.700922710157,7.74416636610244,7.20229040936989,7.05690873775878,7.09010887648364,3.55221738730992,4.52346936961169,4.29740438411291,4.26766339337159,3.78925087618806,8.52956389248344,7.34744787430767,7.01715351074956,3.88908507476395,4.70921142511728,5.05768642567793,5.49067615695654,3.90950388985867,1.6794174278839,2.48759952847963,7.63736494412091,10.4390877881775,6.30290348093231,4.96824567780286,6.48173717644853,4.58561383866973,5.52943820177765,4.1326727862668,7.0674104335688,5.96228877142247,8.07741107013003,77.2259325997341,8.82147621659475,12.7403037651965,10.1114617938905,9.42866711387437,9.46154302748358,7.04143431874524,7.29144555126121,7.96931017635402,18.1188090619505,29.0910306320444,4.4241556887945,7.9062833963164,7.49789987303239,4.54722880422283,4.65469408735452,3.3775830312815,3.4856680360791,2.65841148914239,1.71642964911851,2.13379058634,2.31900225814733,3.31356794515158,2.5977197242889,3.03879945672079,11.789979947991,8.21348027484039,7.89481938163386,6.04384618910682,5.40930863290133,6.56888664079137,5.31139710375069,7.5028932677673,15.0471631210609,5.64751842617067,10.1271552031579,8.59343270159095,6.18671456437275,8.22099023724771,3.7769694869485,2.70009000092722,5.85417564191487,4.53142408984205,6.21312374102184,9.75601067291261,7.58147259461959,9.04888110496911,9.96737539980005,12.5767897576789,9.55986243940074,12.2235700290888,7.82933217507798,5.13470735346904,8.84440241173291,8.87177549615839,6.22466926574051,7.49132059759059,7.23484222175023,6.66251439885114,7.1444053692461,8.69132444586416,6.75182271622968,6.59337441285291,7.94874168725746,5.82877729055206,8.69631450180754,7.62995807831427,6.68593516508711,6.68176600948847,6.8537832392258,7.86590283352922,6.83981249738391,7.87663860305998,4.48913817326191,6.16902094245706,7.2893316957917,5.72923460437565,6.8172210121825,7.71626443924566,11.7410971630835,8.4215379040347,8.16510005383534,6.31251495827183,9.70602244125868,9.97031693167812 | |||
|short_description=p2@Map2k2 | |||
}} |
Latest revision as of 10:38, 26 September 2015
Short description: | p2@Map2k2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Map2k2_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 3bp_to_ENSMUST00000143517_5end |
EntrezGene: | Map2k2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.18e-12 | 23 |
neuroblast (sensu Vertebrata) | 5.18e-12 | 23 |
electrically responsive cell | 3.23e-10 | 39 |
electrically active cell | 3.23e-10 | 39 |
neural cell | 6.42e-10 | 43 |
ectodermal cell | 2.51e-09 | 44 |
neurectodermal cell | 2.51e-09 | 44 |
neuron | 3.11e-09 | 33 |
neuronal stem cell | 3.11e-09 | 33 |
neuroblast | 3.11e-09 | 33 |
electrically signaling cell | 3.11e-09 | 33 |
embryonic cell | 2.42e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 7.59e-11 | 73 |
structure with developmental contribution from neural crest | 2.24e-10 | 92 |
nervous system | 1.03e-09 | 75 |
regional part of nervous system | 9.31e-09 | 54 |
neural tube | 3.43e-08 | 52 |
neural rod | 3.43e-08 | 52 |
future spinal cord | 3.43e-08 | 52 |
neural keel | 3.43e-08 | 52 |
neurectoderm | 8.23e-08 | 64 |
neural plate | 8.23e-08 | 64 |
presumptive neural plate | 8.23e-08 | 64 |
ectoderm-derived structure | 1.54e-07 | 95 |
ectoderm | 1.54e-07 | 95 |
presumptive ectoderm | 1.54e-07 | 95 |