FFCP PHASE1:Hg19::chr2:235405679..235405739,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10123 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=698 | |||
|TSSclassifier=strong | |||
|UniProt=P56559 | |||
|association_with_transcript=0bp_to_ENST00000390645,NM_005737,uc002vvn.2_5end | |||
|cluster_id=chr2:235405679..235405739,- | |||
|coexpression_cluster_id=C4201 | |||
|description=CAGE_peak_1_at_ARL4C_5end | |||
|id=chr2:235405679..235405739,- | |||
|ontology_enrichment_celltype=CL:0000738!8.89e-17!140;CL:0002057!4.31e-12!42;CL:0000084!2.92e-11!25;CL:0000827!2.92e-11!25;CL:0000766!2.95e-11!76;CL:0000791!1.18e-10!18;CL:0000789!1.18e-10!18;CL:0002420!1.18e-10!18;CL:0002419!1.18e-10!18;CL:0000790!1.18e-10!18;CL:0002031!1.29e-10!124;CL:0002087!1.32e-10!119;CL:0000557!6.84e-10!71;CL:0000860!2.28e-09!45;CL:0002009!1.45e-08!65;CL:0002194!1.03e-07!63;CL:0000576!1.03e-07!63;CL:0000040!1.03e-07!63;CL:0000559!1.03e-07!63;CL:0000839!1.39e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000084;3.19e-11;25!CL:0000791;1.09e-10;18!CL:0000789;1.09e-10;18!CL:0002419;1.09e-10;18!CL:0000860;1.15e-08;33!CL:0002057;1.15e-08;33!CL:1000507;3.13e-07;10!CL:1000494;3.13e-07;10!CL:0000576;4.20e-07;48!CL:0000473;6.46e-07;39!CL:0000234;6.46e-07;39!CL:0000766;6.75e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.92e-19,136;CL:0000766,5.10e-14,72;CL:0002087,1.19e-12,115;CL:0002031,1.26e-12,120;CL:0000557,1.54e-12,67;CL:0000860,4.10e-12,42;CL:0002057,4.10e-12,42;CL:0000473,2.16e-11,48;CL:0000234,2.16e-11,48;CL:0000084,3.33e-11,25;CL:0000827,3.33e-11,25;CL:0002009,4.12e-11,61;CL:0000791,1.13e-10,18;CL:0000789,1.13e-10,18;CL:0002420,1.13e-10,18;CL:0002419,1.13e-10,18;CL:0000790,1.13e-10,18;CL:0002194,3.88e-10,59;CL:0000576,3.88e-10,59;CL:0000040,3.88e-10,59;CL:0000559,3.88e-10,59;CL:0000839,7.70e-10,66;CL:1000507,3.20e-07,10;CL:1000494,3.20e-07,10;CL:0000037,5.24e-07,168;CL:0000988,9.94e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;1.09e-10;18!CL:0002057;1.78e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.94e-12!102;UBERON:0003061!6.94e-12!102;UBERON:0002193!1.29e-09!112;UBERON:0002371!1.95e-08!80;UBERON:0004765!7.08e-08!101;UBERON:0001434!7.08e-08!101;UBERON:0001474!9.31e-08!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;3.13e-07;10!UBERON:0009773;3.13e-07;10!UBERON:0001231;3.13e-07;10!UBERON:0004810;3.13e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.47e-14,98;UBERON:0003061,3.47e-14,98;UBERON:0002193,1.88e-11,108;UBERON:0002371,1.18e-10,76;UBERON:0001474,8.33e-10,82;UBERON:0002405,9.29e-10,93;UBERON:0004765,5.98e-09,90;UBERON:0001434,6.98e-09,100;UBERON:0004810,3.20e-07,10 | |||
|phase1_expression=1.63510541343501,0.856402095563933,1.69145284915165,0,1.78784437770915,2.61701557230111,0,1.26343974685366,1.04474251279935,1.72013755551056,1.39560233594486,5.89791704751465,10.8144461073666,2.84662611808107,4.30816588446291,2.6893005858071,1.80808358407193,2.19093027116212,0.975865597581014,39.1524964684186,26.5200898617529,38.5549307418048,24.3300589061398,31.6179921918363,53.3556218277912,0.152826811495903,0.164201178899891,0.0787107813136792,185.667938672683,223.772539090675,105.73941222488,11.0330546937471,12.04823675113,2.21852406100073,0,0,8.22081230137572,124.094971511141,122.933746299197,108.28842448721,22.6154628982324,20.4053009591957,15.196958490417,47.5452240809177,56.3035156096326,19.4067248950253,51.599246193062,93.3351105809544,53.2694957939578,39.7015501404568,58.9169625016931,21.5198829198613,37.5772792002914,52.2842593702899,27.0852973188684,98.074258901697,100.702369371345,36.4052044801037,31.8327248065739,52.3114314134033,24.2948107803636,37.2731969210989,54.6530421883271,17.0489900213078,4.93355705668593,10.7803192691317,4.35975574296902,50.7522303818621,85.0017157024928,26.062661364614,11.502590550034,9.57521853567668,3.79754864929061,39.927249112957,23.1738686961897,36.270945672949,30.7780449341397,12.0141514273205,24.7517403513503,33.0614782739848,10.1447505371536,17.7184229151695,1.75996244461323,4.36910889009705,11.5636203002262,9.81479511902967,9.20910770182829,4.02326707968138,9.25462821898807,5.72432252721218,28.4606484554724,42.2810776347076,37.0805031281472,21.1474125726441,54.369330609209,3.16060901730092,150.286264366968,233.841403835753,339.859277846189,110.008713967066,123.850461320764,52.0792586308207,75.9824240790854,73.5309015442146,101.049826263869,45.8575161788096,49.5571070689979,81.7222619849807,103.267121962543,45.0559858614073,60.7970039128866,55.9319955468651,100.834862950201,41.4688283539055,68.9934457112847,72.1780512983497,152.904976947167,61.5093127413908,78.4361045260459,38.2278497188916,33.2052561466773,45.621698133522,33.5782515543433,34.3004117893841,38.7285252312272,39.3050238393068,52.552191802947,223.581878236228,255.137946777466,184.361466142803,12.1903433156981,4.02420515822182,2.68511379871414,4.3372698286148,14.5387994084408,9.84956328933601,7.95285947051099,4.86634870302636,41.1226454663695,55.2106199681784,56.7412715577594,7.26933869012305,27.3221466219407,20.763928795928,17.2010118636982,12.8856005601458,10.1048049994338,72.9781310374346,69.2113842043955,24.5161950877513,1.39133685156694,0,4.51282652089873,2.26123176769604,0.419499436209906,0.275118041940067,1.8809546988313,5.68516870172524,5.33649394030065,1.67360306382335,9.66790361061953,1.52054421143703,18.3046543161127,1.47065232138347,0,2.05389375053383,1.57170560838319,1.80178368773316,0,2.84779697870439,2.5648244150257,35.5807127077371,54.2892369807656,13.5189156164186,8.44852317882041,7.97772223486853,9.66587019936497,2.58152958673932,18.7974242565129,27.473202406973,4.2699598291882,16.0333906471154,3.11211035399766,2.02066008104532,1.30769522490767,1.96764655938411,2.88087962239999,2.10889288650417,1.5608003841516,3.99330275081114,5.08125513876124,1.40921398372518,4.53244244230768,4.07307339436521,2.24569588380383,7.37005903870608,5.9928953081944,17.8200428592308,22.0067567057916,0.910161361938026,1.43723628363248,5.89176398839232,6.88151859295803,1.6623846929051,16.6811495934718,29.4228283967059,28.3949931333468,5.67160915800105,1.61450672119976,16.8710337166668,4.23863802319124,0.900273288253207,4.74041634496819,1.54584324027377,7.81690796592677,1.68776332241266,1.16924406193438,0.757301322732344,8.28449087780694,6.46584227275248,0.710019185033229,0.503760491138201,2.20428770003634,39.038692338986,23.7289124914026,37.5714019959595,1.58565817968474,4.77107165957347,3.83440011469411,11.8173602717522,5.2987378683882,5.47466038613745,9.38697193978896,19.9404690839794,9.66944449467364,2.3218396401599,5.0531563716871,1.77460200059766,2.02301628093722,2.41011029883482,1.98529150918309,1.74303555273925,1.18635309555548,2.02246962240247,1.17732879075208,1.15424147083917,10.3341763647451,9.81692416624121,5.3504621473082,1.47008711385542,0,1.96565443335525,5.90789906681404,17.658523976586,5.53447973444011,25.5636037344803,44.558615875902,1.1240175325762,38.3015384888314,18.2399236962303,6.51616610620649,1.03993478527958,15.8764476227801,58.5448545124138,13.2671824486478,2.45422961193825,3.70388410061289,1.52203321787679,3.1608175918371,0.858486162094873,7.38651018262192,1.17002132569619,3.12125440806329,31.8695035555042,20.1578553838631,18.2889875442679,10.8365812470446,24.4132508351728,69.3922649289032,1.97065295158377,13.64750727205,290.881346103703,118.754841615576,159.822920717797,21.398790376461,46.6025879181099,28.1321873304113,13.6857956818164,6.27247705490273,7.20823338825402,9.1464458441785,9.53114216935566,6.10344096366592,11.734125731352,7.23921608243556,0,0.845302752556,19.1475443941107,12.4808924293639,0.514414748524284,4.25547396069835,1.0656887160644,3.860405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| |||
|short_description=p1@ARL4C | |||
}} |
Latest revision as of 01:24, 16 September 2015
Short description: | p1@ARL4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARL4C_5end |
Coexpression cluster: | C4201_immature_CD4_CD8_Natural_Mast_Basophils_Dendritic |
Association with transcript: | 0bp_to_ENST00000390645, NM_005737, uc002vvn.2_5end |
EntrezGene: | ARL4C |
HGNC: | 698 |
UniProt: | P56559 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.92e-19 | 136 |
myeloid leukocyte | 5.10e-14 | 72 |
nongranular leukocyte | 1.19e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.26e-12 | 120 |
granulocyte monocyte progenitor cell | 1.54e-12 | 67 |
classical monocyte | 4.10e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.10e-12 | 42 |
defensive cell | 2.16e-11 | 48 |
phagocyte | 2.16e-11 | 48 |
T cell | 3.33e-11 | 25 |
pro-T cell | 3.33e-11 | 25 |
macrophage dendritic cell progenitor | 4.12e-11 | 61 |
mature alpha-beta T cell | 1.13e-10 | 18 |
alpha-beta T cell | 1.13e-10 | 18 |
immature T cell | 1.13e-10 | 18 |
mature T cell | 1.13e-10 | 18 |
immature alpha-beta T cell | 1.13e-10 | 18 |
monopoietic cell | 3.88e-10 | 59 |
monocyte | 3.88e-10 | 59 |
monoblast | 3.88e-10 | 59 |
promonocyte | 3.88e-10 | 59 |
myeloid lineage restricted progenitor cell | 7.70e-10 | 66 |
kidney tubule cell | 3.20e-07 | 10 |
nephron tubule epithelial cell | 3.20e-07 | 10 |
hematopoietic stem cell | 5.24e-07 | 168 |
hematopoietic cell | 9.94e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.47e-14 | 98 |
blood island | 3.47e-14 | 98 |
hemolymphoid system | 1.88e-11 | 108 |
bone marrow | 1.18e-10 | 76 |
bone element | 8.33e-10 | 82 |
immune system | 9.29e-10 | 93 |
skeletal element | 5.98e-09 | 90 |
skeletal system | 6.98e-09 | 100 |
nephron tubule epithelium | 3.20e-07 | 10 |