FFCP PHASE1:Hg19::chr2:232135672..232135717,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80210 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20730 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000428662_5end | |||
|cluster_id=chr2:232135672..232135717,+ | |||
|coexpression_cluster_id=C233 | |||
|description=CAGE_peak_5_at_ARMC9_5end | |||
|id=chr2:232135672..232135717,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.14e-10;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;8.24e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,7.05e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.20e-18!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;1.61e-13;1!UBERON:0000996;5.70e-13;1!UBERON:0000013;2.14e-10;5!UBERON:0002410;2.14e-10;5!UBERON:0001255;4.04e-07;2!UBERON:0000007;4.04e-07;2!UBERON:0001556;4.04e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,1.61e-13,1;UBERON:0000996,2.95e-13,1;UBERON:0007023,3.08e-13,114;UBERON:0000013,1.77e-10,5;UBERON:0002410,1.77e-10,5;UBERON:0000162,4.16e-08,14;UBERON:0001353,4.16e-08,14;UBERON:0000163,4.16e-08,14;UBERON:0006866,4.16e-08,14;UBERON:0000164,4.16e-08,14;UBERON:0000931,4.16e-08,14;UBERON:0004122,1.34e-07,15;UBERON:0000007,3.48e-07,2;UBERON:0001255,3.70e-07,2;UBERON:0001556,3.70e-07,2;UBERON:0005156,7.94e-07,59;UBERON:0000990,7.94e-07,59 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,1.83370705696798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0.285826432630578,0,0,0,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.199945982364114,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0.35667105148125,0.354761064070598,0,0,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0.828851746593443,0,0,0,0,0,0,0,1.7755813014648,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0.241192877250816,0,0,0,0,0,0,1.76985594558733,0.227884111694002,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14994833854341,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,2.99004755189545,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0.928067519756987,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,2.04867141653695,0,1.85656384926424,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,5.64077462619429,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,1.82089681270989,0.227662191351298,0.0887023701626388,0.115233987555779,0,0,0,0,0,1.49136876415977,0,0,0,0,0,1.71543706023975,0,0,0,0,0,0,0,0,0,0.170426809518315,0.423387050190929,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,3.43207650455468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13668047327359,0.803892390468535,0,0,0.426467963801962,0.23806443146374,0,0.124149428591716,0,0,0,0.217716747896961,0.684466602170562,0,0.143444410785353,0,0,0,0,0,0,9.04586686953212,0,1.99727032255654,0.402547587182052,0 | |||
|short_description=p5@ARMC9 | |||
}} |
Latest revision as of 18:30, 15 September 2015
Short description: | p5@ARMC9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ARMC9_5end |
Coexpression cluster: | C233_uterus_cervix_ovary_epididymis_colon_rectum_MCF7 |
Association with transcript: | 0bp_to_ENST00000428662_5end |
EntrezGene: | ARMC9 |
HGNC: | 20730 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterus or analog | 1.61e-13 | 1 |
vagina | 2.95e-13 | 1 |
adult organism | 3.08e-13 | 114 |
sympathetic nervous system | 1.77e-10 | 5 |
autonomic nervous system | 1.77e-10 | 5 |
cloaca | 4.16e-08 | 14 |
anal region | 4.16e-08 | 14 |
embryonic cloaca | 4.16e-08 | 14 |
terminal part of digestive tract | 4.16e-08 | 14 |
primitive urogenital sinus | 4.16e-08 | 14 |
proctodeum | 4.16e-08 | 14 |
genitourinary system | 1.34e-07 | 15 |
pituitary gland | 3.48e-07 | 2 |
urinary bladder | 3.70e-07 | 2 |
lower urinary tract | 3.70e-07 | 2 |
reproductive structure | 7.94e-07 | 59 |
reproductive system | 7.94e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 7.05e-09 | 6 |