FFCP PHASE1:Mm9::chr10:70062032..70062049,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=70911|HGNC=|MCL_coexpression_id=1|UniProt=Q8BGT8|association_with_transcript=0bp_to_ENSMUST00000046513,ENSMUST00000163054,NM_178621,uc007fnz.2,uc007foa.2,uc007fob.2_5end|description=CAGE_peak_1_at_Phyhipl_5end|id=chr10:70062032..70062049,-|ontology_enrichment_celltype=CL:0000221!2.38e-14!44;CL:0000133!2.38e-14!44;CL:0002319!2.86e-14!43;CL:0000117!1.08e-12!23;CL:0000337!1.08e-12!23;CL:0000540!2.93e-12!33;CL:0000047!2.93e-12!33;CL:0000031!2.93e-12!33;CL:0000404!2.93e-12!33;CL:0000055!1.23e-10!50;CL:0000393!3.17e-09!39;CL:0000211!3.17e-09!39|ontology_enrichment_celltype_v019_2=CL:0000221,1.62e-15,44;CL:0000133,1.62e-15,44;CL:0002319,1.99e-15,43;CL:0000117,1.04e-13,23;CL:0000337,1.04e-13,23;CL:0000540,3.11e-13,33;CL:0000047,3.11e-13,33;CL:0000031,3.11e-13,33;CL:0000404,3.11e-13,33;CL:0000393,6.16e-09,39;CL:0000211,6.16e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.04e-33!73;UBERON:0005743!7.04e-33!73;UBERON:0000073!9.01e-33!75;UBERON:0001016!9.01e-33!75;UBERON:0004121!2.21e-30!102;UBERON:0000924!2.21e-30!102;UBERON:0006601!2.21e-30!102;UBERON:0002346!1.35e-27!71;UBERON:0003075!1.35e-27!71;UBERON:0007284!1.35e-27!71;UBERON:0001049!4.55e-26!52;UBERON:0005068!4.55e-26!52;UBERON:0006241!4.55e-26!52;UBERON:0007135!4.55e-26!52;UBERON:0000033!1.81e-25!63;UBERON:0000955!1.03e-24!50;UBERON:0006238!1.03e-24!50;UBERON:0002616!5.53e-24!49;UBERON:0003056!5.23e-21!49;UBERON:0003080!5.44e-19!40;UBERON:0002780!2.92e-18!39;UBERON:0001890!2.92e-18!39;UBERON:0006240!2.92e-18!39;UBERON:0002020!4.37e-18!34;UBERON:0002791!5.84e-15!29;UBERON:0003528!5.84e-15!29;UBERON:0001893!5.84e-15!29;UBERON:0007811!6.04e-13!86;UBERON:0000153!3.62e-12!94;UBERON:0000956!9.77e-11!21;UBERON:0001869!9.77e-11!21;UBERON:0000203!9.77e-11!21;UBERON:0002619!3.34e-09!17;UBERON:0003076!1.29e-07!12;UBERON:0003057!1.29e-07!12;UBERON:0002021!2.15e-07!10;UBERON:0000411!2.15e-07!10;UBERON:0001950!2.15e-07!10;UBERON:0000468!3.15e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.47e-36,73;UBERON:0001016,1.24e-35,75;UBERON:0004121,1.61e-32,95;UBERON:0000924,1.61e-32,95;UBERON:0006601,1.61e-32,95;UBERON:0002346,9.71e-31,64;UBERON:0003075,9.71e-31,64;UBERON:0007284,9.71e-31,64;UBERON:0000073,9.33e-30,54;UBERON:0001049,2.60e-28,52;UBERON:0005068,2.60e-28,52;UBERON:0006241,2.60e-28,52;UBERON:0007135,2.60e-28,52;UBERON:0010371,2.34e-25,73;UBERON:0000955,1.43e-24,47;UBERON:0006238,1.43e-24,47;UBERON:0002616,8.63e-24,46;UBERON:0003056,8.73e-23,49;UBERON:0003080,1.39e-20,40;UBERON:0002780,8.74e-20,39;UBERON:0001890,8.74e-20,39;UBERON:0006240,8.74e-20,39;UBERON:0002020,1.35e-19,34;UBERON:0010314,1.34e-18,92;UBERON:0003528,3.51e-16,29;UBERON:0002791,3.51e-16,29;UBERON:0001893,3.51e-16,29;UBERON:0000956,1.42e-11,21;UBERON:0001869,1.42e-11,21;UBERON:0000203,1.42e-11,21;UBERON:0002619,6.70e-10,17;UBERON:0003076,3.62e-08,12;UBERON:0003057,3.62e-08,12;UBERON:0002021,6.30e-08,10;UBERON:0000411,6.30e-08,10;UBERON:0001950,6.30e-08,10|phase1_expression=4.64431656603902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,70.670974115539,0,0,0.159992422793407,0.22940928106717,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0.734187008646726,14.8654355426127,15.4797861030117,5.05278220289285,6.80504646759992,21.1379496654297,38.8131923785423,0,0,0,0.257259436035947,0.286533439938757,0,112.487952237936,168.219131408506,122.963292280199,2.03306719241479,1.77858959222228,0,0.988866362566974,0.7104801149461,119.240843986325,116.418146512431,19.0788886647599,23.7610451463776,20.6118462124354,261.656301713884,282.711732418065,34.542405378617,26.2616590589968,41.3648453974509,338.055754668123,226.261963086953,271.883563863551,94.562468302549,85.9068973426627,76.0533521012869,302.634370917497,209.347690931785,217.584704834178,308.181500405456,238.0454502961,141.290779935578,2.42323818666189,6.42358260907677,0.289864488701678,0,0,1.07940638327563,0,0,16.7128859956785,0,0,0,8.87313544593087,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,13.35951392713,0,4.00793775475027,2.4287945747259,4.87144765299426,5.5347719341454,4.6724018571313,3.64524992120685,1.63366568728578,6.42706916109372,0.289198713839823,0,0.323533699894818,0,0.484875253135222,0,194.113668418656,122.526323485871,0.255457055208591,0,0,0,346.61553958276,259.86034240098,104.670075310016,294.284574085524,238.326806231868,287.370865625872,265.588947641919,0.509196819251581,0.248813941220186,0.758168275301024,34.3020225094953,5.33493816147085,11.2652031172402,13.3245976055958,10.8507468841715,18.8461102649178,23.7010382526972,18.4592397382666,77.0936044802267,0.431135985865684,2.26927296201383,1.40760899331159,2.19195732427575,1.39023624612799,6.61679116392116,3.70407845534298,0.995171334092466,0,0,0,0.621377317606506,2.34526059981096,1.2604344302271,1.65721314909647,0.787056926989615,0.617068451549513,0.232533944750408,0.268273401399619,0.116765342367169,0.329119699826961,0,0.162137619091711,0,0.219550115291051,0,231.739523317668,82.7353083529447,0,0.528901133327089,2.13288250535234,0.928946687441754,1.9330119198314,1.00841762311671,1.11189021922435,0.951128130562796,0.474529061544512,2.14108641141214,0.502670417600539,1.1937388322469,0.974820435595601,0,0,0,5.87970492954553,5.59817711787671,6.76246414038483,7.53509913027663,11.6371492300575,15.7104236554314,14.2914573900821,30.7029107797573,18.6828486131236,26.2835959153435,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.568474235311454,0.325929952884052,0.169745085775188,0.234690248288502,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,382.913157120884,353.979293508454,0,0,4.10160685241134,6.63745865304285,10.3403230911743,5.25731355495614,11.8083297263669,13.0215204162863,4.45291771842384,6.72188473196017,5.53402889125133,286.618614248252,0.567760340833074,0.35613120733451,0.488660878060728,1.15479086080775,1.32745138339963,1.94224508923985,1.209294227859,1.32023555829129,2.06711325016541,1.22974059177571,0.258428293168221,2.54473610634254,0.712994756769443,0.316036757935816,1.05418608574999,0,60.2578102184205,6.48219938512717,6.33857550535497,12.6458850668639,25.5369936444874,26.9336914579127,25.6696472139309,39.5804433848979,5.63212099352905,37.70610861376,1.98475558249466,0.65954501176592,6.29711264114032,0.422190474497091,0.358117032009409,0.164140899745061,0.291480836629851,411.458745161321,0,0.412773735926445,0,0,0,0,0,0,0.138199973804424,0,1.73984796469624,2.43983360552218,1.40406943068342,1.88179466413022,3.71216358368502,2.83215127408124,2.39695021603474,3.92633912976044,0.648074866458964,0,277.336925832622,0.747582730219894,0.66183396182839,6.41688921535357,5.55387240954244,3.71703476079712,1.99507305697782,1.3020438484395,6.39642000996836,54.8395954275034,109.451402377989,0,1.01362607645082,1.1298205288131,0.51968329191118,0.358053391334963,0.993406773906324,0.600977247599844,0.590758108698309,0.504832249740738,0.228620419965,0.403304740547362,0.487289403698762,0.0962118416403295,0.584384510907845,1.58711268530648,1.33191572024439,1.61484941897056,3.02192309455341,1.9318959403219,5.81815673898664,4.2124873581471,2.35805216986972,0,294.800461846109,270.210913829713,270.406682343395,196.600040601179,251.425284755826,284.028105418527,229.507650078814,270.643043137756,261.463169983886,277.519527098975,20.549894821667,28.3307660114732,19.8050982674796,14.1001895899611,22.8478347264501,20.7743164548516,18.2242316797324,19.3672953804561,23.4271023002025,18.9522908822848,19.010947491768,18.4853814558355,16.761829837109,16.4544641680514,16.483979590261,12.3836359733599,15.8761526544452,14.2752823143142,21.0163809409686,16.7806768953213,17.4863318716562,15.4403951358624,15.4983523465759,17.8776092457764,15.6221571489449,15.7383170678518,17.3781574229134,17.8887403777733,15.8890813199658,23.0068331379673,14.3548371930251,13.5936185678278,14.3230865109391,14.2541893891089,14.8538090455479,52.9598425228445,16.609144199624,19.5532659183951,15.876931561714,11.6913452133343,13.216466630364|short_description=p1@Phyhipl}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70911 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BGT8 | |||
|association_with_transcript=0bp_to_ENSMUST00000046513,ENSMUST00000163054,NM_178621,uc007fnz.2,uc007foa.2,uc007fob.2_5end | |||
|cluster_id=chr10:70062032..70062049,- | |||
|description=CAGE_peak_1_at_Phyhipl_5end | |||
|id=chr10:70062032..70062049,- | |||
|ontology_enrichment_celltype=CL:0000221!2.38e-14!44;CL:0000133!2.38e-14!44;CL:0002319!2.86e-14!43;CL:0000117!1.08e-12!23;CL:0000337!1.08e-12!23;CL:0000540!2.93e-12!33;CL:0000047!2.93e-12!33;CL:0000031!2.93e-12!33;CL:0000404!2.93e-12!33;CL:0000055!1.23e-10!50;CL:0000393!3.17e-09!39;CL:0000211!3.17e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.62e-15,44;CL:0000133,1.62e-15,44;CL:0002319,1.99e-15,43;CL:0000117,1.04e-13,23;CL:0000337,1.04e-13,23;CL:0000540,3.11e-13,33;CL:0000047,3.11e-13,33;CL:0000031,3.11e-13,33;CL:0000404,3.11e-13,33;CL:0000393,6.16e-09,39;CL:0000211,6.16e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.04e-33!73;UBERON:0005743!7.04e-33!73;UBERON:0000073!9.01e-33!75;UBERON:0001016!9.01e-33!75;UBERON:0004121!2.21e-30!102;UBERON:0000924!2.21e-30!102;UBERON:0006601!2.21e-30!102;UBERON:0002346!1.35e-27!71;UBERON:0003075!1.35e-27!71;UBERON:0007284!1.35e-27!71;UBERON:0001049!4.55e-26!52;UBERON:0005068!4.55e-26!52;UBERON:0006241!4.55e-26!52;UBERON:0007135!4.55e-26!52;UBERON:0000033!1.81e-25!63;UBERON:0000955!1.03e-24!50;UBERON:0006238!1.03e-24!50;UBERON:0002616!5.53e-24!49;UBERON:0003056!5.23e-21!49;UBERON:0003080!5.44e-19!40;UBERON:0002780!2.92e-18!39;UBERON:0001890!2.92e-18!39;UBERON:0006240!2.92e-18!39;UBERON:0002020!4.37e-18!34;UBERON:0002791!5.84e-15!29;UBERON:0003528!5.84e-15!29;UBERON:0001893!5.84e-15!29;UBERON:0007811!6.04e-13!86;UBERON:0000153!3.62e-12!94;UBERON:0000956!9.77e-11!21;UBERON:0001869!9.77e-11!21;UBERON:0000203!9.77e-11!21;UBERON:0002619!3.34e-09!17;UBERON:0003076!1.29e-07!12;UBERON:0003057!1.29e-07!12;UBERON:0002021!2.15e-07!10;UBERON:0000411!2.15e-07!10;UBERON:0001950!2.15e-07!10;UBERON:0000468!3.15e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.47e-36,73;UBERON:0001016,1.24e-35,75;UBERON:0004121,1.61e-32,95;UBERON:0000924,1.61e-32,95;UBERON:0006601,1.61e-32,95;UBERON:0002346,9.71e-31,64;UBERON:0003075,9.71e-31,64;UBERON:0007284,9.71e-31,64;UBERON:0000073,9.33e-30,54;UBERON:0001049,2.60e-28,52;UBERON:0005068,2.60e-28,52;UBERON:0006241,2.60e-28,52;UBERON:0007135,2.60e-28,52;UBERON:0010371,2.34e-25,73;UBERON:0000955,1.43e-24,47;UBERON:0006238,1.43e-24,47;UBERON:0002616,8.63e-24,46;UBERON:0003056,8.73e-23,49;UBERON:0003080,1.39e-20,40;UBERON:0002780,8.74e-20,39;UBERON:0001890,8.74e-20,39;UBERON:0006240,8.74e-20,39;UBERON:0002020,1.35e-19,34;UBERON:0010314,1.34e-18,92;UBERON:0003528,3.51e-16,29;UBERON:0002791,3.51e-16,29;UBERON:0001893,3.51e-16,29;UBERON:0000956,1.42e-11,21;UBERON:0001869,1.42e-11,21;UBERON:0000203,1.42e-11,21;UBERON:0002619,6.70e-10,17;UBERON:0003076,3.62e-08,12;UBERON:0003057,3.62e-08,12;UBERON:0002021,6.30e-08,10;UBERON:0000411,6.30e-08,10;UBERON:0001950,6.30e-08,10 | |||
|phase1_expression=4.64431656603902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,70.670974115539,0,0,0.159992422793407,0.22940928106717,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0.734187008646726,14.8654355426127,15.4797861030117,5.05278220289285,6.80504646759992,21.1379496654297,38.8131923785423,0,0,0,0.257259436035947,0.286533439938757,0,112.487952237936,168.219131408506,122.963292280199,2.03306719241479,1.77858959222228,0,0.988866362566974,0.7104801149461,119.240843986325,116.418146512431,19.0788886647599,23.7610451463776,20.6118462124354,261.656301713884,282.711732418065,34.542405378617,26.2616590589968,41.3648453974509,338.055754668123,226.261963086953,271.883563863551,94.562468302549,85.9068973426627,76.0533521012869,302.634370917497,209.347690931785,217.584704834178,308.181500405456,238.0454502961,141.290779935578,2.42323818666189,6.42358260907677,0.289864488701678,0,0,1.07940638327563,0,0,16.7128859956785,0,0,0,8.87313544593087,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,13.35951392713,0,4.00793775475027,2.4287945747259,4.87144765299426,5.5347719341454,4.6724018571313,3.64524992120685,1.63366568728578,6.42706916109372,0.289198713839823,0,0.323533699894818,0,0.484875253135222,0,194.113668418656,122.526323485871,0.255457055208591,0,0,0,346.61553958276,259.86034240098,104.670075310016,294.284574085524,238.326806231868,287.370865625872,265.588947641919,0.509196819251581,0.248813941220186,0.758168275301024,34.3020225094953,5.33493816147085,11.2652031172402,13.3245976055958,10.8507468841715,18.8461102649178,23.7010382526972,18.4592397382666,77.0936044802267,0.431135985865684,2.26927296201383,1.40760899331159,2.19195732427575,1.39023624612799,6.61679116392116,3.70407845534298,0.995171334092466,0,0,0,0.621377317606506,2.34526059981096,1.2604344302271,1.65721314909647,0.787056926989615,0.617068451549513,0.232533944750408,0.268273401399619,0.116765342367169,0.329119699826961,0,0.162137619091711,0,0.219550115291051,0,231.739523317668,82.7353083529447,0,0.528901133327089,2.13288250535234,0.928946687441754,1.9330119198314,1.00841762311671,1.11189021922435,0.951128130562796,0.474529061544512,2.14108641141214,0.502670417600539,1.1937388322469,0.974820435595601,0,0,0,5.87970492954553,5.59817711787671,6.76246414038483,7.53509913027663,11.6371492300575,15.7104236554314,14.2914573900821,30.7029107797573,18.6828486131236,26.2835959153435,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.568474235311454,0.325929952884052,0.169745085775188,0.234690248288502,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,382.913157120884,353.979293508454,0,0,4.10160685241134,6.63745865304285,10.3403230911743,5.25731355495614,11.8083297263669,13.0215204162863,4.45291771842384,6.72188473196017,5.53402889125133,286.618614248252,0.567760340833074,0.35613120733451,0.488660878060728,1.15479086080775,1.32745138339963,1.94224508923985,1.209294227859,1.32023555829129,2.06711325016541,1.22974059177571,0.258428293168221,2.54473610634254,0.712994756769443,0.316036757935816,1.05418608574999,0,60.2578102184205,6.48219938512717,6.33857550535497,12.6458850668639,25.5369936444874,26.9336914579127,25.6696472139309,39.5804433848979,5.63212099352905,37.70610861376,1.98475558249466,0.65954501176592,6.29711264114032,0.422190474497091,0.358117032009409,0.164140899745061,0.291480836629851,411.458745161321,0,0.412773735926445,0,0,0,0,0,0,0.138199973804424,0,1.73984796469624,2.43983360552218,1.40406943068342,1.88179466413022,3.71216358368502,2.83215127408124,2.39695021603474,3.92633912976044,0.648074866458964,0,277.336925832622,0.747582730219894,0.66183396182839,6.41688921535357,5.55387240954244,3.71703476079712,1.99507305697782,1.3020438484395,6.39642000996836,54.8395954275034,109.451402377989,0,1.01362607645082,1.1298205288131,0.51968329191118,0.358053391334963,0.993406773906324,0.600977247599844,0.590758108698309,0.504832249740738,0.228620419965,0.403304740547362,0.487289403698762,0.0962118416403295,0.584384510907845,1.58711268530648,1.33191572024439,1.61484941897056,3.02192309455341,1.9318959403219,5.81815673898664,4.2124873581471,2.35805216986972,0,294.800461846109,270.210913829713,270.406682343395,196.600040601179,251.425284755826,284.028105418527,229.507650078814,270.643043137756,261.463169983886,277.519527098975,20.549894821667,28.3307660114732,19.8050982674796,14.1001895899611,22.8478347264501,20.7743164548516,18.2242316797324,19.3672953804561,23.4271023002025,18.9522908822848,19.010947491768,18.4853814558355,16.761829837109,16.4544641680514,16.483979590261,12.3836359733599,15.8761526544452,14.2752823143142,21.0163809409686,16.7806768953213,17.4863318716562,15.4403951358624,15.4983523465759,17.8776092457764,15.6221571489449,15.7383170678518,17.3781574229134,17.8887403777733,15.8890813199658,23.0068331379673,14.3548371930251,13.5936185678278,14.3230865109391,14.2541893891089,14.8538090455479,52.9598425228445,16.609144199624,19.5532659183951,15.876931561714,11.6913452133343,13.216466630364 | |||
|short_description=p1@Phyhipl | |||
}} |
Latest revision as of 06:18, 26 September 2015
Short description: | p1@Phyhipl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Phyhipl_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000046513, ENSMUST00000163054, NM_178621, uc007fnz.2, uc007foa.2, uc007fob.2_5end |
EntrezGene: | Phyhipl |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.62e-15 | 44 |
neurectodermal cell | 1.62e-15 | 44 |
neural cell | 1.99e-15 | 43 |
CNS neuron (sensu Vertebrata) | 1.04e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.04e-13 | 23 |
neuron | 3.11e-13 | 33 |
neuronal stem cell | 3.11e-13 | 33 |
neuroblast | 3.11e-13 | 33 |
electrically signaling cell | 3.11e-13 | 33 |
electrically responsive cell | 6.16e-09 | 39 |
electrically active cell | 6.16e-09 | 39 |