FFCP PHASE1:Mm9::chr10:6979950..6980034,-: Difference between revisions
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{{FFCP|EntrezGene=76142|HGNC=|MCL_coexpression_id=1519|UniProt=Q8R4S0|association_with_transcript=356bp_to_ENSMUST00000043374,NM_133485,uc007ehq.1,uc007ehr.1_5end|description=CAGE_peak_1_at_Ppp1r14c_5end|id=chr10:6979950..6980034,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000221,9.99e-07,44;CL:0000133,9.99e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!1.63e-09!18;UBERON:0000948!1.63e-09!18;UBERON:0005498!1.63e-09!18;UBERON:0004140!1.63e-09!18;UBERON:0009881!1.63e-09!18;UBERON:0004141!1.63e-09!18;UBERON:0003084!1.63e-09!18;UBERON:0007005!1.63e-09!18;UBERON:0004139!1.63e-09!18;UBERON:0004291!1.63e-09!18;UBERON:0004121!2.82e-08!102;UBERON:0000924!2.82e-08!102;UBERON:0006601!2.82e-08!102;UBERON:0000073!4.17e-08!75;UBERON:0001016!4.17e-08!75;UBERON:0002048!6.60e-08!14;UBERON:0000117!6.60e-08!14;UBERON:0000171!6.60e-08!14;UBERON:0000170!6.60e-08!14;UBERON:0005597!6.60e-08!14;UBERON:0000118!6.60e-08!14;UBERON:0001017!2.45e-07!73;UBERON:0005743!2.45e-07!73;UBERON:0000025!3.19e-07!114;UBERON:0004111!3.23e-07!122;UBERON:0002020!8.82e-07!34;UBERON:0000468!8.86e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.26e-11,92;UBERON:0007100,9.29e-10,18;UBERON:0000948,9.29e-10,18;UBERON:0005498,9.29e-10,18;UBERON:0004140,9.29e-10,18;UBERON:0009881,9.29e-10,18;UBERON:0004141,9.29e-10,18;UBERON:0003084,9.29e-10,18;UBERON:0007005,9.29e-10,18;UBERON:0004139,9.29e-10,18;UBERON:0004291,9.29e-10,18;UBERON:0001016,4.03e-08,75;UBERON:0004121,4.15e-08,95;UBERON:0000924,4.15e-08,95;UBERON:0006601,4.15e-08,95;UBERON:0002048,4.21e-08,14;UBERON:0000117,4.21e-08,14;UBERON:0000171,4.21e-08,14;UBERON:0000170,4.21e-08,14;UBERON:0005597,4.21e-08,14;UBERON:0000118,4.21e-08,14;UBERON:0000025,2.24e-07,114;UBERON:0001017,2.45e-07,73;UBERON:0004111,4.47e-07,122;UBERON:0002020,6.08e-07,34|phase1_expression=11.3705681444404,18.1467211972468,29.1199513209303,0,0,21.6564260766338,19.3898491694286,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,14.9676190665883,0,0,20.7990149631429,17.8939239232393,30.4342940980961,27.9995297503399,32.967098600941,0.190023419456374,0,17.5167103417691,0,0,0,1.73310971850765,1.66234645358492,1.22501613757421,0,0,0,0,0,0,0,0,0,0,10.4652075062614,7.46933021297204,3.69416808241138,2.79972843250725,11.5002051491977,0,0,0,1.02903774414379,2.0057340795713,14.4388185837684,14.7691016427506,11.1088105647127,21.5502677192101,0.338844532069132,0,0,0,0,9.88680364710736,17.6740420447915,9.53944433237994,13.2305819565057,8.83364837675805,40.5624397853401,37.7685205027259,21.0684174649721,16.5812664861549,13.7882817991503,8.8092704799511,12.896421146604,14.2854075928306,15.2988093767025,16.0103376304217,11.4600941522487,15.355064945076,9.56696437053856,13.5990440521361,32.4091444021034,33.172601626191,20.8767379324337,46.0415255465759,47.912369107702,0.289864488701678,0,0,0,0,0,21.0666630197628,0,0,0,35.3516983639468,0,0,0,2.16491041011214,0.506719730950197,0,6.05174562511018,0.517875767294343,1.33597925158342,4.51061849591953,5.48037860961854,7.84092690670599,7.83757730873637,5.52666923537813,13.8233250462643,0,2.60278842455841,11.4999371753484,45.456484835222,42.1807300259352,28.6076399349781,5.59175283654366,7.61230072230023,12.3573557019938,2.29911349687732,0,0,0,13.481157546434,8.23501085073528,26.6387226479273,11.298580812498,17.3886510984625,12.8828587626927,15.0884374653015,0.712875546952214,10.2013715900276,0,2.52530227063769,0.910843100738926,1.60931473103431,2.34080768746954,5.57607825992146,7.55205140579739,8.96796041993949,9.46387418053261,7.24369438069244,0.862271971731369,1.13463648100692,1.58356011747554,3.94552318369635,5.00485048606076,16.3678518265418,17.2856994582672,1.59227413454795,0,0,0,57.1667132197985,54.1755198556332,78.3269967355415,75.9950601228525,105.465628216608,104.593102537642,120.220049435961,131.185693284414,110.343248536975,151.724181620229,165.973306183965,222.047469346099,230.118780207473,140.07297355569,129.777606941279,19.9775451135921,32.4149528994746,2.31293148088659,0.793351699990633,0.853153002140936,0,1.67527699718721,1.21010114774006,1.33426826306922,1.33157938278791,0.474529061544512,0.988193728344065,1.50801125280162,2.58643413653496,2.53453313254856,1.79763881730844,1.08069024937347,1.59313018603494,1.70701110857774,1.71372768914593,2.25415471346161,3.25842124552503,2.52138233317913,1.8936671370386,0.379419222745544,0.442830443938806,0.470996183524124,0.123397163921801,0,1.83529616287703,0,0.224862112384854,0,0,4.58326533206556,3.16465751195892,0.324270453550071,0.549122826376163,1.43768206527355,2.60498663367952,0.624075346229121,0.252578877947112,0.538192240565737,0,74.8250420174749,9.28507917675375,15.6446377384345,21.3878808076737,52.805305864913,96.6511105439277,119.497907724779,116.885055066821,76.4530448915026,68.875518480769,77.8139271048537,82.9148372461634,105.337838938196,108.052846760389,0,0,1.47529281905711,0,9.9541365792431,12.5416504653657,0,152.99738188585,7.88770548540642,9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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76142 | |||
|HGNC= | |||
|MCL_coexpression_id=1519 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R4S0 | |||
|association_with_transcript=356bp_to_ENSMUST00000043374,NM_133485,uc007ehq.1,uc007ehr.1_5end | |||
|cluster_id=chr10:6979950..6980034,- | |||
|description=CAGE_peak_1_at_Ppp1r14c_5end | |||
|id=chr10:6979950..6980034,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,9.99e-07,44;CL:0000133,9.99e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.63e-09!18;UBERON:0000948!1.63e-09!18;UBERON:0005498!1.63e-09!18;UBERON:0004140!1.63e-09!18;UBERON:0009881!1.63e-09!18;UBERON:0004141!1.63e-09!18;UBERON:0003084!1.63e-09!18;UBERON:0007005!1.63e-09!18;UBERON:0004139!1.63e-09!18;UBERON:0004291!1.63e-09!18;UBERON:0004121!2.82e-08!102;UBERON:0000924!2.82e-08!102;UBERON:0006601!2.82e-08!102;UBERON:0000073!4.17e-08!75;UBERON:0001016!4.17e-08!75;UBERON:0002048!6.60e-08!14;UBERON:0000117!6.60e-08!14;UBERON:0000171!6.60e-08!14;UBERON:0000170!6.60e-08!14;UBERON:0005597!6.60e-08!14;UBERON:0000118!6.60e-08!14;UBERON:0001017!2.45e-07!73;UBERON:0005743!2.45e-07!73;UBERON:0000025!3.19e-07!114;UBERON:0004111!3.23e-07!122;UBERON:0002020!8.82e-07!34;UBERON:0000468!8.86e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.26e-11,92;UBERON:0007100,9.29e-10,18;UBERON:0000948,9.29e-10,18;UBERON:0005498,9.29e-10,18;UBERON:0004140,9.29e-10,18;UBERON:0009881,9.29e-10,18;UBERON:0004141,9.29e-10,18;UBERON:0003084,9.29e-10,18;UBERON:0007005,9.29e-10,18;UBERON:0004139,9.29e-10,18;UBERON:0004291,9.29e-10,18;UBERON:0001016,4.03e-08,75;UBERON:0004121,4.15e-08,95;UBERON:0000924,4.15e-08,95;UBERON:0006601,4.15e-08,95;UBERON:0002048,4.21e-08,14;UBERON:0000117,4.21e-08,14;UBERON:0000171,4.21e-08,14;UBERON:0000170,4.21e-08,14;UBERON:0005597,4.21e-08,14;UBERON:0000118,4.21e-08,14;UBERON:0000025,2.24e-07,114;UBERON:0001017,2.45e-07,73;UBERON:0004111,4.47e-07,122;UBERON:0002020,6.08e-07,34 | |||
|phase1_expression=11.3705681444404,18.1467211972468,29.1199513209303,0,0,21.6564260766338,19.3898491694286,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,14.9676190665883,0,0,20.7990149631429,17.8939239232393,30.4342940980961,27.9995297503399,32.967098600941,0.190023419456374,0,17.5167103417691,0,0,0,1.73310971850765,1.66234645358492,1.22501613757421,0,0,0,0,0,0,0,0,0,0,10.4652075062614,7.46933021297204,3.69416808241138,2.79972843250725,11.5002051491977,0,0,0,1.02903774414379,2.0057340795713,14.4388185837684,14.7691016427506,11.1088105647127,21.5502677192101,0.338844532069132,0,0,0,0,9.88680364710736,17.6740420447915,9.53944433237994,13.2305819565057,8.83364837675805,40.5624397853401,37.7685205027259,21.0684174649721,16.5812664861549,13.7882817991503,8.8092704799511,12.896421146604,14.2854075928306,15.2988093767025,16.0103376304217,11.4600941522487,15.355064945076,9.56696437053856,13.5990440521361,32.4091444021034,33.172601626191,20.8767379324337,46.0415255465759,47.912369107702,0.289864488701678,0,0,0,0,0,21.0666630197628,0,0,0,35.3516983639468,0,0,0,2.16491041011214,0.506719730950197,0,6.05174562511018,0.517875767294343,1.33597925158342,4.51061849591953,5.48037860961854,7.84092690670599,7.83757730873637,5.52666923537813,13.8233250462643,0,2.60278842455841,11.4999371753484,45.456484835222,42.1807300259352,28.6076399349781,5.59175283654366,7.61230072230023,12.3573557019938,2.29911349687732,0,0,0,13.481157546434,8.23501085073528,26.6387226479273,11.298580812498,17.3886510984625,12.8828587626927,15.0884374653015,0.712875546952214,10.2013715900276,0,2.52530227063769,0.910843100738926,1.60931473103431,2.34080768746954,5.57607825992146,7.55205140579739,8.96796041993949,9.46387418053261,7.24369438069244,0.862271971731369,1.13463648100692,1.58356011747554,3.94552318369635,5.00485048606076,16.3678518265418,17.2856994582672,1.59227413454795,0,0,0,57.1667132197985,54.1755198556332,78.3269967355415,75.9950601228525,105.465628216608,104.593102537642,120.220049435961,131.185693284414,110.343248536975,151.724181620229,165.973306183965,222.047469346099,230.118780207473,140.07297355569,129.777606941279,19.9775451135921,32.4149528994746,2.31293148088659,0.793351699990633,0.853153002140936,0,1.67527699718721,1.21010114774006,1.33426826306922,1.33157938278791,0.474529061544512,0.988193728344065,1.50801125280162,2.58643413653496,2.53453313254856,1.79763881730844,1.08069024937347,1.59313018603494,1.70701110857774,1.71372768914593,2.25415471346161,3.25842124552503,2.52138233317913,1.8936671370386,0.379419222745544,0.442830443938806,0.470996183524124,0.123397163921801,0,1.83529616287703,0,0.224862112384854,0,0,4.58326533206556,3.16465751195892,0.324270453550071,0.549122826376163,1.43768206527355,2.60498663367952,0.624075346229121,0.252578877947112,0.538192240565737,0,74.8250420174749,9.28507917675375,15.6446377384345,21.3878808076737,52.805305864913,96.6511105439277,119.497907724779,116.885055066821,76.4530448915026,68.875518480769,77.8139271048537,82.9148372461634,105.337838938196,108.052846760389,0,0,1.47529281905711,0,9.9541365792431,12.5416504653657,0,152.99738188585,7.88770548540642,9.37052986311932,20.8960695800815,15.5329718669159,13.8135177931084,16.9845918473299,12.1443210502468,17.82760733259,21.7408277870588,17.6726724031994,4.11626247103979,6.05423052468668,2.11753047159649,6.76377504187395,0,1.45668381692989,0.906970670894253,1.69744571780308,0.590603785761546,1.84461088766356,0,1.09060118843252,4.63446591900138,1.26414703174326,1.05418608574999,0,1.02131881726136,0.18006109403131,0.129358683782755,1.92903331528433,0.709360934569094,1.96205699362278,4.60737257685939,2.13125464380219,0,0.63549621259146,0.661585194164886,42.2108807530189,23.2508774442104,29.1311427402993,25.5456816166712,23.1438668640536,1.45740418314925,11.3109434226411,0,1.44470807574256,0.185194527369712,0,0,0,0.169978429993855,0.139951452323658,0,0,0.474503990371703,2.03319467126849,1.72808545314882,0.627264888043406,0.436725127492355,2.15782954215713,2.97552440611209,2.6175594198403,0.518459893167171,0.621339313086926,0,2.24274819065968,2.48187735685646,1.94451188344048,1.80823752868824,2.36538575687089,1.29092962510329,1.17183946359555,0.209718688851422,0,21.314220463082,0,1.21635129174099,0.718976700153791,1.03936658382236,0.716106782669926,1.78813219303138,1.32214994471966,0.738447635872886,1.41353029927407,0.762068066549998,0.604957110821043,0.194915761479505,0.577271049841977,0.701261413089414,9.52267611183888,0.665957860122194,0.269141569828427,0,0.386379188064381,1.12609485270709,0.36630324853453,36.4426244434412,1.00314420807073,39.5326289831947,30.3814656094737,37.2382083735608,25.6061241692095,15.0718154349541,12.8416962556249,16.8755625057951,11.2580300806055,9.06284817968409,16.0505696643064,2.49089634202024,2.39414924040619,3.58540572083682,10.6966955510049,8.17491334249131,24.8188736407519,28.6698278864084,28.2268028417285,25.3526175577534,27.5439960822539,20.0248646913289,27.9166985251393,29.497074853013,30.4119473923129,29.062347291540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| |||
|short_description=p1@Ppp1r14c | |||
}} |
Latest revision as of 06:14, 26 September 2015
Short description: | p1@Ppp1r14c |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ppp1r14c_5end |
Coexpression cluster: | MCL_coexpression_mm9:1519 |
Association with transcript: | 356bp_to_ENSMUST00000043374, NM_133485, uc007ehq.1, uc007ehr.1_5end |
EntrezGene: | Ppp1r14c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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ectodermal cell | 9.99e-07 | 44 |
neurectodermal cell | 9.99e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.26e-11 | 92 |
primary circulatory organ | 9.29e-10 | 18 |
heart | 9.29e-10 | 18 |
primitive heart tube | 9.29e-10 | 18 |
primary heart field | 9.29e-10 | 18 |
anterior lateral plate mesoderm | 9.29e-10 | 18 |
heart tube | 9.29e-10 | 18 |
heart primordium | 9.29e-10 | 18 |
cardiac mesoderm | 9.29e-10 | 18 |
cardiogenic plate | 9.29e-10 | 18 |
heart rudiment | 9.29e-10 | 18 |
nervous system | 4.03e-08 | 75 |
ectoderm-derived structure | 4.15e-08 | 95 |
ectoderm | 4.15e-08 | 95 |
presumptive ectoderm | 4.15e-08 | 95 |
lung | 4.21e-08 | 14 |
respiratory tube | 4.21e-08 | 14 |
respiration organ | 4.21e-08 | 14 |
pair of lungs | 4.21e-08 | 14 |
lung primordium | 4.21e-08 | 14 |
lung bud | 4.21e-08 | 14 |
tube | 2.24e-07 | 114 |
central nervous system | 2.45e-07 | 73 |
anatomical conduit | 4.47e-07 | 122 |
gray matter | 6.08e-07 | 34 |