FFCP PHASE1:Hg19::chr2:219745284..219745293,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80326 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13829 | |||
|TSSclassifier=strong | |||
|UniProt=Q53S44,Q9GZT5 | |||
|association_with_transcript=29bp_to_NM_025216,uc002vjd.1_5end | |||
|cluster_id=chr2:219745284..219745293,+ | |||
|coexpression_cluster_id=C2688 | |||
|description=CAGE_peak_5_at_WNT10A_5end | |||
|id=chr2:219745284..219745293,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.10e-26!53;CL:0000051!1.10e-26!53;CL:0000838!2.96e-25!52;CL:0000945!7.13e-16!24;CL:0000826!7.13e-16!24;CL:0000624!2.75e-12!6;CL:0002087!1.00e-11!119;CL:0000738!3.15e-10!140;CL:0000791!2.02e-09!18;CL:0000789!2.02e-09!18;CL:0002420!2.02e-09!18;CL:0002419!2.02e-09!18;CL:0000790!2.02e-09!18;CL:0000084!3.81e-09!25;CL:0000827!3.81e-09!25;CL:0002031!1.66e-08!124;CL:0000784!9.00e-08!3;CL:0000898!8.92e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000784;4.34e-22;3!CL:0000945;2.85e-17;24!CL:0000123;1.36e-14;2!CL:0000242;1.36e-14;2!CL:0000542;7.24e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,4.68e-22,3;CL:0000945,2.80e-17,24;CL:0000826,2.80e-17,24;CL:0000242,6.82e-15,2;CL:0000838,5.99e-14,52;CL:0000542,1.19e-13,53;CL:0000051,1.19e-13,53;CL:0000738,3.47e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000051;7.24e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;1.13e-08;1!DOID:3149;1.13e-08;1!DOID:630;3.82e-08;1!DOID:0050177;3.82e-08;1!DOID:0050427;3.82e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.13e-08,1;DOID:3149,1.13e-08,1;DOID:630,3.57e-08,1;DOID:0050177,3.57e-08,1;DOID:0050427,3.57e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;3.82e-08;1!UBERON:0004913;3.82e-08;1!UBERON:0005056;3.82e-08;1!UBERON:0003703;3.82e-08;1!UBERON:0004176;3.82e-08;1!UBERON:0001174;3.82e-08;1!UBERON:0004914;3.82e-08;1!UBERON:0003343;5.44e-08;4!UBERON:0004785;5.44e-08;4!UBERON:0002394;9.77e-08;4!UBERON:0003928;9.77e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,2.89e-08,1;UBERON:0003703,2.89e-08,1;UBERON:0001174,2.89e-08,1;UBERON:0004914,2.89e-08,1;UBERON:0000997,3.10e-08,1;UBERON:0005056,3.10e-08,1;UBERON:0003343,7.18e-08,4;UBERON:0004785,7.18e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20936304141395,1.9704141467987,1.73163718890094,0,0,0,0,0,0,0,1.13735385989937,0,0,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0.400395987036012,0.574752439954483,0,0,1.1384259382189,1.17447437874188,0,0,0,0,0.786839080455332,0.786021525498329,1.23360899399706,0,0.651844533267181,0,0,0,0.883817722424512,0.443067789167242,0,0,0,0,0,0,0.444859689486181,0,0,0,0.383220493601921,0,0.506039384039006,0,0,0,0,0.255973222308837,0,0,0,1.20964045934839,0.267440195783507,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14641561874808,2.28797964312051,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646882724578552,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0.735120647943095,0.929015875628594,0,1.13826949357463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557216921387392,0,1.19372242368845,0,0,0,0,0,0,0,0,0.276283915531148,0,0,2.46169610922139,0,1.25815691606258,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0,1.67308493134324,0.0769502585037971,0,0,0,0.434589487688032,0,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,1.46988596121566,0.0870592065804026,0,0,0.19351266257817,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0.391102765469606,0.320635281006135,0,0.599428828746391,0.288180834308212,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,3.35434687599266,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,3.557009374163,0.121792598380896,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87333962322753,1.44921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57785949122191,0.643324774124777,0.260994291965212,0.453411851024545,0,0.244736704506468,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11728983594649,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,3.4851433719119,1.03973099535304,0,0,0,0,0,0,0,0,1.47856086217045,0,0,0,0,0,0,0,0,2.29972369751271,0,0,0,0,0.177404740325278,0.576169937778896,0,0,0,0,0,0.078493092850514,0,3.08299379645168,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,1.60374807980835,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0.237840181555137,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.128915775947154,0.999411559249289,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0.217716747896961,0,0.202056159043763,0.143444410785353,0,0.325613074443898,0,0,0,0,0,0,0,0,1.28227396921293 | |||
|short_description=p5@WNT10A | |||
}} |
Latest revision as of 18:49, 24 September 2015
Short description: | p5@WNT10A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_WNT10A_5end |
Coexpression cluster: | C2688_keratoacanthoma_oral_b_B_merkel_lymphangiectasia_pharyngeal |
Association with transcript: | 29bp_to_NM_025216, uc002vjd.1_5end |
EntrezGene: | WNT10A |
HGNC: | 13829 |
UniProt: | Q53S44Q9GZT5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 4.68e-22 | 3 |
lymphocyte of B lineage | 2.80e-17 | 24 |
pro-B cell | 2.80e-17 | 24 |
Merkel cell | 6.82e-15 | 2 |
lymphoid lineage restricted progenitor cell | 5.99e-14 | 52 |
lymphocyte | 1.19e-13 | 53 |
common lymphoid progenitor | 1.19e-13 | 53 |
leukocyte | 3.47e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 2.89e-08 | 1 |
extrahepatic bile duct | 2.89e-08 | 1 |
common bile duct | 2.89e-08 | 1 |
duodenal papilla | 2.89e-08 | 1 |
mammalian vulva | 3.10e-08 | 1 |
external female genitalia | 3.10e-08 | 1 |
mucosa of oral region | 7.18e-08 | 4 |
respiratory system mucosa | 7.18e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.13e-08 | 1 |
keratoacanthoma | 1.13e-08 | 1 |
genetic disease | 3.57e-08 | 1 |
monogenic disease | 3.57e-08 | 1 |
xeroderma pigmentosum | 3.57e-08 | 1 |