FFCP PHASE1:Mm9::chr10:42398696..42398754,+: Difference between revisions
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{{FFCP|EntrezGene=14628|HGNC=|UniProt=Q8BGT0|association_with_transcript=0bp_to_ENSMUST00000040718,NM_172416,uc007eyu.1,uc007eyv.1_5end|description=CAGE_peak_1_at_Ostm1_5end|id=chr10:42398696..42398754,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000480!1.08e-11!308;UBERON:0000467!1.08e-11!308;UBERON:0007811!1.15e-11!86;UBERON:0000475!1.84e-11!200;UBERON:0004121!4.65e-11!102;UBERON:0000924!4.65e-11!102;UBERON:0006601!4.65e-11!102;UBERON:0000073!2.09e-10!75;UBERON:0001016!2.09e-10!75;UBERON:0001017!1.64e-09!73;UBERON:0005743!1.64e-09!73;UBERON:0000477!2.00e-09!154;UBERON:0002020!3.65e-09!34;UBERON:0000955!6.34e-09!50;UBERON:0006238!6.34e-09!50;UBERON:0000033!9.35e-09!63;UBERON:0001049!1.35e-08!52;UBERON:0005068!1.35e-08!52;UBERON:0006241!1.35e-08!52;UBERON:0007135!1.35e-08!52;UBERON:0002616!1.82e-08!49;UBERON:0002791!1.96e-08!29;UBERON:0003528!1.96e-08!29;UBERON:0001893!1.96e-08!29;UBERON:0000153!2.38e-08!94;UBERON:0002346!2.45e-08!71;UBERON:0003075!2.45e-08!71;UBERON:0007284!2.45e-08!71;UBERON:0000923!2.95e-08!314;UBERON:0005291!2.95e-08!314;UBERON:0006598!2.95e-08!314;UBERON:0002532!2.95e-08!314;UBERON:0002050!5.76e-08!317;UBERON:0005423!5.76e-08!317;UBERON:0000483!5.76e-08!181;UBERON:0000119!1.46e-07!183;UBERON:0007023!1.87e-07!51;UBERON:0000064!2.50e-07!99;UBERON:0004111!2.77e-07!122;UBERON:0002021!5.97e-07!10;UBERON:0000411!5.97e-07!10;UBERON:0001950!5.97e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.07e-10,95;UBERON:0000924,1.07e-10,95;UBERON:0006601,1.07e-10,95;UBERON:0001016,2.09e-10,75;UBERON:0001017,1.64e-09,73;UBERON:0000073,2.68e-09,54;UBERON:0002020,3.65e-09,34;UBERON:0010314,5.00e-09,92;UBERON:0001049,1.35e-08,52;UBERON:0005068,1.35e-08,52;UBERON:0006241,1.35e-08,52;UBERON:0007135,1.35e-08,52;UBERON:0003528,1.96e-08,29;UBERON:0002791,1.96e-08,29;UBERON:0001893,1.96e-08,29;UBERON:0002346,4.23e-08,64;UBERON:0003075,4.23e-08,64;UBERON:0007284,4.23e-08,64;UBERON:0010371,5.12e-08,73;UBERON:0000955,9.31e-08,47;UBERON:0006238,9.31e-08,47;UBERON:0007023,1.87e-07,51;UBERON:0000483,1.94e-07,174;UBERON:0002616,2.55e-07,46;UBERON:0004111,2.77e-07,122;UBERON:0000119,4.79e-07,176;UBERON:0002021,5.97e-07,10;UBERON:0000411,5.97e-07,10;UBERON:0001950,5.97e-07,10|phase1_expression=12.3314612270691,12.9120900826564,10.4649825059593,12.0985684522732,12.5223932486587,6.71517087647559,7.47560449905682,23.1130748960421,2.39340827657833,2.34064526321993,7.53359060192222,7.97721589953364,22.427295620988,24.2154514700623,14.6568295198892,12.5534665781692,12.5921138063066,20.0318475002481,22.7609959785526,19.5219239827094,17.008658030214,15.1915155337354,12.27639008953,5.75972722056264,8.94696196161963,5.7423196411502,5.59990595006797,8.18790684206378,8.36103045608045,11.089325709437,5.54326276638262,6.35030673459631,5.53558308826113,15.8481681015439,4.33277429626912,4.48833542467929,3.67504841272264,37.6678467663217,25.0027310247616,27.7467584306113,20.5881020810855,29.3709558532132,31.0726625939938,92.911851665976,89.0089456107338,72.1338735995408,13.3006528539167,14.8257106338704,24.3851662835264,32.275363246331,20.4380175573029,8.62515386189829,15.6037823633695,17.4086914082723,19.4934403502629,21.8670520630555,34.9570796725283,31.9716697212014,13.7575193384526,20.1016572123373,7.60597684207415,10.165335962074,8.00365316500025,18.4479442042687,22.7439263390404,13.4991221839759,10.1864037576258,11.1423308543251,15.3460626216547,14.4456354014909,10.9368979902719,18.852964970651,22.5285911770646,14.2089327089347,9.10531974673246,11.0306254393203,35.2370819198044,32.4325838736377,35.6367157154485,16.6176722540044,15.3699241252048,20.8365348222704,37.4105218661851,36.5795696520592,37.2827724575417,21.2132581541041,19.6472919502762,20.3175395949578,34.9097751265979,53.0512351949634,21.1601076752225,18.9293252935905,6.79971333707751,8.63525106620507,15.5946340187441,12.5447528387254,19.9431076587088,23.3489541931939,21.822024386641,21.5537140451308,19.9997656082886,32.0816193535795,43.3168907501298,21.3320010945999,13.8554266247177,15.454951793981,11.1215377903252,16.0999270403875,26.1527262483643,25.5320479191499,7.98032503124225,14.9188084372949,17.9880087859726,18.38816214742,15.2865319276416,25.2589848572648,16.5620628382031,16.6289260457898,24.7690954545965,12.2942805960031,19.8757366614354,14.5462575940567,20.5030937339934,33.3770108593164,26.5997317653088,14.8165092020983,9.34557971146178,9.59844369589452,8.89491589511453,37.4476598512057,43.0050566649509,24.12563560567,40.3272422846081,49.3530832647538,39.0641523771973,34.5573890334324,8.55450656342657,19.2830804445644,35.1284634222808,23.5694878592851,7.28674480591141,8.5063778640385,11.5239763075424,12.6592046982001,22.1798987233329,16.7828973573153,18.7403449119458,27.6812606690747,1.72454394346274,3.40390944302075,5.98233822157426,5.47989331068937,6.95118123063995,5.92028683087683,9.26019613835746,5.17489093728082,9.830984622385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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14628 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q8BGT0 | |||
|association_with_transcript=0bp_to_ENSMUST00000040718,NM_172416,uc007eyu.1,uc007eyv.1_5end | |||
|cluster_id=chr10:42398696..42398754,+ | |||
|description=CAGE_peak_1_at_Ostm1_5end | |||
|id=chr10:42398696..42398754,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000480!1.08e-11!308;UBERON:0000467!1.08e-11!308;UBERON:0007811!1.15e-11!86;UBERON:0000475!1.84e-11!200;UBERON:0004121!4.65e-11!102;UBERON:0000924!4.65e-11!102;UBERON:0006601!4.65e-11!102;UBERON:0000073!2.09e-10!75;UBERON:0001016!2.09e-10!75;UBERON:0001017!1.64e-09!73;UBERON:0005743!1.64e-09!73;UBERON:0000477!2.00e-09!154;UBERON:0002020!3.65e-09!34;UBERON:0000955!6.34e-09!50;UBERON:0006238!6.34e-09!50;UBERON:0000033!9.35e-09!63;UBERON:0001049!1.35e-08!52;UBERON:0005068!1.35e-08!52;UBERON:0006241!1.35e-08!52;UBERON:0007135!1.35e-08!52;UBERON:0002616!1.82e-08!49;UBERON:0002791!1.96e-08!29;UBERON:0003528!1.96e-08!29;UBERON:0001893!1.96e-08!29;UBERON:0000153!2.38e-08!94;UBERON:0002346!2.45e-08!71;UBERON:0003075!2.45e-08!71;UBERON:0007284!2.45e-08!71;UBERON:0000923!2.95e-08!314;UBERON:0005291!2.95e-08!314;UBERON:0006598!2.95e-08!314;UBERON:0002532!2.95e-08!314;UBERON:0002050!5.76e-08!317;UBERON:0005423!5.76e-08!317;UBERON:0000483!5.76e-08!181;UBERON:0000119!1.46e-07!183;UBERON:0007023!1.87e-07!51;UBERON:0000064!2.50e-07!99;UBERON:0004111!2.77e-07!122;UBERON:0002021!5.97e-07!10;UBERON:0000411!5.97e-07!10;UBERON:0001950!5.97e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.07e-10,95;UBERON:0000924,1.07e-10,95;UBERON:0006601,1.07e-10,95;UBERON:0001016,2.09e-10,75;UBERON:0001017,1.64e-09,73;UBERON:0000073,2.68e-09,54;UBERON:0002020,3.65e-09,34;UBERON:0010314,5.00e-09,92;UBERON:0001049,1.35e-08,52;UBERON:0005068,1.35e-08,52;UBERON:0006241,1.35e-08,52;UBERON:0007135,1.35e-08,52;UBERON:0003528,1.96e-08,29;UBERON:0002791,1.96e-08,29;UBERON:0001893,1.96e-08,29;UBERON:0002346,4.23e-08,64;UBERON:0003075,4.23e-08,64;UBERON:0007284,4.23e-08,64;UBERON:0010371,5.12e-08,73;UBERON:0000955,9.31e-08,47;UBERON:0006238,9.31e-08,47;UBERON:0007023,1.87e-07,51;UBERON:0000483,1.94e-07,174;UBERON:0002616,2.55e-07,46;UBERON:0004111,2.77e-07,122;UBERON:0000119,4.79e-07,176;UBERON:0002021,5.97e-07,10;UBERON:0000411,5.97e-07,10;UBERON:0001950,5.97e-07,10 | |||
|phase1_expression=12.3314612270691,12.9120900826564,10.4649825059593,12.0985684522732,12.5223932486587,6.71517087647559,7.47560449905682,23.1130748960421,2.39340827657833,2.34064526321993,7.53359060192222,7.97721589953364,22.427295620988,24.2154514700623,14.6568295198892,12.5534665781692,12.5921138063066,20.0318475002481,22.7609959785526,19.5219239827094,17.008658030214,15.1915155337354,12.27639008953,5.75972722056264,8.94696196161963,5.7423196411502,5.59990595006797,8.18790684206378,8.36103045608045,11.089325709437,5.54326276638262,6.35030673459631,5.53558308826113,15.8481681015439,4.33277429626912,4.48833542467929,3.67504841272264,37.6678467663217,25.0027310247616,27.7467584306113,20.5881020810855,29.3709558532132,31.0726625939938,92.911851665976,89.0089456107338,72.1338735995408,13.3006528539167,14.8257106338704,24.3851662835264,32.275363246331,20.4380175573029,8.62515386189829,15.6037823633695,17.4086914082723,19.4934403502629,21.8670520630555,34.9570796725283,31.9716697212014,13.7575193384526,20.1016572123373,7.60597684207415,10.165335962074,8.00365316500025,18.4479442042687,22.7439263390404,13.4991221839759,10.1864037576258,11.1423308543251,15.3460626216547,14.4456354014909,10.9368979902719,18.852964970651,22.5285911770646,14.2089327089347,9.10531974673246,11.0306254393203,35.2370819198044,32.4325838736377,35.6367157154485,16.6176722540044,15.3699241252048,20.8365348222704,37.4105218661851,36.5795696520592,37.2827724575417,21.2132581541041,19.6472919502762,20.3175395949578,34.9097751265979,53.0512351949634,21.1601076752225,18.9293252935905,6.79971333707751,8.63525106620507,15.5946340187441,12.5447528387254,19.9431076587088,23.3489541931939,21.822024386641,21.5537140451308,19.9997656082886,32.0816193535795,43.3168907501298,21.3320010945999,13.8554266247177,15.454951793981,11.1215377903252,16.0999270403875,26.1527262483643,25.5320479191499,7.98032503124225,14.9188084372949,17.9880087859726,18.38816214742,15.2865319276416,25.2589848572648,16.5620628382031,16.6289260457898,24.7690954545965,12.2942805960031,19.8757366614354,14.5462575940567,20.5030937339934,33.3770108593164,26.5997317653088,14.8165092020983,9.34557971146178,9.59844369589452,8.89491589511453,37.4476598512057,43.0050566649509,24.12563560567,40.3272422846081,49.3530832647538,39.0641523771973,34.5573890334324,8.55450656342657,19.2830804445644,35.1284634222808,23.5694878592851,7.28674480591141,8.5063778640385,11.5239763075424,12.6592046982001,22.1798987233329,16.7828973573153,18.7403449119458,27.6812606690747,1.72454394346274,3.40390944302075,5.98233822157426,5.47989331068937,6.95118123063995,5.92028683087683,9.26019613835746,5.17489093728082,9.83098462238529,9.77922047035918,10.2298859782413,15.5344329401626,14.540615718828,10.2635375032778,11.8372367792605,11.4123254413494,11.1072321278912,12.7893669612724,10.9992094573844,14.5956677958962,15.1395061920402,19.8642631535705,21.8075097678352,19.2983983401439,19.5399602609035,24.1571553768669,46.263788684108,24.9029161957868,13.8775888853195,12.4291766331866,3.83918850963421,3.48355007790658,6.44337306610467,6.6555563125703,11.3412802360884,10.0819581839656,16.6085171540579,13.1759163779209,19.1014758688205,20.2935601481974,19.6913727990311,17.0775687644302,11.8875927431082,11.948476395262,4.93136542478012,5.82667414309617,10.1436962105772,9.16430975303914,11.6371492300575,15.9208311151023,20.4254014911351,18.3036583494707,18.6828486131236,14.5608653427725,13.6368208460088,8.5091003915208,10.0245087507734,7.64531182108503,8.72298521970563,8.92355491083942,6.87489799809833,9.20627639842594,11.5116011010275,11.5315793538994,15.814502718009,9.30352369171258,9.67316786655138,18.185679212192,13.0960111870996,13.9908621195376,26.7892125741577,4.35830247072115,5.0519142697028,4.58311731593008,6.57132695207806,5.86271901046355,10.9500074807566,16.1960927721973,19.8620281573801,17.4957104822532,24.7154891419105,22.6131374307718,25.9027472798843,23.8670946659494,39.2057338242108,35.3538694482161,12.7858710984949,15.452457793065,40.137647496948,38.9142799486115,9.3442918864705,17.1680230498974,12.9358369960665,14.8366722832723,18.7418356027535,19.5954414321093,21.1658740378274,23.7784285862619,19.02610297872,17.2430956167674,17.7879500075936,39.2012006034605,18.8780313326997,4.98583690268315,11.5649741141039,21.7760562323747,34.5137359683903,6.79785781233948,6.65111825322452,13.9567759019365,16.5369060013233,20.2907197642992,22.7416897988035,17.4496190149203,15.6858846489277,30.3395287618383,47.4383738587494,37.1287955693473,18.3837387107046,8.64293251350289,6.46793418913772,5.5727629108214,10.2857335512519,6.59964625127661,9.70839221552514,10.656273219011,29.0992917999001,34.5286275508027,39.4745832518382,17.6428290647384,13.8859406958479,16.7066802050992,14.6827983123858,17.7272171724666,14.5740418314925,40.6081411403016,17.0870880797853,5.77883230297023,9.07453184111587,12.6206866193143,15.5831419601969,15.0993594316305,4.9293744698218,6.9975726161829,6.49539876880792,14.3200592702267,4.11236791655476,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| |||
|short_description=p1@Ostm1 | |||
}} |
Latest revision as of 00:38, 26 September 2015
Short description: | p1@Ostm1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ostm1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000040718, NM_172416, uc007eyu.1, uc007eyv.1_5end |
EntrezGene: | Ostm1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.07e-10 | 95 |
ectoderm | 1.07e-10 | 95 |
presumptive ectoderm | 1.07e-10 | 95 |
nervous system | 2.09e-10 | 75 |
central nervous system | 1.64e-09 | 73 |
regional part of nervous system | 2.68e-09 | 54 |
gray matter | 3.65e-09 | 34 |
structure with developmental contribution from neural crest | 5.00e-09 | 92 |
neural tube | 1.35e-08 | 52 |
neural rod | 1.35e-08 | 52 |
future spinal cord | 1.35e-08 | 52 |
neural keel | 1.35e-08 | 52 |
brain grey matter | 1.96e-08 | 29 |
regional part of telencephalon | 1.96e-08 | 29 |
telencephalon | 1.96e-08 | 29 |
neurectoderm | 4.23e-08 | 64 |
neural plate | 4.23e-08 | 64 |
presumptive neural plate | 4.23e-08 | 64 |
ecto-epithelium | 5.12e-08 | 73 |
brain | 9.31e-08 | 47 |
future brain | 9.31e-08 | 47 |
adult organism | 1.87e-07 | 51 |
epithelium | 1.94e-07 | 174 |
regional part of brain | 2.55e-07 | 46 |
anatomical conduit | 2.77e-07 | 122 |
cell layer | 4.79e-07 | 176 |
occipital lobe | 5.97e-07 | 10 |
visual cortex | 5.97e-07 | 10 |
neocortex | 5.97e-07 | 10 |