FFCP PHASE1:Hg19::chr9:136578622..136578634,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:136578622..136578634,-
|short_description=p5@SARDH
|description=CAGE_peak_5_at_SARDH_5end
|association_with_transcript=-403bp_to_BC033217_5end
|EntrezGene...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1757 | |EntrezGene=1757 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10536 | |HGNC=10536 | ||
|TSSclassifier=strong | |||
|UniProt=Q05BT1 | |UniProt=Q05BT1 | ||
|association_with_transcript=-403bp_to_BC033217_5end | |||
|cluster_id=chr9:136578622..136578634,- | |||
|coexpression_cluster_id=C39 | |||
|description=CAGE_peak_5_at_SARDH_5end | |||
|id=chr9:136578622..136578634,- | |||
|ontology_enrichment_celltype=CL:0002322!4.73e-10!5;CL:0000181!1.42e-09!12;CL:0000417!1.42e-09!12;CL:0000668!1.42e-09!12;CL:0000414!1.42e-09!12;CL:0000412!1.42e-09!12;CL:0000182!1.42e-09!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.33e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.33e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.74e-50;2!UBERON:0004161;2.37e-10;11!UBERON:0009497;5.70e-09;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!4.52e-17!3;UBERON:0004054!4.52e-17!3;UBERON:0001301!1.61e-13!1;UBERON:0001000!2.32e-13!1;UBERON:0005352!2.32e-13!1;UBERON:0005904!4.78e-13!4;UBERON:0003135!2.51e-10!11;UBERON:0002107!2.66e-10!19;UBERON:0006925!2.66e-10!19;UBERON:0008836!2.66e-10!19;UBERON:0008835!6.35e-09!22;UBERON:0003894!6.35e-09!22;UBERON:0009854!1.52e-08!23;UBERON:0007499!7.12e-08!25;UBERON:0009497!7.12e-08!25;UBERON:0000015!7.12e-08!25;UBERON:0002423!7.12e-08!25;UBERON:0006235!7.12e-08!25;UBERON:0004161!7.12e-08!25;UBERON:0005057!1.41e-07!26;UBERON:0009856!1.41e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;9.37e-99;1!UBERON:0006947;4.27e-34;3!UBERON:0004054;4.27e-34;3!UBERON:0005904;5.56e-26;4!UBERON:0000058;2.73e-11;10!UBERON:0003135;2.16e-10;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,9.37e-99,1;UBERON:0006947,4.27e-34,3;UBERON:0004054,4.27e-34,3;UBERON:0005904,5.56e-26,4;UBERON:0005103,9.39e-14,8;UBERON:0000083,9.39e-14,8;UBERON:0009201,9.39e-14,8;UBERON:0006553,9.39e-14,8;UBERON:0003074,9.39e-14,8;UBERON:0003060,9.39e-14,8;UBERON:0000080,2.19e-12,9;UBERON:0002120,2.19e-12,9;UBERON:0004875,2.19e-12,9;UBERON:0005721,2.19e-12,9;UBERON:0005754,2.19e-12,9;UBERON:0007297,2.19e-12,9;UBERON:0003135,2.16e-10,11;UBERON:0004876,2.16e-10,11;UBERON:0003887,1.22e-09,12;UBERON:0005172,1.34e-08,54;UBERON:0005173,1.34e-08,54;UBERON:0002417,7.34e-08,60;UBERON:0000916,7.34e-08,60;UBERON:0006555,1.45e-07,16;UBERON:0004819,1.45e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.7628268809161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709048640765013,0.659326867049332,1.01105315781277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.7628268809161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709048640765013,0.659326867049332,1.01105315781277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@SARDH | |||
}} | }} |
Latest revision as of 07:43, 16 September 2015
Short description: | p5@SARDH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SARDH_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | -403bp_to_BC033217_5end |
EntrezGene: | SARDH |
HGNC: | 10536 |
UniProt: | Q05BT1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.33e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
epididymis | 9.37e-99 | 1 |
male genital duct | 4.27e-34 | 3 |
internal male genitalia | 4.27e-34 | 3 |
duct of male reproductive system | 5.56e-26 | 4 |
mesonephric epithelium | 9.39e-14 | 8 |
mesonephric tubule | 9.39e-14 | 8 |
nephric duct | 9.39e-14 | 8 |
renal duct | 9.39e-14 | 8 |
mesonephric duct | 9.39e-14 | 8 |
pronephric duct | 9.39e-14 | 8 |
mesonephros | 2.19e-12 | 9 |
pronephros | 2.19e-12 | 9 |
nephrogenic cord | 2.19e-12 | 9 |
pronephric mesoderm | 2.19e-12 | 9 |
rostral part of nephrogenic cord | 2.19e-12 | 9 |
presumptive pronephric mesoderm | 2.19e-12 | 9 |
male reproductive organ | 2.16e-10 | 11 |
urogenital ridge | 2.16e-10 | 11 |
intraembryonic coelom | 1.22e-09 | 12 |
abdomen element | 1.34e-08 | 54 |
abdominal segment element | 1.34e-08 | 54 |
abdominal segment of trunk | 7.34e-08 | 60 |
abdomen | 7.34e-08 | 60 |
excretory tube | 1.45e-07 | 16 |
kidney epithelium | 1.45e-07 | 16 |