FFCP PHASE1:Mm9::chr10:20444810..20444828,-: Difference between revisions
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{{FFCP|EntrezGene=29863|HGNC=|MCL_coexpression_id=1504|UniProt=|association_with_transcript=9bp_to_ENSMUST00000166147,ENSMUST00000170683_5end|description=CAGE_peak_3_at_Pde7b_5end|id=chr10:20444810..20444828,-|ontology_enrichment_celltype=CL:0000107!3.28e-07!9|ontology_enrichment_celltype_v019_2=CL:0000107,8.77e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.21e-10!102;UBERON:0000924!2.21e-10!102;UBERON:0006601!2.21e-10!102;UBERON:0000033!1.25e-08!63;UBERON:0001017!3.40e-08!73;UBERON:0005743!3.40e-08!73;UBERON:0000073!6.54e-08!75;UBERON:0001016!6.54e-08!75;UBERON:0000468!1.16e-07!333;UBERON:0002021!3.01e-07!10;UBERON:0000411!3.01e-07!10;UBERON:0001950!3.01e-07!10;UBERON:0002410!3.28e-07!9;UBERON:0002346!5.36e-07!71;UBERON:0003075!5.36e-07!71;UBERON:0007284!5.36e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.58e-11,95;UBERON:0000924,1.58e-11,95;UBERON:0006601,1.58e-11,95;UBERON:0010314,9.89e-10,92;UBERON:0010371,1.97e-09,73;UBERON:0002346,7.65e-09,64;UBERON:0003075,7.65e-09,64;UBERON:0007284,7.65e-09,64;UBERON:0001017,2.36e-08,73;UBERON:0001016,6.80e-08,75;UBERON:0002021,7.96e-08,10;UBERON:0000411,7.96e-08,10;UBERON:0001950,7.96e-08,10;UBERON:0002410,8.77e-08,9;UBERON:0004111,8.96e-07,122|phase1_expression=2.7225304007815,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0.666219523631325,0.202475267389826,0,0.157731082679119,0,1.27316895539409,1.9559956734746,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0.523523743973798,1.17646297606203,0.683045484958446,0,1.38486499773135,2.33166941804883,6.42413632565885,0,0.218025156380447,0,0.388859798148567,0,0,0.335565212115473,0,0,0.257259436035947,0,0,0.809265843438391,0.528990979272033,0.633831403506179,0,0.889294796111139,2.2497492932035,1.97773272513395,1.4209602298922,0.898800331555214,1.15265491596466,0.311068836925433,0.270011876663381,0.210324961351382,1.99955689082663,3.53389665522582,0.122490799214954,0.287536413054709,0,6.60695285996332,6.2566795661742,5.9906547969935,0.263772575460388,0.274462930807229,0,1.95428099300967,4.50210088025344,3.51435969886663,2.65165726926301,3.98640706237488,0.372798891650601,0.605809546665472,1.13357340160178,1.15945795480671,0,0,2.15881276655127,0.649776417447669,0,0.983110940922263,0,0,0,4.08445917352373,1.28326477414318,0,0,0,0,0,1.1418387971906,3.10725460376606,1.1875371125186,1.38788261412909,0.608930956624282,0.230615497256059,0.301445281105245,1.88141931417128,0.502666365318702,0.247194967734374,3.32578520915797,1.76922110389975,5.3383060482645,3.09178125844551,8.727754556434,7.45567044872489,1.46390398505774,3.14170060220183,0,0.11981512450592,0.599902730993408,0,6.14141621559773,10.980014467647,2.63874139437015,9.38651329038293,8.95004100656157,4.1557608911912,5.67844420737152,1.83310854930569,4.72746488318353,2.0217820674694,8.41767423545896,1.69156575851515,2.06911893990126,2.88099407688559,3.46621081022145,4.42237244483631,6.53379973452734,6.1843138209421,6.20888089773638,0.431135985865684,0.756424320671277,2.63926686245923,1.53437012699302,3.05851974148158,1.39300866608867,4.52720700097476,0.59710280045548,0,0,0.568326998791185,4.34964122324554,4.45599513964083,3.06105504483725,4.26140524053378,1.96764231747404,3.85667782218446,1.86027155800326,0.804820204198858,1.86824547787471,2.63295759861569,3.77585167381919,4.37771571547621,3.36259971078264,2.85415149878366,3.08674763148855,4.41608891984667,0.617427674275707,0,0.264450566663544,0.426576501070468,1.16118335930219,1.15980715189884,1.00841762311671,1.11189021922435,2.28270751335071,0,0.658795818896044,1.50801125280162,1.79060824837036,2.33956904542944,0.898819408654221,0.648414149624083,0.995706366271836,0.758671603812327,0.913988100877831,0,2.64746726198909,1.74557238450863,2.17421041659988,3.35153646758564,2.80459281161244,3.61097074035162,4.56569506510662,0,0.333690211432188,0.393117990226406,0,0.405720242777006,0.241177159752417,0.25462585178142,0.287696137450811,0.810676133875177,0.274561413188081,2.87536413054709,0.744281895337007,2.18426371180192,3.03094653536534,1.07638448113147,2.8946611281802,2.40179147216586,0.568474235311454,1.14075483509418,0.678980343100753,2.11221223459652,1.50755631697634,1.90434912708811,1.95133647857799,4.09851374676097,3.76489972402917,4.30527875375215,4.09658286789345,3.45369963731791,5.64131328467895,6.03165135757089,8.15858525728064,2.45882136509518,0.827810238914197,3.53211297973142,4.10240903072711,0,4.29200576247434,9.4652465824877,9.76096860741596,12.2791336707695,12.1874086955802,9.35754431146055,11.3230612315533,7.69140333182299,11.1057226006299,5.53402889125133,4.17717711348349,8.94222536812092,0.534196811001766,1.62886959353576,4.28922319728592,0,0.242780636154981,0,0.565815239267694,0.295301892880773,0.922305443831782,0.775284879504663,0.727067458955011,0.712994756769443,1.8962205476149,0,0,5.44703369206061,2.16073312837572,0.388076051348264,1.50035924522115,1.77340233642274,2.31879462882692,2.30368628842969,2.74018454203139,0.469343416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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=29863 | |||
|HGNC= | |||
|MCL_coexpression_id=1504 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=9bp_to_ENSMUST00000166147,ENSMUST00000170683_5end | |||
|cluster_id=chr10:20444810..20444828,- | |||
|description=CAGE_peak_3_at_Pde7b_5end | |||
|id=chr10:20444810..20444828,- | |||
|ontology_enrichment_celltype=CL:0000107!3.28e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,8.77e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.21e-10!102;UBERON:0000924!2.21e-10!102;UBERON:0006601!2.21e-10!102;UBERON:0000033!1.25e-08!63;UBERON:0001017!3.40e-08!73;UBERON:0005743!3.40e-08!73;UBERON:0000073!6.54e-08!75;UBERON:0001016!6.54e-08!75;UBERON:0000468!1.16e-07!333;UBERON:0002021!3.01e-07!10;UBERON:0000411!3.01e-07!10;UBERON:0001950!3.01e-07!10;UBERON:0002410!3.28e-07!9;UBERON:0002346!5.36e-07!71;UBERON:0003075!5.36e-07!71;UBERON:0007284!5.36e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.58e-11,95;UBERON:0000924,1.58e-11,95;UBERON:0006601,1.58e-11,95;UBERON:0010314,9.89e-10,92;UBERON:0010371,1.97e-09,73;UBERON:0002346,7.65e-09,64;UBERON:0003075,7.65e-09,64;UBERON:0007284,7.65e-09,64;UBERON:0001017,2.36e-08,73;UBERON:0001016,6.80e-08,75;UBERON:0002021,7.96e-08,10;UBERON:0000411,7.96e-08,10;UBERON:0001950,7.96e-08,10;UBERON:0002410,8.77e-08,9;UBERON:0004111,8.96e-07,122 | |||
|phase1_expression=2.7225304007815,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0.666219523631325,0.202475267389826,0,0.157731082679119,0,1.27316895539409,1.9559956734746,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0.523523743973798,1.17646297606203,0.683045484958446,0,1.38486499773135,2.33166941804883,6.42413632565885,0,0.218025156380447,0,0.388859798148567,0,0,0.335565212115473,0,0,0.257259436035947,0,0,0.809265843438391,0.528990979272033,0.633831403506179,0,0.889294796111139,2.2497492932035,1.97773272513395,1.4209602298922,0.898800331555214,1.15265491596466,0.311068836925433,0.270011876663381,0.210324961351382,1.99955689082663,3.53389665522582,0.122490799214954,0.287536413054709,0,6.60695285996332,6.2566795661742,5.9906547969935,0.263772575460388,0.274462930807229,0,1.95428099300967,4.50210088025344,3.51435969886663,2.65165726926301,3.98640706237488,0.372798891650601,0.605809546665472,1.13357340160178,1.15945795480671,0,0,2.15881276655127,0.649776417447669,0,0.983110940922263,0,0,0,4.08445917352373,1.28326477414318,0,0,0,0,0,1.1418387971906,3.10725460376606,1.1875371125186,1.38788261412909,0.608930956624282,0.230615497256059,0.301445281105245,1.88141931417128,0.502666365318702,0.247194967734374,3.32578520915797,1.76922110389975,5.3383060482645,3.09178125844551,8.727754556434,7.45567044872489,1.46390398505774,3.14170060220183,0,0.11981512450592,0.599902730993408,0,6.14141621559773,10.980014467647,2.63874139437015,9.38651329038293,8.95004100656157,4.1557608911912,5.67844420737152,1.83310854930569,4.72746488318353,2.0217820674694,8.41767423545896,1.69156575851515,2.06911893990126,2.88099407688559,3.46621081022145,4.42237244483631,6.53379973452734,6.1843138209421,6.20888089773638,0.431135985865684,0.756424320671277,2.63926686245923,1.53437012699302,3.05851974148158,1.39300866608867,4.52720700097476,0.59710280045548,0,0,0.568326998791185,4.34964122324554,4.45599513964083,3.06105504483725,4.26140524053378,1.96764231747404,3.85667782218446,1.86027155800326,0.804820204198858,1.86824547787471,2.63295759861569,3.77585167381919,4.37771571547621,3.36259971078264,2.85415149878366,3.08674763148855,4.41608891984667,0.617427674275707,0,0.264450566663544,0.426576501070468,1.16118335930219,1.15980715189884,1.00841762311671,1.11189021922435,2.28270751335071,0,0.658795818896044,1.50801125280162,1.79060824837036,2.33956904542944,0.898819408654221,0.648414149624083,0.995706366271836,0.758671603812327,0.913988100877831,0,2.64746726198909,1.74557238450863,2.17421041659988,3.35153646758564,2.80459281161244,3.61097074035162,4.56569506510662,0,0.333690211432188,0.393117990226406,0,0.405720242777006,0.241177159752417,0.25462585178142,0.287696137450811,0.810676133875177,0.274561413188081,2.87536413054709,0.744281895337007,2.18426371180192,3.03094653536534,1.07638448113147,2.8946611281802,2.40179147216586,0.568474235311454,1.14075483509418,0.678980343100753,2.11221223459652,1.50755631697634,1.90434912708811,1.95133647857799,4.09851374676097,3.76489972402917,4.30527875375215,4.09658286789345,3.45369963731791,5.64131328467895,6.03165135757089,8.15858525728064,2.45882136509518,0.827810238914197,3.53211297973142,4.10240903072711,0,4.29200576247434,9.4652465824877,9.76096860741596,12.2791336707695,12.1874086955802,9.35754431146055,11.3230612315533,7.69140333182299,11.1057226006299,5.53402889125133,4.17717711348349,8.94222536812092,0.534196811001766,1.62886959353576,4.28922319728592,0,0.242780636154981,0,0.565815239267694,0.295301892880773,0.922305443831782,0.775284879504663,0.727067458955011,0.712994756769443,1.8962205476149,0,0,5.44703369206061,2.16073312837572,0.388076051348264,1.50035924522115,1.77340233642274,2.31879462882692,2.30368628842969,2.74018454203139,0.469343416127421,0,1.54369878638473,1.48397627647332,5.48979050766079,2.29189114726992,1.3130957840345,1.47726809770555,2.04036585640896,4.82105785227325,0.341741761595705,0.412773735926445,0.555583582109135,0,0.546776910884101,0.457556346413045,1.01987057996313,0.979660166265606,0.552799895217695,1.90934123603023,0.474503990371703,1.82987520414164,2.16010681643603,0.627264888043406,1.52853794622324,2.96701562046606,2.89287095038676,0.785267825952089,3.75883422546199,5.59205381778233,0,0.299033092087958,0,0,0.129159823477731,0.337912250981556,0.352071715937262,0.651021924219751,0.524296722128554,0.483168241652012,0.288030006257865,0.632022241256357,0.405450430580328,0.308132871494482,0,0.179026695667481,0,0.240390899039938,0.147689527174577,0.302899349844443,0.381034033274999,0.201652370273681,0.38983152295901,0.0962118416403295,0.233753804363138,4.76133805591944,0,0,0,2.89784391048286,7.50729901804728,9.52388446189778,1.71494703263253,1.00314420807073,6.21227026878773,8.74617949363636,5.72895513439397,9.96748457593388,8.22099023724771,8.3093328712867,7.42524750254986,9.45674526770863,8.15656336171568,8.28416498802912,0.31136204275253,1.19707462020309,1.53660245178721,0.729320151204882,0.838452650511929,2.02227859295016,3.33370091702423,1.85431551515005,2.56735367673452,4.0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| |||
|short_description=p3@Pde7b | |||
}} |
Latest revision as of 21:10, 25 September 2015
Short description: | p3@Pde7b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pde7b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1504 |
Association with transcript: | 9bp_to_ENSMUST00000166147, ENSMUST00000170683_5end |
EntrezGene: | Pde7b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 8.77e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.58e-11 | 95 |
ectoderm | 1.58e-11 | 95 |
presumptive ectoderm | 1.58e-11 | 95 |
structure with developmental contribution from neural crest | 9.89e-10 | 92 |
ecto-epithelium | 1.97e-09 | 73 |
neurectoderm | 7.65e-09 | 64 |
neural plate | 7.65e-09 | 64 |
presumptive neural plate | 7.65e-09 | 64 |
central nervous system | 2.36e-08 | 73 |
nervous system | 6.80e-08 | 75 |
occipital lobe | 7.96e-08 | 10 |
visual cortex | 7.96e-08 | 10 |
neocortex | 7.96e-08 | 10 |
autonomic nervous system | 8.77e-08 | 9 |
anatomical conduit | 8.96e-07 | 122 |