FFCP PHASE1:Hg19::chr2:201994602..201994615,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8837 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1876 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-84bp_to_ENST00000461422_5end | |||
|cluster_id=chr2:201994602..201994615,+ | |||
|coexpression_cluster_id=C1888 | |||
|description=CAGE_peak_28_at_CFLAR_5end | |||
|id=chr2:201994602..201994615,+ | |||
|ontology_enrichment_celltype=CL:0000359!1.16e-07!32;CL:0002009!1.29e-07!65;CL:0000990!2.10e-07!8;CL:0000738!2.14e-07!140;CL:0000766!6.33e-07!76;CL:0000453!6.44e-07!5;CL:0000557!6.66e-07!71;CL:0002057!9.67e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000453;2.78e-19;5!CL:0002595;2.48e-11;5!CL:0000990;1.53e-10;8!CL:0001014;8.36e-09;2!CL:0001016;8.36e-09;2!CL:0000451;1.51e-08;10!CL:0002593;4.40e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,2.67e-19,5;CL:0002595,2.79e-11,5;CL:0000990,1.50e-10,8;CL:0001014,8.26e-09,2;CL:0001016,8.26e-09,2;CL:0000451,1.48e-08,10;CL:0002593,7.78e-08,2;CL:0000738,2.61e-07,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3350;3.49e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3350,5.48e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0003081!1.14e-14!216;UBERON:0004872!1.04e-13!84;UBERON:0000055!1.45e-13!69;UBERON:0001981!6.33e-13!60;UBERON:0007500!6.33e-13!60;UBERON:0004537!6.33e-13!60;UBERON:0006965!6.33e-13!60;UBERON:0002049!2.45e-11!79;UBERON:0007798!2.45e-11!79;UBERON:0004535!1.13e-10!110;UBERON:0001009!1.68e-10!113;UBERON:0001637!3.10e-09!42;UBERON:0003509!3.10e-09!42;UBERON:0004572!3.10e-09!42;UBERON:0004573!5.29e-08!33;UBERON:0004571!5.29e-08!33;UBERON:0002193!3.53e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;2.48e-11;5!UBERON:0001533;2.48e-11;5!UBERON:0003513;4.15e-08;7!UBERON:0002456;4.40e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,2.79e-11,5;UBERON:0001533,2.79e-11,5;UBERON:0003081,8.93e-10,203;UBERON:0003513,4.50e-08,7;UBERON:0002456,7.78e-08,2 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,2.01697543935533,0.602694528023977,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0.229240217243854,0.656804715599566,0.472264687882075,0,0.383829398097213,0,0,0,0,0,0.284338464974843,0,0,0.401088894940283,0,0,0,0,0.290796477559129,0,0,0.232429036905685,0,0.929119112685311,1.43846196161075,0.512321413058201,0.236482229888585,1.72372840368309,0,4.06279459783025,0.376484679085209,0,0,0.918251677112708,0.962787081228281,1.91801137739712,0.329851300186716,0,0,1.16083695451434,2.8369261234557,0.622822248995575,0,0,0,0.605399502633369,1.47311054395026,1.26584954976354,0.211255286311942,0,0.209658645508376,0.112328631146495,0,0,0,0,0.182664153764634,1.75996244461323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0.205601498999509,0.668745981562712,0,0.473447805734733,0,0.668462741311041,0.294605907474837,0,0.541607727530031,0.25618263945135,0.650296737799391,0.164437904603676,0,0,0.14828656316206,0,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.886917589850256,0.087834785693126,0.0654895377488563,0,0,0.324547393654683,0.522389211897802,0.531831842075461,0,0,0,0.39752481473341,0,0,1.13061588384802,0,0,0.626984899610432,0.258416759169329,0.35576626268671,0,0.402829317109147,1.52054421143703,0,0.735326160691737,0,0.0892997282840798,0,0.225222960966644,1.53316637465883,0.949265659568129,0,1.31780417436063,0,0,0,0.25326102332916,2.25095607382472,0.286836620748814,0,0,1.06748995729705,0.74000264525148,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680593098960126,0.179389635688862,0,0.635795703478686,0.300091096084402,0.206105058476878,0.257640540045629,0,0,0,0,0,0.161646056818812,0.710019185033229,0.302256294682921,0.169560592310488,0.386521706326594,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0,0,0,0,1.44331342025273,0,0.234817388471643,0.577465791044295,0,0.190254152234598,0,0,0,2.10603838625314,0.594524649154913,0,1.51183915378974,1.13420077793909,0,0,0,1.97065295158377,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,1.16344544182,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,1.20575750823834,1.74306691720059,0.699810938274399,0,0,2.10833939483032,0.958499421966331,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,1.49801404789436,0,0.828831026872071,0,0,0,0.207970861530807,0.356857977594324,0.157702415033935,0.585707074963566,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0.128139149255701,0,0.482561763430822,0,0.154209693802656,1.06537035187876,0,0,0.116210378459959,0,0,0,0,0,0,0,0.231046011313244,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0.464845549297286,0.94443704049192,0,0.308033580176089,1.59691809095107,0,0.55597265731176,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0.421258456238981,0,2.19342140668156,1.05650146756755,0.272999822815972,0,0,0.551365343546124,1.32687795048244,1.75380354101505,0,0,1.01455188481352,0.6196469961995,0,0.430234056612155,0.785992328104969,1.07001315444375,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0,0,0.307160702099232,0,0,0,0.329607748453519,0,0,0.552567831062295,0,0.511343412510774,0.369254416383208,1.55519793830904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.683652335082007,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,7.70954934569617,5.93106906943214,7.10069256637097,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0.0870592065804026,0,3.78369271437556,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.407712618220842,0.523014231561666,0,0,0,0,0,0,16.8247906738761,0.279282401272254,0.229160424011684,0.717873024576814,0,0,0.223171457441873,0.0671834724867263,1.08089965062721,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,16.4230940832595,3.86900977278975,0,0,0,0,0.105600336519406,0,0,0,0,0.25426853765475,0,1.72844298240254,0,0,0.164185041498678,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0.157204305099666,0,0,0.395223263795889,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0.251567901752575,0,0,0.302461847526478,0.15543720058278,0.443565449968902,0.63718706865481,0,1.70789252563885,0,0.797525143673985,0.521745061811734,0.450772826991655,3.04644169735036,1.62748293281865,0,0.537052785212442,0,4.77715066438339,0,0,0,0,0.57785949122191,0.214441591374926,0.521988583930423,1.13352962756136,0.694567422971502,0.734210113519403,0.537266523244462,0.308801447160972,0,2.12026975135057,1.92914038270915,0,0,0,0,0,6.23552988286043,3.32162100783408,3.92556946214026,0,0,0,9.59939500103664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.354809480650555,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29485767437579,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0,0.375935671919414,0.193373663920732,2.99823467774787,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.213233981900981,0,0.129177819672012,0.0620747142958579,0,0.0636471582781649,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,1.28227396921293 | |||
|short_description=p28@CFLAR | |||
}} |
Latest revision as of 12:32, 19 September 2015
Short description: | p28@CFLAR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_CFLAR_5end |
Coexpression cluster: | C1888_hairy_migratory_immature_cord_mycosis_xeroderma_splenic |
Association with transcript: | -84bp_to_ENST00000461422_5end |
EntrezGene: | CFLAR |
HGNC: | 1876 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 2.67e-19 | 5 |
smooth muscle cell of the subclavian artery | 2.79e-11 | 5 |
conventional dendritic cell | 1.50e-10 | 8 |
CD1a-positive Langerhans cell | 8.26e-09 | 2 |
immature CD1a-positive Langerhans cell | 8.26e-09 | 2 |
dendritic cell | 1.48e-08 | 10 |
smooth muscle cell of the internal thoracic artery | 7.78e-08 | 2 |
leukocyte | 2.61e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 2.79e-11 | 5 |
subclavian artery | 2.79e-11 | 5 |
lateral plate mesoderm | 8.93e-10 | 203 |
trunk blood vessel | 4.50e-08 | 7 |
internal thoracic artery | 7.78e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
mesenchymal cell neoplasm | 5.48e-08 | 2 |