FFCP PHASE1:Hg19::chr2:20133198..20133223,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:20133198..20133223,- | |||
|coexpression_cluster_id=C619 | |||
|description=CAGE_peak_at_chr2:20133198..20133223,- | |||
|id=chr2:20133198..20133223,- | |||
|ontology_enrichment_celltype=CL:0000066!2.68e-30!254;CL:0002139!4.29e-18!24;CL:0002076!3.80e-15!43;CL:0000076!1.23e-14!62;CL:0000220!2.84e-14!246;CL:0002321!5.83e-14!248;CL:0000115!3.62e-13!35;CL:0002368!4.67e-13!13;CL:0000223!3.83e-12!59;CL:0000213!6.92e-12!57;CL:0000215!6.92e-12!57;CL:0000071!8.11e-12!18;CL:0002546!8.11e-12!18;CL:0002078!2.99e-11!44;CL:0002202!6.42e-09!9;CL:0002632!6.42e-09!9;CL:0005020!3.02e-08!6;CL:0002138!3.02e-08!6;CL:0005022!3.02e-08!6;CL:0000082!1.86e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002368;2.53e-16;13!CL:0002202;6.89e-11;9!CL:0002632;6.89e-11;9!CL:0002138;8.56e-10;6!CL:0002076;1.96e-09;42!CL:0002328;5.72e-09;3!CL:0000307;5.72e-09;3!CL:0002139;8.56e-09;24!CL:0000115;1.95e-08;36!CL:0000082;7.30e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.14e-18,253;CL:0002368,1.64e-16,13;CL:0002076,1.08e-12,42;CL:0002202,5.61e-11,9;CL:0002632,5.61e-11,9;CL:0000115,7.06e-10,36;CL:0005020,8.46e-10,6;CL:0002138,8.46e-10,6;CL:0005022,8.46e-10,6;CL:0002328,3.98e-09,3;CL:0000068,5.97e-09,3;CL:0000069,5.97e-09,3;CL:0000307,5.97e-09,3;CL:0000377,5.97e-09,3;CL:0002139,7.55e-09,24;CL:0000223,1.03e-08,58;CL:0000082,6.02e-08,19;CL:0002078,1.15e-07,45 | |||
|ontology_enrichment_development_v019=CL:0005022;8.56e-10;6!UBERON:0009847;2.98e-09;3!UBERON:0003353;2.98e-09;3!CL:0000377;5.72e-09;3 | |||
|ontology_enrichment_disease=DOID:305!1.48e-08!106;DOID:3908!5.87e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:4556;5.72e-09;3!DOID:1749;2.67e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,4.88e-09,3;DOID:1749,2.07e-07,14;DOID:305,3.04e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000487!1.49e-13!22;UBERON:0001986!8.11e-12!18;UBERON:0004638!8.11e-12!18;UBERON:0004852!8.11e-12!18;UBERON:0006914!2.99e-11!25;UBERON:0005153!4.67e-11!37;UBERON:0005911!2.89e-10!82;UBERON:0004119!2.48e-09!169;UBERON:0000925!2.48e-09!169;UBERON:0006595!2.48e-09!169;UBERON:0000065!1.57e-08!53;UBERON:0005178!1.73e-08!34;UBERON:0002224!1.73e-08!34;UBERON:0005181!4.35e-08!35;UBERON:0000119!5.10e-08!312;UBERON:0001007!8.20e-08!155;UBERON:0001555!8.20e-08!155;UBERON:0007026!8.20e-08!155;UBERON:0001004!1.07e-07!72;UBERON:0005157!1.18e-07!51;UBERON:0000464!1.31e-07!104;UBERON:0007196!1.41e-07!14;UBERON:0001558!1.41e-07!14;UBERON:0004807!1.45e-07!28;UBERON:0000483!1.73e-07!309;UBERON:0004802!1.86e-07!19;UBERON:0000115!1.86e-07!19;UBERON:0006554!3.07e-07!44;UBERON:0004921!5.01e-07!129;UBERON:0004185!5.01e-07!129;UBERON:0008947!5.37e-07!38;UBERON:0003258!5.37e-07!38;UBERON:0004111!5.68e-07!241;UBERON:0001008!5.99e-07!45;UBERON:0002048!6.39e-07!22;UBERON:0000117!6.39e-07!22;UBERON:0000171!6.39e-07!22;UBERON:0000170!6.39e-07!22;UBERON:0005597!6.39e-07!22;UBERON:0000118!6.39e-07!22;UBERON:0005177!6.62e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0004807;1.85e-09;22!UBERON:0004815;5.72e-09;3!UBERON:0002031;5.72e-09;3!UBERON:0004802;7.30e-08;19!UBERON:0000115;7.30e-08;19!UBERON:0005181;1.37e-07;35!UBERON:0005178;1.48e-07;34!UBERON:0002224;1.48e-07;34!UBERON:0001473;1.86e-07;8!UBERON:0004536;1.86e-07;8!UBERON:0006558;1.86e-07;8!UBERON:0004913;2.42e-07;1!UBERON:0003703;2.42e-07;1!UBERON:0001174;2.42e-07;1!UBERON:0004914;2.42e-07;1!UBERON:0005911;3.57e-07;36!UBERON:0000065;4.80e-07;44!UBERON:0002394;6.24e-07;4!UBERON:0003928;6.24e-07;4!UBERON:0002048;9.34e-07;22!UBERON:0000117;9.34e-07;22!UBERON:0000171;9.34e-07;22!UBERON:0000170;9.34e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005911,6.42e-10,82;UBERON:0005153,2.17e-09,37;UBERON:0004815,3.98e-09,3;UBERON:0002031,3.98e-09,3;UBERON:0004119,1.82e-08,160;UBERON:0000925,1.82e-08,160;UBERON:0006595,1.82e-08,160;UBERON:0005178,5.66e-08,34;UBERON:0002224,5.66e-08,34;UBERON:0004802,6.02e-08,19;UBERON:0000115,6.02e-08,19;UBERON:0001004,6.29e-08,74;UBERON:0000065,9.08e-08,54;UBERON:0005181,1.01e-07,35;UBERON:0004913,1.72e-07,1;UBERON:0003703,1.72e-07,1;UBERON:0001174,1.72e-07,1;UBERON:0004914,1.72e-07,1;UBERON:0001473,1.84e-07,8;UBERON:0004536,1.84e-07,8;UBERON:0006558,1.84e-07,8;UBERON:0004807,2.50e-07,28;UBERON:0005157,3.80e-07,47;UBERON:0008947,4.82e-07,38;UBERON:0003258,4.82e-07,38;UBERON:0002048,7.93e-07,22;UBERON:0000117,7.93e-07,22;UBERON:0000171,7.93e-07,22;UBERON:0000170,7.93e-07,22;UBERON:0005597,7.93e-07,22;UBERON:0000118,7.93e-07,22 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0.596287222100115,0,0.694281003215189,1.69592382577203,0.419499436209906,0.550236083880135,0.417989933073621,0.775250277507987,0.35576626268671,2.00832367658802,0.402829317109147,0.760272105718513,0.732186172644509,2.20597848207521,0,2.67899184852239,0.44905874525234,0.900891843866578,0,0,0.549605231791222,0,0,0,0,0.506522046658319,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0.140450806702248,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0.386521706326594,0,1.14721838155602,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.402115889646523,0.0925884451585296,0,0,0,0,0,1.58803092537181,0.462985512576611,1.52203321787679,0,0,0,0,0,0.93733833986777,0.335964256397719,0.283550194484773,1.16426079513703,0,0,0,0.088048434013226,0,0,0,0.063497894292169,0,0,0,0,0,0.285826432630578,0.224262168690721,0,0.5867062865676,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.120859449591622,0.40101294060657,0.0920809889358963,0,0.182091168006717,0,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,1.72732732881711,1.54227252690289,0,0,0.509752546090077,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0.154048617114644,0,0,0,0.145016693914229,0.0852266274161009,0,2.47927373041467,0.192190067365106,1.65896526242959,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,1.82822014178473,0.670302275535787,1.08890984861323,0,0,0,0,1.37834040124176,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0.568272293612826,0,0,0,0,0,1.33570446027487,0,0,0,0,0,0,0,0,1.3480252672099,0,0,0,0,0,0,0.185536196323703,0,0,0.174919999992391,0,0.341380344856499,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.32681539055697,0,0,0,0,0,0,0.638002319463839,0.183195186803725,0,0,0,0,0,0,0,0,0,0.421996129056054,0.652931232636591,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0.252746318513952,0,0,0.664653872707185,0,1.56966459203613,0,0.284609546029793,0.693373365065693,2.2562765983567,0.391969589657511,2.96001302373369,0.17472666824203,0,0,0.0730893170861856,0,0.193978032976839,0,0,0,0,0.0633107959558787,0.391102765469606,0.240476460754601,0,0,0,0.229073192331831,0,0.14405479798815,0.124252535565433,0,0,0.313808538937,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0.0787831823072236,0.0824158583811665,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.236417121897595,0.0524545881349981,1.5840050477911,0.896436696664224,1.53532157855556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513260513652988,0,0.106787412567695,0,0,0,0,0,1.91502377331055,0,0,0.306345576763462,0.327872630709804,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0.226705925512272,0.463044948647668,0.244736704506468,0.179088841081487,0,0,0.883445729729405,0.192914038270915,0.168942440653073,0,0,0.303859956177382,0,0,0,0,0,0,0.211312123358627,0,0.106691729694141,0,0.567515953566836,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0.462102664601353,0,0.690359926060101,0,0,0,0,0,0,1.6264169483875,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0.0679697329768317,0,1.18193840883968,2.11339663594931,0.156986185701028,0,0,0,0.647782773655864,0,0.0714765441766563,0,0,0,0,0.414432328326074,1.3657478167516,0,0,0.354996002191696,0.340853619036631,0,1.3746412112643,0,0,0,0,0,0,0.307988420568741,0,0.485710993059139,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,35.3864427099232,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.124149428591716,0.112131862580613,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0.0814032686109745,2.45472895518746,0,0.628776414746108,0,0,0,0,0,0 | |||
|short_description=p@chr2:20133198..20133223,- | |||
}} |
Latest revision as of 04:51, 29 July 2015
Short description: | p@chr2:20133198..20133223, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:20133198..20133223, - |
Coexpression cluster: | C619_squamous_bile_Small_Mammary_mucinous_Tracheal_giant |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.14e-18 | 253 |
respiratory epithelial cell | 1.64e-16 | 13 |
endo-epithelial cell | 1.08e-12 | 42 |
epithelial cell of tracheobronchial tree | 5.61e-11 | 9 |
epithelial cell of lower respiratory tract | 5.61e-11 | 9 |
endothelial cell | 7.06e-10 | 36 |
lymphangioblast | 8.46e-10 | 6 |
endothelial cell of lymphatic vessel | 8.46e-10 | 6 |
vascular lymphangioblast | 8.46e-10 | 6 |
bronchial epithelial cell | 3.98e-09 | 3 |
duct epithelial cell | 5.97e-09 | 3 |
branched duct epithelial cell | 5.97e-09 | 3 |
tracheal epithelial cell | 5.97e-09 | 3 |
tracheoblast | 5.97e-09 | 3 |
endothelial cell of vascular tree | 7.55e-09 | 24 |
endodermal cell | 1.03e-08 | 58 |
epithelial cell of lung | 6.02e-08 | 19 |
meso-epithelial cell | 1.15e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
endo-epithelium | 6.42e-10 | 82 |
epithelial bud | 2.17e-09 | 37 |
lower respiratory tract epithelium | 3.98e-09 | 3 |
epithelium of bronchus | 3.98e-09 | 3 |
endoderm-derived structure | 1.82e-08 | 160 |
endoderm | 1.82e-08 | 160 |
presumptive endoderm | 1.82e-08 | 160 |
thoracic cavity element | 5.66e-08 | 34 |
thoracic cavity | 5.66e-08 | 34 |
respiratory tract epithelium | 6.02e-08 | 19 |
lung epithelium | 6.02e-08 | 19 |
respiratory system | 6.29e-08 | 74 |
respiratory tract | 9.08e-08 | 54 |
thoracic segment organ | 1.01e-07 | 35 |
hepatopancreatic ampulla | 1.72e-07 | 1 |
extrahepatic bile duct | 1.72e-07 | 1 |
common bile duct | 1.72e-07 | 1 |
duodenal papilla | 1.72e-07 | 1 |
lymphatic vessel | 1.84e-07 | 8 |
lymph vasculature | 1.84e-07 | 8 |
lymphatic part of lymphoid system | 1.84e-07 | 8 |
respiratory system epithelium | 2.50e-07 | 28 |
epithelial fold | 3.80e-07 | 47 |
respiratory primordium | 4.82e-07 | 38 |
endoderm of foregut | 4.82e-07 | 38 |
lung | 7.93e-07 | 22 |
respiratory tube | 7.93e-07 | 22 |
respiration organ | 7.93e-07 | 22 |
pair of lungs | 7.93e-07 | 22 |
lung primordium | 7.93e-07 | 22 |
lung bud | 7.93e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 4.88e-09 | 3 |
squamous cell carcinoma | 2.07e-07 | 14 |
carcinoma | 3.04e-07 | 106 |