FFCP PHASE1:Mm9::chr10:120748045..120748059,-: Difference between revisions
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{{FFCP|EntrezGene=74694|HGNC=|MCL_coexpression_id=1|UniProt=Q69ZT9|association_with_transcript=185bp_to_ENSMUST00000064107,NM_029057,uc007hfm.2_5end|description=CAGE_peak_1_at_Tbc1d30_5end|id=chr10:120748045..120748059,-|ontology_enrichment_celltype=CL:0000117!1.51e-12!23;CL:0000337!1.51e-12!23;CL:0000540!3.56e-09!33;CL:0000047!3.56e-09!33;CL:0000031!3.56e-09!33;CL:0000404!3.56e-09!33;CL:0000221!8.43e-07!44;CL:0000133!8.43e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,2.98e-16,23;CL:0000337,2.98e-16,23;CL:0000540,9.45e-09,33;CL:0000047,9.45e-09,33;CL:0000031,9.45e-09,33;CL:0000404,9.45e-09,33;CL:0000791,1.66e-07,9;CL:0000789,1.66e-07,9;CL:0002420,1.66e-07,9;CL:0002419,1.66e-07,9;CL:0000790,1.66e-07,9;CL:0000624,4.74e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!4.12e-22!63;UBERON:0004121!8.32e-22!102;UBERON:0000924!8.32e-22!102;UBERON:0006601!8.32e-22!102;UBERON:0001049!2.00e-21!52;UBERON:0005068!2.00e-21!52;UBERON:0006241!2.00e-21!52;UBERON:0007135!2.00e-21!52;UBERON:0002346!3.28e-21!71;UBERON:0003075!3.28e-21!71;UBERON:0007284!3.28e-21!71;UBERON:0001017!5.43e-21!73;UBERON:0005743!5.43e-21!73;UBERON:0000073!7.76e-21!75;UBERON:0001016!7.76e-21!75;UBERON:0000955!7.72e-20!50;UBERON:0006238!7.72e-20!50;UBERON:0002616!3.13e-19!49;UBERON:0003056!5.60e-19!49;UBERON:0002020!2.19e-17!34;UBERON:0007811!1.51e-16!86;UBERON:0003080!2.66e-16!40;UBERON:0002780!1.12e-15!39;UBERON:0001890!1.12e-15!39;UBERON:0006240!1.12e-15!39;UBERON:0000153!2.18e-14!94;UBERON:0002791!3.30e-14!29;UBERON:0003528!3.30e-14!29;UBERON:0001893!3.30e-14!29;UBERON:0000956!3.20e-10!21;UBERON:0001869!3.20e-10!21;UBERON:0000203!3.20e-10!21;UBERON:0002021!1.48e-08!10;UBERON:0000411!1.48e-08!10;UBERON:0001950!1.48e-08!10;UBERON:0002619!2.72e-08!17;UBERON:0000025!7.17e-08!114;UBERON:0004111!4.65e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.16e-27,54;UBERON:0002346,2.27e-26,64;UBERON:0003075,2.27e-26,64;UBERON:0007284,2.27e-26,64;UBERON:0001049,3.43e-26,52;UBERON:0005068,3.43e-26,52;UBERON:0006241,3.43e-26,52;UBERON:0007135,3.43e-26,52;UBERON:0010371,6.12e-26,73;UBERON:0002020,1.41e-23,34;UBERON:0004121,2.58e-23,95;UBERON:0000924,2.58e-23,95;UBERON:0006601,2.58e-23,95;UBERON:0001017,2.20e-22,73;UBERON:0003056,3.66e-22,49;UBERON:0000955,7.88e-22,47;UBERON:0006238,7.88e-22,47;UBERON:0001016,3.04e-21,75;UBERON:0002616,4.75e-21,46;UBERON:0003080,6.65e-20,40;UBERON:0003528,2.73e-19,29;UBERON:0002791,2.73e-19,29;UBERON:0001893,2.73e-19,29;UBERON:0002780,4.40e-19,39;UBERON:0001890,4.40e-19,39;UBERON:0006240,4.40e-19,39;UBERON:0000956,6.24e-14,21;UBERON:0001869,6.24e-14,21;UBERON:0000203,6.24e-14,21;UBERON:0010314,3.29e-13,92;UBERON:0002619,2.44e-11,17;UBERON:0002021,6.43e-11,10;UBERON:0000411,6.43e-11,10;UBERON:0001950,6.43e-11,10;UBERON:0000025,7.34e-09,114;UBERON:0004111,1.14e-07,122;UBERON:0000483,3.68e-07,174;UBERON:0000119,7.58e-07,176;UBERON:0003076,8.11e-07,12;UBERON:0003057,8.11e-07,12|phase1_expression=0.640595388419176,0,0,0,0,0.839396359559449,0,13.9453189316902,23.7932940436317,9.83071010552373,12.1564757440109,2.15384829287408,9.41604014621631,5.24522414513984,0.333109761815663,0,0,0,0.137114433605739,0,5.18764069921526,0,0,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.55994568650145,1.43752564364972,0.503347818173209,15.9579671242496,4.36921938885203,0,0,0.515672092277442,9.3065571995415,7.40587370980846,3.80298842103708,0,0,0,0,0,0,0,5.49554945234932,5.13022565660425,5.04779907243317,15.1395021734016,10.3808214247258,4.77714116938321,5.65488279007595,6.43453150627015,8.8092704799511,11.6195477657521,10.9060638611933,6.72620067423989,5.03182039813253,3.12548022334056,12.5632349550621,9.00420176050688,9.32069311438542,16.7938293719991,12.386336229522,14.5391567743734,0.302904773332736,0.377857800533928,0.289864488701678,1.72084775396277,0,1.61910957491345,0,0,1.12355536105401,0,0,0,2.25349471642689,0,0,0,1.73192832808971,1.26679932737549,4.04419556011827,1.37020655662872,1.29468941823586,0.148442139064825,0.346970653532272,0.608930956624282,0.230615497256059,0.301445281105245,0.117588707135705,0,0,0.144599356919912,0,0.161766849947409,0,0,0,8.78342391034641,4.81727425670947,0,0.239630249011841,0,0,13.9305294646485,21.0450277296568,7.03664371832041,22.7709859451882,23.5258220743904,12.0517065844545,11.1946471516753,0,0,0,11.995185785529,0.260240885925407,0.689706313300419,1.62055916824814,1.65775299619287,4.150226448231,4.09963904911519,4.12287588062807,15.0047955028629,0,0,0,0.219195732427575,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0.402619256281115,11.565947171027,4.93942139420565,0,0,0,0,0.128867461322093,0.403367049246685,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0.379335801906163,0,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0.296452627087149,0.166845105716094,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74694 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q69ZT9 | |||
|association_with_transcript=185bp_to_ENSMUST00000064107,NM_029057,uc007hfm.2_5end | |||
|cluster_id=chr10:120748045..120748059,- | |||
|description=CAGE_peak_1_at_Tbc1d30_5end | |||
|id=chr10:120748045..120748059,- | |||
|ontology_enrichment_celltype=CL:0000117!1.51e-12!23;CL:0000337!1.51e-12!23;CL:0000540!3.56e-09!33;CL:0000047!3.56e-09!33;CL:0000031!3.56e-09!33;CL:0000404!3.56e-09!33;CL:0000221!8.43e-07!44;CL:0000133!8.43e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.98e-16,23;CL:0000337,2.98e-16,23;CL:0000540,9.45e-09,33;CL:0000047,9.45e-09,33;CL:0000031,9.45e-09,33;CL:0000404,9.45e-09,33;CL:0000791,1.66e-07,9;CL:0000789,1.66e-07,9;CL:0002420,1.66e-07,9;CL:0002419,1.66e-07,9;CL:0000790,1.66e-07,9;CL:0000624,4.74e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.12e-22!63;UBERON:0004121!8.32e-22!102;UBERON:0000924!8.32e-22!102;UBERON:0006601!8.32e-22!102;UBERON:0001049!2.00e-21!52;UBERON:0005068!2.00e-21!52;UBERON:0006241!2.00e-21!52;UBERON:0007135!2.00e-21!52;UBERON:0002346!3.28e-21!71;UBERON:0003075!3.28e-21!71;UBERON:0007284!3.28e-21!71;UBERON:0001017!5.43e-21!73;UBERON:0005743!5.43e-21!73;UBERON:0000073!7.76e-21!75;UBERON:0001016!7.76e-21!75;UBERON:0000955!7.72e-20!50;UBERON:0006238!7.72e-20!50;UBERON:0002616!3.13e-19!49;UBERON:0003056!5.60e-19!49;UBERON:0002020!2.19e-17!34;UBERON:0007811!1.51e-16!86;UBERON:0003080!2.66e-16!40;UBERON:0002780!1.12e-15!39;UBERON:0001890!1.12e-15!39;UBERON:0006240!1.12e-15!39;UBERON:0000153!2.18e-14!94;UBERON:0002791!3.30e-14!29;UBERON:0003528!3.30e-14!29;UBERON:0001893!3.30e-14!29;UBERON:0000956!3.20e-10!21;UBERON:0001869!3.20e-10!21;UBERON:0000203!3.20e-10!21;UBERON:0002021!1.48e-08!10;UBERON:0000411!1.48e-08!10;UBERON:0001950!1.48e-08!10;UBERON:0002619!2.72e-08!17;UBERON:0000025!7.17e-08!114;UBERON:0004111!4.65e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.16e-27,54;UBERON:0002346,2.27e-26,64;UBERON:0003075,2.27e-26,64;UBERON:0007284,2.27e-26,64;UBERON:0001049,3.43e-26,52;UBERON:0005068,3.43e-26,52;UBERON:0006241,3.43e-26,52;UBERON:0007135,3.43e-26,52;UBERON:0010371,6.12e-26,73;UBERON:0002020,1.41e-23,34;UBERON:0004121,2.58e-23,95;UBERON:0000924,2.58e-23,95;UBERON:0006601,2.58e-23,95;UBERON:0001017,2.20e-22,73;UBERON:0003056,3.66e-22,49;UBERON:0000955,7.88e-22,47;UBERON:0006238,7.88e-22,47;UBERON:0001016,3.04e-21,75;UBERON:0002616,4.75e-21,46;UBERON:0003080,6.65e-20,40;UBERON:0003528,2.73e-19,29;UBERON:0002791,2.73e-19,29;UBERON:0001893,2.73e-19,29;UBERON:0002780,4.40e-19,39;UBERON:0001890,4.40e-19,39;UBERON:0006240,4.40e-19,39;UBERON:0000956,6.24e-14,21;UBERON:0001869,6.24e-14,21;UBERON:0000203,6.24e-14,21;UBERON:0010314,3.29e-13,92;UBERON:0002619,2.44e-11,17;UBERON:0002021,6.43e-11,10;UBERON:0000411,6.43e-11,10;UBERON:0001950,6.43e-11,10;UBERON:0000025,7.34e-09,114;UBERON:0004111,1.14e-07,122;UBERON:0000483,3.68e-07,174;UBERON:0000119,7.58e-07,176;UBERON:0003076,8.11e-07,12;UBERON:0003057,8.11e-07,12 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0.839396359559449,0,13.9453189316902,23.7932940436317,9.83071010552373,12.1564757440109,2.15384829287408,9.41604014621631,5.24522414513984,0.333109761815663,0,0,0,0.137114433605739,0,5.18764069921526,0,0,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.55994568650145,1.43752564364972,0.503347818173209,15.9579671242496,4.36921938885203,0,0,0.515672092277442,9.3065571995415,7.40587370980846,3.80298842103708,0,0,0,0,0,0,0,5.49554945234932,5.13022565660425,5.04779907243317,15.1395021734016,10.3808214247258,4.77714116938321,5.65488279007595,6.43453150627015,8.8092704799511,11.6195477657521,10.9060638611933,6.72620067423989,5.03182039813253,3.12548022334056,12.5632349550621,9.00420176050688,9.32069311438542,16.7938293719991,12.386336229522,14.5391567743734,0.302904773332736,0.377857800533928,0.289864488701678,1.72084775396277,0,1.61910957491345,0,0,1.12355536105401,0,0,0,2.25349471642689,0,0,0,1.73192832808971,1.26679932737549,4.04419556011827,1.37020655662872,1.29468941823586,0.148442139064825,0.346970653532272,0.608930956624282,0.230615497256059,0.301445281105245,0.117588707135705,0,0,0.144599356919912,0,0.161766849947409,0,0,0,8.78342391034641,4.81727425670947,0,0.239630249011841,0,0,13.9305294646485,21.0450277296568,7.03664371832041,22.7709859451882,23.5258220743904,12.0517065844545,11.1946471516753,0,0,0,11.995185785529,0.260240885925407,0.689706313300419,1.62055916824814,1.65775299619287,4.150226448231,4.09963904911519,4.12287588062807,15.0047955028629,0,0,0,0.219195732427575,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0.402619256281115,11.565947171027,4.93942139420565,0,0,0,0,0.128867461322093,0.403367049246685,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0.379335801906163,0,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0.296452627087149,0.166845105716094,0,0,0,0,0.25462585178142,0.287696137450811,0.324270453550071,0.274561413188081,0,0.744281895337007,0,0.252578877947112,0.538192240565737,0,9.79191907883005,0,0.162964976442026,0,0.469380496577004,0.837531287209079,1.19021820443007,5.65887578787617,2.99506773801763,3.98636441367795,4.30527875375215,6.882259218061,3.7990696010497,4.62876987460837,0,0,0,0,14.2890025089135,7.85318300167761,0,0.252470927204373,0.315508219416257,0,0.646270193198397,0,0,0.849229592366497,0.404810701674894,0.292255857911312,0.395287777946524,11.5675673911851,0.283880170416537,0,0.325773918707152,0.659880491890142,0,0,0.302323556964751,0,0,0,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,1.36175842301515,0.36012218806262,0.258717367565509,1.71469628025274,1.24138163549592,1.60531935841864,0.987294123612726,1.2178597964584,0,0,0.220528398054962,2.4732937941222,0.484393280087717,1.56813604813205,3.22305328808468,3.11867709515616,0,14.6485988588303,0,0,0,0.188368457004691,0,0.228778173206523,0,0.139951452323658,0,2.86401185404534,0.474503990371703,0.203319467126849,0,0.418176592028937,0,0,0,1.30877970992015,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,5.4685841634459,4.61381115473128,1.20792060413003,0.576060012515731,0.316011120628178,0,0,0.129920822977795,0,0,0.240390899039938,0,0,0.15241361331,0,0.0974578807397524,0.192423683280659,0.116876902181569,0.453460767230423,0,0,0,0,0,0.36630324853453,0,0,27.1080884456192,22.0956113523445,24.0616115644547,22.1690605223357,22.6077231524312,24.1726047164704,18.9006300064906,22.9663813644352,29.0011141749891,18.6393712230655,1.14166082342594,1.19707462020309,1.19513524027894,0.729320151204882,1.67690530102386,1.2869045591501,0.44449345560323,0.824140228955577,1.92551525755089,0.505394423527595,1.52087579934144,1.32038438970253,1.68554713445788,1.92075457214608,1.55075766180156,3.33405583898152,1.39061191133827,1.15745532278223,1.23625770240992,1.76638704161277,1.37147700954166,0.887379030796687,0.953744759789284,0.145346416632329,1.41164070622996,1.4384483341585,1.09756783723664,1.8414879800649,1.35804113845862,0.561142271657738,1.18635018124174,1.37906275325789,0,2.47898945897546,0.964533054905707,2.24829520144151,2.8071793013449,2.14871054048298,0.956441660344217,0.441182838239031,0.463735671240843 | |||
|short_description=p1@Tbc1d30 | |||
}} |
Latest revision as of 16:27, 25 September 2015
Short description: | p1@Tbc1d30 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tbc1d30_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 185bp_to_ENSMUST00000064107, NM_029057, uc007hfm.2_5end |
EntrezGene: | Tbc1d30 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.98e-16 | 23 |
neuroblast (sensu Vertebrata) | 2.98e-16 | 23 |
neuron | 9.45e-09 | 33 |
neuronal stem cell | 9.45e-09 | 33 |
neuroblast | 9.45e-09 | 33 |
electrically signaling cell | 9.45e-09 | 33 |
mature alpha-beta T cell | 1.66e-07 | 9 |
alpha-beta T cell | 1.66e-07 | 9 |
immature T cell | 1.66e-07 | 9 |
mature T cell | 1.66e-07 | 9 |
immature alpha-beta T cell | 1.66e-07 | 9 |
CD4-positive, alpha-beta T cell | 4.74e-07 | 8 |