FFCP PHASE1:Hg19::chr2:197106945..197106973,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57520 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29853 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=5bp_to_ENST00000498146_5end | |||
|cluster_id=chr2:197106945..197106973,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_11_at_HECW2_5end | |||
|id=chr2:197106945..197106973,- | |||
|ontology_enrichment_celltype=CL:0002057!1.37e-71!42;CL:0000860!6.97e-66!45;CL:0000766!1.12e-62!76;CL:0000738!3.54e-61!140;CL:0002009!2.93e-54!65;CL:0002194!9.09e-54!63;CL:0000576!9.09e-54!63;CL:0000040!9.09e-54!63;CL:0000559!9.09e-54!63;CL:0002087!5.14e-51!119;CL:0000037!1.00e-48!172;CL:0000566!1.00e-48!172;CL:0000557!1.84e-48!71;CL:0000839!5.50e-47!70;CL:0002032!4.26e-45!165;CL:0000837!4.26e-45!165;CL:0000988!7.49e-45!182;CL:0002031!1.84e-44!124;CL:0000763!8.96e-44!112;CL:0000049!8.96e-44!112;CL:0002393!2.93e-17!9;CL:0002397!2.93e-17!9;CL:0000094!1.34e-16!8;CL:0000134!1.02e-13!358;CL:0002320!4.60e-13!365;CL:0000081!1.49e-11!11;CL:0000219!2.62e-11!390;CL:0000048!3.84e-08!430;CL:0000723!8.96e-08!436;CL:0000034!9.14e-08!444;CL:0000775!1.35e-07!3;CL:0000875!6.90e-07!3;CL:0002396!6.90e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.53e-59;33!CL:0002057;3.53e-59;33!CL:0000576;1.10e-47;48!CL:0000473;6.70e-41;39!CL:0000234;6.70e-41;39!CL:0000766;1.27e-36;69!CL:0000094;3.37e-28;8!CL:0002393;3.35e-20;6!CL:0002397;3.35e-20;6!CL:0000081;4.10e-20;11!CL:0000763;5.83e-17;100!CL:0002087;2.05e-16;104!CL:0000738;1.79e-13;136!CL:0000775;2.73e-12;3!CL:0000875;4.82e-11;3!CL:0002396;4.82e-11;3!CL:0000226;1.28e-10;3!CL:0000767;1.28e-10;3!CL:0000842;1.28e-10;3!CL:0000771;8.57e-09;2!CL:0000988;5.11e-08;177!CL:0000219;6.22e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.95e-94,42;CL:0002057,5.95e-94,42;CL:0000473,4.44e-81,48;CL:0000234,4.44e-81,48;CL:0000766,6.41e-80,72;CL:0002009,2.23e-64,61;CL:0002194,4.65e-63,59;CL:0000576,4.65e-63,59;CL:0000040,4.65e-63,59;CL:0000559,4.65e-63,59;CL:0000557,6.94e-58,67;CL:0000839,1.58e-55,66;CL:0000738,4.56e-53,136;CL:0000763,1.21e-52,108;CL:0000049,1.21e-52,108;CL:0000037,6.81e-41,168;CL:0002087,1.64e-40,115;CL:0000988,2.95e-38,177;CL:0002032,2.72e-37,161;CL:0000837,2.72e-37,161;CL:0002031,3.25e-34,120;CL:0002393,1.57e-29,9;CL:0002397,1.57e-29,9;CL:0000094,2.37e-28,8;CL:0000081,3.19e-20,11;CL:0000134,1.48e-13,354;CL:0002320,4.48e-13,361;CL:0000775,2.64e-12,3;CL:0000219,2.19e-11,386;CL:0000875,4.74e-11,3;CL:0002396,4.74e-11,3;CL:0000767,9.41e-11,3;CL:0000226,1.62e-10,3;CL:0000842,1.62e-10,3;CL:0000048,2.51e-09,427;CL:0000034,2.52e-09,441;CL:0000723,4.82e-09,433;CL:0000771,8.57e-09,2 | |||
|ontology_enrichment_development_v019=CL:0002057;5.16e-65;42!CL:0000049;6.05e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.21e-55!102;UBERON:0003061!1.21e-55!102;UBERON:0002193!6.03e-51!112;UBERON:0002371!2.15e-41!80;UBERON:0001474!1.66e-37!86;UBERON:0002405!4.88e-31!115;UBERON:0004765!8.05e-30!101;UBERON:0001434!8.05e-30!101;UBERON:0003081!9.03e-18!216;UBERON:0000178!3.52e-14!15;UBERON:0000179!3.52e-14!15;UBERON:0000463!3.52e-14!15;UBERON:0002204!1.92e-13!167;UBERON:0002384!9.05e-13!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.59e-25;15!UBERON:0000179;3.59e-25;15!UBERON:0000463;3.59e-25;15!UBERON:0002390;2.11e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.61e-67,98;UBERON:0003061,3.61e-67,98;UBERON:0002193,5.21e-60,108;UBERON:0002371,4.80e-50,76;UBERON:0001474,9.17e-46,82;UBERON:0004765,6.18e-41,90;UBERON:0002405,2.45e-39,93;UBERON:0001434,5.61e-36,100;UBERON:0003081,5.43e-27,203;UBERON:0000178,3.69e-25,15;UBERON:0000179,3.69e-25,15;UBERON:0000463,3.69e-25,15;UBERON:0002204,4.83e-18,167;UBERON:0000926,1.38e-13,315;UBERON:0004120,1.38e-13,315;UBERON:0006603,1.38e-13,315;UBERON:0002384,2.02e-12,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,7.47392126012918,1.53531759238885,1.85779347979291,0,0,0,2.71135202031056,0.853015394924529,0,5.53995408531877,7.82123345133553,4.55722828503289,0.223915474239924,0,0,2.18097358169347,0.755751887377619,0.727752183563449,1.85943229524548,0.411167888021826,3.09706370895104,4.31538588483226,1.5369642391746,3.78371567821736,19.6505038019873,7.10033151942209,14.8969135253776,2.63539275359647,0.545812300115692,1.34834090667051,28.7718858828648,10.5906578935111,26.8521592835597,0,0.199463657621632,0.852449501065388,9.86711411337186,3.40431134814684,11.2108004819203,3.26623264833766,1.0429658368404,4.77815458351257,9.08099253950053,8.10210799172642,13.9243450473989,2.11255286311942,2.76385589954557,1.46761051855863,4.26848798356681,3.30389164251314,2.89306056054744,5.41524213108372,2.78483348078726,3.28795476776341,0,1.09227722252426,0,0.426730222566507,0.800791974072025,0,0.661044872784862,0,0,0,1.14681968437569,0,1.12101712596307,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.9916918359339,38.7780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0,0,0,0,0,38.9483652452535,11.966458368161,55.9460943138648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,7.76571122947021,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.56702848308952,1.52927441428475,5.69647187174163,2.85878130549347,3.70226045777575,7.13320642311989,2.70015718619057,2.37937552888281,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0.659215496907038,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.349843349309,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0.243585196761792,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0.426766918776564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.751871343838829,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.0645889098360061,0,0,0.0636471582781649,0,0,0,0.606168477131288,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p11@HECW2 | |||
}} |
Latest revision as of 06:52, 19 September 2015
Short description: | p11@HECW2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_HECW2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 5bp_to_ENST00000498146_5end |
EntrezGene: | HECW2 |
HGNC: | 29853 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.61e-67 | 98 |
blood island | 3.61e-67 | 98 |
hemolymphoid system | 5.21e-60 | 108 |
bone marrow | 4.80e-50 | 76 |
bone element | 9.17e-46 | 82 |
skeletal element | 6.18e-41 | 90 |
immune system | 2.45e-39 | 93 |
skeletal system | 5.61e-36 | 100 |
lateral plate mesoderm | 5.43e-27 | 203 |
blood | 3.69e-25 | 15 |
haemolymphatic fluid | 3.69e-25 | 15 |
organism substance | 3.69e-25 | 15 |
musculoskeletal system | 4.83e-18 | 167 |
mesoderm | 1.38e-13 | 315 |
mesoderm-derived structure | 1.38e-13 | 315 |
presumptive mesoderm | 1.38e-13 | 315 |
connective tissue | 2.02e-12 | 371 |