FFCP PHASE1:Hg19::chr9:134610968..134610980,-: Difference between revisions
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|id=chr9:134610968..134610980,-
|short_description=p@chr9:134610968..134610980,-
|description=CAGE_peak_at_chr9:134610968..134610980,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:134610968..134610980,- | |||
|coexpression_cluster_id=C2691 | |||
|description=CAGE_peak_at_chr9:134610968..134610980,- | |||
|id=chr9:134610968..134610980,- | |||
|ontology_enrichment_celltype=CL:0002057!4.50e-32!42;CL:0000860!1.39e-29!45;CL:0000738!2.89e-28!140;CL:0002009!8.51e-28!65;CL:0000557!3.11e-27!71;CL:0002194!3.31e-26!63;CL:0000576!3.31e-26!63;CL:0000040!3.31e-26!63;CL:0000559!3.31e-26!63;CL:0000839!3.13e-25!70;CL:0000766!8.83e-23!76;CL:0002087!9.63e-23!119;CL:0002031!1.32e-21!124;CL:0000037!2.25e-21!172;CL:0000566!2.25e-21!172;CL:0000763!7.46e-20!112;CL:0000049!7.46e-20!112;CL:0000988!1.02e-19!182;CL:0002032!2.33e-18!165;CL:0000837!2.33e-18!165;CL:0000451!9.81e-17!10;CL:0000990!2.20e-15!8;CL:0000453!3.89e-13!5;CL:0002320!6.42e-08!365;CL:0000134!1.33e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000453;5.98e-33;5!CL:0000860;2.63e-31;33!CL:0002057;2.63e-31;33!CL:0000473;1.84e-21;39!CL:0000234;1.84e-21;39!CL:0000990;1.17e-18;8!CL:0000451;2.15e-15;10!CL:0000576;2.43e-15;48!CL:0000766;1.58e-11;69!CL:0001014;2.99e-10;2!CL:0001016;2.99e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,4.81e-33,5;CL:0000860,5.92e-27,42;CL:0002057,5.92e-27,42;CL:0000473,1.51e-23,48;CL:0000234,1.51e-23,48;CL:0002009,6.30e-23,61;CL:0000557,7.28e-21,67;CL:0000763,2.30e-19,108;CL:0000049,2.30e-19,108;CL:0002194,9.11e-19,59;CL:0000576,9.11e-19,59;CL:0000040,9.11e-19,59;CL:0000559,9.11e-19,59;CL:0000990,1.04e-18,8;CL:0000839,9.13e-17,66;CL:0000451,1.94e-15,10;CL:0000766,2.36e-15,72;CL:0000738,2.78e-15,136;CL:0002032,8.04e-13,161;CL:0000837,8.04e-13,161;CL:0000037,2.92e-12,168;CL:0000988,1.32e-11,177;CL:0002031,1.73e-11,120;CL:0001014,2.99e-10,2;CL:0001016,2.99e-10,2;CL:0002087,1.75e-09,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.02e-21;42!CL:0000049;3.59e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.73e-23!80;UBERON:0002390!4.21e-22!102;UBERON:0003061!4.21e-22!102;UBERON:0001474!2.01e-21!86;UBERON:0002405!2.35e-20!115;UBERON:0002193!1.61e-19!112;UBERON:0004765!2.45e-17!101;UBERON:0001434!2.45e-17!101;UBERON:0002204!5.67e-10!167;UBERON:0003081!1.81e-08!216;UBERON:0002384!1.82e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.27e-18,76;UBERON:0001474,5.26e-17,82;UBERON:0004765,1.83e-15,90;UBERON:0002405,5.92e-15,93;UBERON:0002390,3.59e-14,98;UBERON:0003061,3.59e-14,98;UBERON:0001434,7.03e-14,100;UBERON:0002193,8.09e-13,108;UBERON:0002204,4.33e-08,167 | |||
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| ||
|short_description=p@chr9:134610968..134610980,- | |||
}} | }} |
Latest revision as of 23:45, 31 July 2015
Short description: | p@chr9:134610968..134610980, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:134610968..134610980, - |
Coexpression cluster: | C2691_migratory_CD14_splenic_myelodysplastic_immature_acute_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 4.81e-33 | 5 |
classical monocyte | 5.92e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.92e-27 | 42 |
defensive cell | 1.51e-23 | 48 |
phagocyte | 1.51e-23 | 48 |
macrophage dendritic cell progenitor | 6.30e-23 | 61 |
granulocyte monocyte progenitor cell | 7.28e-21 | 67 |
myeloid cell | 2.30e-19 | 108 |
common myeloid progenitor | 2.30e-19 | 108 |
monopoietic cell | 9.11e-19 | 59 |
monocyte | 9.11e-19 | 59 |
monoblast | 9.11e-19 | 59 |
promonocyte | 9.11e-19 | 59 |
conventional dendritic cell | 1.04e-18 | 8 |
myeloid lineage restricted progenitor cell | 9.13e-17 | 66 |
dendritic cell | 1.94e-15 | 10 |
myeloid leukocyte | 2.36e-15 | 72 |
leukocyte | 2.78e-15 | 136 |
hematopoietic oligopotent progenitor cell | 8.04e-13 | 161 |
hematopoietic multipotent progenitor cell | 8.04e-13 | 161 |
hematopoietic stem cell | 2.92e-12 | 168 |
hematopoietic cell | 1.32e-11 | 177 |
hematopoietic lineage restricted progenitor cell | 1.73e-11 | 120 |
CD1a-positive Langerhans cell | 2.99e-10 | 2 |
immature CD1a-positive Langerhans cell | 2.99e-10 | 2 |
nongranular leukocyte | 1.75e-09 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.27e-18 | 76 |
bone element | 5.26e-17 | 82 |
skeletal element | 1.83e-15 | 90 |
immune system | 5.92e-15 | 93 |
hematopoietic system | 3.59e-14 | 98 |
blood island | 3.59e-14 | 98 |
skeletal system | 7.03e-14 | 100 |
hemolymphoid system | 8.09e-13 | 108 |
musculoskeletal system | 4.33e-08 | 167 |