FFCP PHASE1:Hg19::chr9:134151886..134151907,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:134151886..134151907,-
|short_description=p3@FAM78A
|description=CAGE_peak_3_at_FAM78A_5end
|association_with_transcript=0bp_to_NM_033387,uc004cak.2_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=286336 | |EntrezGene=286336 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25465 | |HGNC=25465 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JUQ0,Q8N2W3 | |UniProt=Q5JUQ0,Q8N2W3 | ||
|association_with_transcript=0bp_to_NM_033387,uc004cak.2_5end | |||
|cluster_id=chr9:134151886..134151907,- | |||
|description=CAGE_peak_3_at_FAM78A_5end | |||
|id=chr9:134151886..134151907,- | |||
|ontology_enrichment_celltype=CL:0000037!1.85e-65!172;CL:0000566!1.85e-65!172;CL:0002032!1.11e-61!165;CL:0000837!1.11e-61!165;CL:0000988!1.66e-61!182;CL:0002087!1.49e-57!119;CL:0000738!7.91e-56!140;CL:0002031!4.46e-48!124;CL:0000763!2.07e-32!112;CL:0000049!2.07e-32!112;CL:0002194!1.09e-26!63;CL:0000576!1.09e-26!63;CL:0000040!1.09e-26!63;CL:0000559!1.09e-26!63;CL:0000542!1.31e-26!53;CL:0000051!1.31e-26!53;CL:0000766!2.49e-26!76;CL:0000838!3.75e-26!52;CL:0002009!3.57e-25!65;CL:0000839!1.60e-22!70;CL:0000557!6.79e-22!71;CL:0002057!2.67e-20!42;CL:0000860!6.83e-18!45;CL:0000084!6.81e-15!25;CL:0000827!6.81e-15!25;CL:0000791!2.90e-13!18;CL:0000789!2.90e-13!18;CL:0002420!2.90e-13!18;CL:0002419!2.90e-13!18;CL:0000790!2.90e-13!18;CL:0000134!1.04e-10!358;CL:0000945!1.92e-10!24;CL:0000826!1.92e-10!24;CL:0002320!9.88e-10!365;CL:0000625!7.55e-09!11;CL:0000219!1.36e-08!390;CL:0000236!1.01e-07!14;CL:0002393!2.52e-07!9;CL:0002397!2.52e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000576;2.42e-19;48!CL:0000473;3.98e-17;39!CL:0000234;3.98e-17;39!CL:0000791;6.57e-17;18!CL:0000789;6.57e-17;18!CL:0002419;6.57e-17;18!CL:0002087;4.93e-16;104!CL:0000542;1.23e-15;53!CL:0000084;5.32e-15;25!CL:0000766;3.23e-14;69!CL:0000860;1.59e-13;33!CL:0002057;1.59e-13;33!CL:0000738;1.94e-13;136!CL:0000763;1.98e-12;100!CL:0000988;2.15e-11;177!CL:0000625;2.22e-10;11!CL:0000235;9.34e-09;6!CL:0000945;1.23e-08;24!CL:0000236;5.24e-08;13!CL:0000624;1.38e-07;6!CL:0002393;1.68e-07;6!CL:0002397;1.68e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.12e-72,168;CL:0002087,2.39e-68,115;CL:0002032,9.39e-68,161;CL:0000837,9.39e-68,161;CL:0000988,1.64e-66,177;CL:0000738,3.97e-65,136;CL:0002031,6.57e-57,120;CL:0000763,1.84e-38,108;CL:0000049,1.84e-38,108;CL:0002194,4.43e-37,59;CL:0000576,4.43e-37,59;CL:0000040,4.43e-37,59;CL:0000559,4.43e-37,59;CL:0000766,8.37e-36,72;CL:0002009,2.51e-35,61;CL:0000839,2.03e-31,66;CL:0000557,1.04e-30,67;CL:0000473,5.65e-29,48;CL:0000234,5.65e-29,48;CL:0000542,1.24e-25,53;CL:0000051,1.24e-25,53;CL:0000838,5.53e-25,52;CL:0000860,1.66e-22,42;CL:0002057,1.66e-22,42;CL:0000134,6.34e-19,354;CL:0002320,6.41e-18,361;CL:0000791,4.15e-17,18;CL:0000789,4.15e-17,18;CL:0002420,4.15e-17,18;CL:0002419,4.15e-17,18;CL:0000790,4.15e-17,18;CL:0000219,1.65e-16,386;CL:0000084,4.78e-15,25;CL:0000827,4.78e-15,25;CL:0000625,1.35e-10,11;CL:0000048,2.48e-10,427;CL:0002393,4.36e-10,9;CL:0002397,4.36e-10,9;CL:0000723,8.74e-10,433;CL:0000034,4.37e-09,441;CL:0000945,1.08e-08,24;CL:0000826,1.08e-08,24;CL:0000235,1.39e-08,6;CL:0000624,1.72e-07,6;CL:0000236,2.29e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;6.57e-17;18!CL:0002057;3.61e-16;42!CL:0000051;1.23e-15;53!CL:0000049;2.84e-12;108 | |||
|ontology_enrichment_disease=DOID:1240!1.67e-13!39;DOID:2531!1.84e-12!51;DOID:0060083!1.84e-12!51;DOID:8692!3.45e-11!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.30e-09;31!DOID:1240;2.86e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.06e-10,39;DOID:8692,3.35e-10,31;DOID:2531,7.65e-10,51;DOID:0060083,7.65e-10,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.82e-28!102;UBERON:0003061!1.82e-28!102;UBERON:0002193!5.28e-26!112;UBERON:0002371!8.55e-18!80;UBERON:0001474!4.07e-15!86;UBERON:0002405!4.13e-15!115;UBERON:0004765!4.54e-10!101;UBERON:0001434!4.54e-10!101;UBERON:0000178!5.65e-10!15;UBERON:0000179!5.65e-10!15;UBERON:0000463!5.65e-10!15;UBERON:0007023!6.11e-10!115;UBERON:0002384!9.28e-09!375;UBERON:0003081!1.45e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.69e-12;15!UBERON:0000179;8.69e-12;15!UBERON:0000463;8.69e-12;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.26e-39,98;UBERON:0003061,1.26e-39,98;UBERON:0002193,1.47e-36,108;UBERON:0002405,1.58e-26,93;UBERON:0002371,3.50e-25,76;UBERON:0001474,3.37e-22,82;UBERON:0004765,7.15e-19,90;UBERON:0002384,1.47e-16,371;UBERON:0001434,1.63e-15,100;UBERON:0003081,1.22e-13,203;UBERON:0000178,8.81e-12,15;UBERON:0000179,8.81e-12,15;UBERON:0000463,8.81e-12,15 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22261449196722,0.985207073399349,1.02324015707783,3.14691421479123,6.52509976765262,7.89562228911988,0,0,0,1.08454080812422,1.84820002233648,0.587200878669695,5.53995408531877,2.4065333696417,3.68918480216948,11.4196891862361,11.3362783106643,11.3333249759042,13.5220362064995,13.6035339727971,16.0105480383959,2.09186133215116,2.05583944010913,1.85823822537062,1.43846196161075,1.2808035326455,0.709446689665756,0.344745680736619,3.22742341791913,0,6.02375486536335,4.91231070104122,0.898893937780338,1.53041946185451,2.56743221660875,0,1.9791078011203,3.59034583718937,2.98357325372886,1.45104619314292,0,2.4912889959823,1.25624332628372,1.5644487552606,1.52032191293582,0.605399502633369,0.368277635987565,0.632924774881769,3.16882929467913,4.889898899196,2.93522103711726,3.70684482783434,6.30742949934327,6.10757229448904,2.28010194992999,2.78483348078726,2.55729815270488,3.51992488922645,3.82297027883492,2.66852776159066,2.56038133539904,5.20514783146816,2.29900975981793,4.62731410949403,0.954053754535364,2.84606484554724,4.11066032559657,3.44045905312706,0,0.560508562981536,0.790152254325231,3.73748563216283,4.32311839024081,4.5232329779892,5.18278135711102,3.2592226663359,5.6813736688168,5.84480185223734,4.79064964606246,2.3568472597987,3.76607620792156,4.33286182024025,6.53265730600943,6.24284868287415,4.93313713811028,5.80335037350282,1.73881851441031,3.70716407905151,5.61835738988397,6.27213142829861,3.51258962362455,3.06576394881537,1.37450978193052,3.28925599625354,4.14135038621326,1.95325036156926,0.950452044448374,4.9689789295665,4.8634912238679,2.49861453104692,5.44587679701239,1.64225599384209,4.43534835094411,6.68600489458768,5.64815175142916,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,3.8945687238562,3.30846500868608,2.12732736830184,4.29283123749616,4.0039643754609,1.85728750664782,0.39752481473341,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,1.3394959242612,0.22452937262617,0.675668882899933,0,2.84779697870439,1.09921046358244,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,2.21446636387394,1.40241773803446,0,0,0,0.982827216677626,1.18157981336281,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.40164215827233,4.21207677250628,5.20209068010549,0,0,0,0,0,0,0,0,0,0.144119953416961,0,2.47641787739459,1.14596527667483,2.34434894420094,0,1.33675740514321,0.600686115687835,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.162378064119,10.0451418286425,2.10833939483032,0,0,0,0,0,0,1.68127715990291,4.92576900504818,3.23441362289276,4.62034930607094,0,0,0,0.335032530668698,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.58273670531796,5.60856922128404,4.802740101155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27466768141793,0.510281115829547,2.37507507712353,4.62681758070868,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,4.05958087385735,5.35246044999663,7.40541343326411,5.71756261098694,3.70226045777575,5.83625980073446,8.10047155857172,7.13812658664843,0,0,0,1.48642540100575,0.144269212976445,0.569134746787313,0.159426272728822,1.59663497146253,3.06408592211787,3.81012448902989,1.29848776109822,1.68478306868075,1.59764275323235,2.50687833236837,2.50634477090067,2.20079311142084,2.72999727676289,3.02699560786571,2.12923118845163,2.40453741329035,1.53620382154229,2.46043718681657,2.0021897005429,2.9308214310306,0,0,1.35227839237992,0.33307196799782,0,0,0.879049075631364,0,0.111443384277478,0,0.23874448473769,0.296964680832639,0,0,0.562677665642051,0,0.659215496907038,0,0.597743964753209,3.03912307084262,0,0,0.369254416383208,0,0,0,2.55786185113436,0.0986434056369336,2.3948309234694,0,0.969332746095218,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.0769502585037971,0,0.922255617552241,0.448788222048861,0.217294743844016,1.27600463892768,0.641183153813036,1.5991043280559,3.06579894587209,2.5116841023204,2.16075186470203,0.451191321234361,0.19606253431774,0.167821586975843,0.189753732724185,0.635746315921515,0,0,0,0,0,0.176915129006678,0,0,0.247127877893006,0.417687798021821,0.539209063845416,0,1.87411556580271,0,0,0,0,1.20990716048664,0,2.33790344625405,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0.126621591911757,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.684526894459965,0,0,1.31443677139657,0,0,0,0,2.14613024068285,0,0.671834724867263,0,0,0,0,0,0,0.677386656526276,0,0.272406812223151,0,0,0,0,0,0.242998226632099,0,0.551639951094387,0.209818352539992,0,0,0,0.714695326373367,0,0,0,0,0,0,0.656740165994712,0,0,0.732761168390412,0,0,0.6611630087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| ||
|short_description=p3@FAM78A | |||
}} | }} |
Latest revision as of 02:21, 16 September 2015
Short description: | p3@FAM78A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FAM78A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_033387, uc004cak.2_5end |
EntrezGene: | FAM78A |
HGNC: | 25465 |
UniProt: | Q5JUQ0Q8N2W3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.26e-39 | 98 |
blood island | 1.26e-39 | 98 |
hemolymphoid system | 1.47e-36 | 108 |
immune system | 1.58e-26 | 93 |
bone marrow | 3.50e-25 | 76 |
bone element | 3.37e-22 | 82 |
skeletal element | 7.15e-19 | 90 |
connective tissue | 1.47e-16 | 371 |
skeletal system | 1.63e-15 | 100 |
lateral plate mesoderm | 1.22e-13 | 203 |
blood | 8.81e-12 | 15 |
haemolymphatic fluid | 8.81e-12 | 15 |
organism substance | 8.81e-12 | 15 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.06e-10 | 39 |
myeloid leukemia | 3.35e-10 | 31 |
hematologic cancer | 7.65e-10 | 51 |
immune system cancer | 7.65e-10 | 51 |