FFCP PHASE1:Hg19::chr2:163200618..163200667,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25801 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15990 | |||
|TSSclassifier=strong | |||
|UniProt=C9JIZ3 | |||
|association_with_transcript=0bp_to_ENST00000453113,ENST00000481161_5end | |||
|cluster_id=chr2:163200618..163200667,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_GCA_5end | |||
|id=chr2:163200618..163200667,+ | |||
|ontology_enrichment_celltype=CL:0000766!6.49e-28!76;CL:0000763!1.14e-27!112;CL:0000049!1.14e-27!112;CL:0000037!1.04e-26!172;CL:0000566!1.04e-26!172;CL:0002032!9.33e-26!165;CL:0000837!9.33e-26!165;CL:0002057!1.08e-25!42;CL:0000738!1.82e-25!140;CL:0000557!2.23e-24!71;CL:0002009!2.68e-24!65;CL:0000988!5.20e-24!182;CL:0002194!1.68e-23!63;CL:0000576!1.68e-23!63;CL:0000040!1.68e-23!63;CL:0000559!1.68e-23!63;CL:0000839!2.95e-23!70;CL:0000860!3.81e-21!45;CL:0002087!1.45e-20!119;CL:0002031!1.58e-20!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.04e-19;33!CL:0002057;3.04e-19;33!CL:0000473;1.91e-18;39!CL:0000234;1.91e-18;39!CL:0000576;3.83e-17;48!CL:0000766;3.29e-14;69!CL:0000763;3.46e-10;100!CL:0002087;9.93e-08;104!CL:0000738;1.07e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.17e-33,72;CL:0000763,1.11e-31,108;CL:0000049,1.11e-31,108;CL:0000037,8.26e-30,168;CL:0002009,2.86e-29,61;CL:0000557,4.55e-29,67;CL:0002032,8.25e-29,161;CL:0000837,8.25e-29,161;CL:0000738,1.20e-28,136;CL:0002194,1.80e-28,59;CL:0000576,1.80e-28,59;CL:0000040,1.80e-28,59;CL:0000559,1.80e-28,59;CL:0000473,2.13e-28,48;CL:0000234,2.13e-28,48;CL:0000839,7.56e-28,66;CL:0000988,3.62e-27,177;CL:0000860,1.00e-25,42;CL:0002057,1.00e-25,42;CL:0002087,1.40e-23,115;CL:0002031,1.82e-23,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.08e-18;42!CL:0000049;1.82e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.15e-27!115;UBERON:0002390!1.91e-25!102;UBERON:0003061!1.91e-25!102;UBERON:0002193!3.41e-22!112;UBERON:0002371!8.41e-20!80;UBERON:0001049!1.11e-16!57;UBERON:0005068!1.11e-16!57;UBERON:0006241!1.11e-16!57;UBERON:0007135!1.11e-16!57;UBERON:0001474!2.85e-16!86;UBERON:0002405!2.41e-15!115;UBERON:0005743!8.44e-15!86;UBERON:0002780!3.54e-14!41;UBERON:0001890!3.54e-14!41;UBERON:0006240!3.54e-14!41;UBERON:0003080!3.58e-14!42;UBERON:0001017!9.07e-14!82;UBERON:0002616!4.00e-13!59;UBERON:0003075!1.92e-12!86;UBERON:0007284!1.92e-12!86;UBERON:0002020!8.57e-12!34;UBERON:0003528!8.57e-12!34;UBERON:0001893!1.27e-11!34;UBERON:0004765!1.49e-11!101;UBERON:0001434!1.49e-11!101;UBERON:0000073!1.82e-11!94;UBERON:0001016!1.82e-11!94;UBERON:0002346!2.13e-11!90;UBERON:0002791!2.49e-11!33;UBERON:0001869!8.49e-11!32;UBERON:0000955!2.60e-10!69;UBERON:0006238!2.60e-10!69;UBERON:0003056!3.72e-10!61;UBERON:0000956!1.75e-08!25;UBERON:0000203!1.75e-08!25;UBERON:0002619!4.66e-08!22;UBERON:0001950!2.73e-07!20;UBERON:0000178!4.82e-07!15;UBERON:0000179!4.82e-07!15;UBERON:0000463!4.82e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.15e-10;41!UBERON:0001890;2.15e-10;41!UBERON:0003528;3.32e-10;34!UBERON:0002020;3.32e-10;34!UBERON:0001893;3.76e-10;34!UBERON:0002791;4.71e-10;32!UBERON:0001869;6.21e-10;32!UBERON:0000073;2.39e-09;53!UBERON:0002616;2.39e-09;53!UBERON:0000956;1.75e-08;25!UBERON:0000203;1.75e-08;25!UBERON:0002619;4.49e-08;22!UBERON:0007023;9.56e-08;114!UBERON:0001950;2.63e-07;20!UBERON:0000178;4.58e-07;15!UBERON:0000179;4.58e-07;15!UBERON:0000463;4.58e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.94e-29,98;UBERON:0003061,2.94e-29,98;UBERON:0007023,1.21e-26,114;UBERON:0002193,1.86e-25,108;UBERON:0002371,1.40e-23,76;UBERON:0002405,1.15e-19,93;UBERON:0001474,2.01e-19,82;UBERON:0001049,1.10e-16,56;UBERON:0005068,1.10e-16,56;UBERON:0006241,1.10e-16,56;UBERON:0007135,1.10e-16,56;UBERON:0004765,2.12e-16,90;UBERON:0000073,1.67e-15,53;UBERON:0002616,1.67e-15,53;UBERON:0002780,3.41e-14,41;UBERON:0001890,3.41e-14,41;UBERON:0003080,3.41e-14,41;UBERON:0006240,3.41e-14,41;UBERON:0001017,9.12e-14,81;UBERON:0001434,5.72e-13,100;UBERON:0003528,8.31e-12,34;UBERON:0002020,8.31e-12,34;UBERON:0003075,9.20e-12,82;UBERON:0007284,9.20e-12,82;UBERON:0001893,1.23e-11,34;UBERON:0002791,5.41e-11,32;UBERON:0001869,8.25e-11,32;UBERON:0002346,9.10e-11,86;UBERON:0003056,1.43e-10,61;UBERON:0001016,1.71e-10,89;UBERON:0000955,2.68e-10,68;UBERON:0006238,2.68e-10,68;UBERON:0000956,1.71e-08,25;UBERON:0000203,1.71e-08,25;UBERON:0002619,4.57e-08,22;UBERON:0001950,2.68e-07,20;UBERON:0000178,4.73e-07,15;UBERON:0000179,4.73e-07,15;UBERON:0000463,4.73e-07,15;UBERON:0010371,5.09e-07,104 | |||
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| |||
|short_description=p1@GCA | |||
}} |
Latest revision as of 21:57, 17 September 2015
Short description: | p1@GCA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GCA_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000453113, ENST00000481161_5end |
EntrezGene: | GCA |
HGNC: | 15990 |
UniProt: | C9JIZ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 8.17e-33 | 72 |
myeloid cell | 1.11e-31 | 108 |
common myeloid progenitor | 1.11e-31 | 108 |
hematopoietic stem cell | 8.26e-30 | 168 |
macrophage dendritic cell progenitor | 2.86e-29 | 61 |
granulocyte monocyte progenitor cell | 4.55e-29 | 67 |
hematopoietic oligopotent progenitor cell | 8.25e-29 | 161 |
hematopoietic multipotent progenitor cell | 8.25e-29 | 161 |
leukocyte | 1.20e-28 | 136 |
monopoietic cell | 1.80e-28 | 59 |
monocyte | 1.80e-28 | 59 |
monoblast | 1.80e-28 | 59 |
promonocyte | 1.80e-28 | 59 |
defensive cell | 2.13e-28 | 48 |
phagocyte | 2.13e-28 | 48 |
myeloid lineage restricted progenitor cell | 7.56e-28 | 66 |
hematopoietic cell | 3.62e-27 | 177 |
classical monocyte | 1.00e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.00e-25 | 42 |
nongranular leukocyte | 1.40e-23 | 115 |
hematopoietic lineage restricted progenitor cell | 1.82e-23 | 120 |