FFCP PHASE1:Hg19::chr22:50746027..50746082,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23654 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9104 | |||
|TSSclassifier=strong | |||
|UniProt=A6QRH1,O15031 | |||
|association_with_transcript=0bp_to_ENST00000425954,ENST00000449103_5end | |||
|cluster_id=chr22:50746027..50746082,- | |||
|description=CAGE_peak_1_at_PLXNB2_5end | |||
|id=chr22:50746027..50746082,- | |||
|ontology_enrichment_celltype=CL:0002371!5.25e-20!591;CL:0000144!3.78e-18!625;CL:0000548!7.17e-16!679;CL:0000004!7.17e-16!679;CL:0000255!7.17e-16!679;CL:0002057!1.24e-15!42;CL:0002194!4.04e-15!63;CL:0000576!4.04e-15!63;CL:0000040!4.04e-15!63;CL:0000559!4.04e-15!63;CL:0000012!5.45e-15!682;CL:0002009!3.61e-14!65;CL:0000860!3.85e-13!45;CL:0000557!7.10e-11!71;CL:0000839!3.98e-10!70;CL:0000766!1.16e-08!76;CL:0000055!1.62e-08!180;CL:0000063!1.79e-08!578;CL:1000497!3.46e-07!18;CL:0002518!3.46e-07!18;CL:0000183!4.08e-07!59;CL:1000449!9.55e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.24e-10;33!CL:0002057;3.24e-10;33!CL:0000576;6.17e-10;48!CL:0000473;6.39e-10;39!CL:0000234;6.39e-10;39!CL:1000497;4.07e-07;17!CL:0002518;4.07e-07;17!CL:1000507;9.46e-07;10!CL:1000494;9.46e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,4.36e-17,59;CL:0000576,4.36e-17,59;CL:0000040,4.36e-17,59;CL:0000559,4.36e-17,59;CL:0000473,8.07e-17,48;CL:0000234,8.07e-17,48;CL:0002009,5.41e-16,61;CL:0000860,1.24e-15,42;CL:0002057,1.24e-15,42;CL:0000557,3.04e-12,67;CL:0000839,2.04e-11,66;CL:0000766,8.86e-10,72;CL:1000497,4.31e-07,17;CL:0002518,4.31e-07,17;CL:0000723,7.93e-07,433;CL:0000057,8.86e-07,76;CL:0000048,9.01e-07,427;CL:1000507,9.43e-07,10;CL:1000494,9.43e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;2.26e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!5.21e-16!448;UBERON:0004120!5.21e-16!448;UBERON:0006603!5.21e-16!448;UBERON:0000468!3.05e-15!659;UBERON:0002204!1.33e-14!167;UBERON:0000467!3.66e-14!625;UBERON:0003081!5.31e-14!216;UBERON:0000480!5.68e-14!626;UBERON:0000062!8.89e-12!511;UBERON:0002050!6.31e-11!605;UBERON:0005423!6.31e-11!605;UBERON:0002371!8.77e-11!80;UBERON:0000923!1.18e-10!604;UBERON:0005291!1.18e-10!604;UBERON:0006598!1.18e-10!604;UBERON:0002532!1.18e-10!604;UBERON:0001474!6.95e-10!86;UBERON:0000922!7.30e-10!612;UBERON:0004765!2.11e-09!101;UBERON:0001434!2.11e-09!101;UBERON:0005256!2.42e-08!143;UBERON:0002100!5.21e-08!216;UBERON:0002405!1.05e-07!115;UBERON:0006554!2.63e-07!44;UBERON:0001008!4.60e-07!45;UBERON:0003887!6.03e-07!21;UBERON:0009569!6.21e-07!113;UBERON:0002417!6.21e-07!61;UBERON:0000916!6.21e-07!61;UBERON:0000080!9.17e-07!18;UBERON:0002120!9.17e-07!18;UBERON:0004875!9.17e-07!18;UBERON:0005721!9.17e-07!18;UBERON:0005754!9.17e-07!18;UBERON:0007297!9.17e-07!18;UBERON:0006555!9.39e-07!17;UBERON:0005103!9.39e-07!17;UBERON:0000083!9.39e-07!17;UBERON:0009201!9.39e-07!17;UBERON:0004819!9.39e-07!17;UBERON:0006553!9.39e-07!17;UBERON:0003074!9.39e-07!17;UBERON:0003060!9.39e-07!17;UBERON:0004211!9.55e-07!16;UBERON:0001285!9.55e-07!16;UBERON:0007684!9.55e-07!16;UBERON:0003220!9.55e-07!16;UBERON:0004208!9.55e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;5.96e-07;30!UBERON:0001008;5.96e-07;30!UBERON:0004211;9.46e-07;10!UBERON:0009773;9.46e-07;10!UBERON:0001231;9.46e-07;10!UBERON:0004810;9.46e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,7.02e-17,315;UBERON:0004120,7.02e-17,315;UBERON:0006603,7.02e-17,315;UBERON:0002204,2.93e-16,167;UBERON:0002371,4.99e-12,76;UBERON:0003081,5.22e-12,203;UBERON:0004765,1.44e-11,90;UBERON:0005423,1.94e-11,581;UBERON:0001474,5.45e-11,82;UBERON:0001434,7.23e-11,100;UBERON:0000922,8.42e-10,592;UBERON:0002405,4.48e-09,93;UBERON:0002050,1.19e-08,564;UBERON:0006554,1.91e-08,47;UBERON:0002100,2.15e-08,199;UBERON:0000923,2.36e-08,560;UBERON:0010316,2.36e-08,560;UBERON:0005291,2.36e-08,560;UBERON:0006598,2.36e-08,560;UBERON:0010317,2.36e-08,560;UBERON:0002532,2.36e-08,560;UBERON:0001008,3.51e-08,48;UBERON:0003104,3.61e-08,160;UBERON:0009142,3.61e-08,160;UBERON:0002390,5.32e-07,98;UBERON:0003061,5.32e-07,98;UBERON:0009569,7.80e-07,112;UBERON:0002417,8.52e-07,60;UBERON:0000916,8.52e-07,60;UBERON:0004810,9.43e-07,10 | |||
|phase1_expression=70.1278543984349,57.1648398788925,77.1020590404962,45.0329842589087,55.4231757089837,67.1700663557284,37.9949817252466,29.0591141776342,43.617999909373,71.2628415854376,206.549145719839,54.8287844046732,89.9445395759027,48.2688776544182,50.3724011106432,49.0797356909796,47.6128677138942,51.1217063271161,51.2329438730032,42.969249268799,69.9722370967788,72.7214953829164,24.0438229190088,30.3861223661803,25.9873263961242,24.6815300565883,22.9060644565349,23.2983912688491,59.7913700810334,31.4740106439714,72.2991295886075,33.0991640812414,53.3134476237503,66.5557218300218,17.1202513282467,11.800046296456,9.10161361938026,75.8973709688672,114.310335057981,82.4641308720237,49.0374888585434,34.3327285980118,36.5757306040545,97.7076164598675,85.7778392173597,104.553730371949,88.7878920979715,68.6650372996449,74.3295290148249,44.8800132022555,48.414373534,48.7153393570486,49.9881237068097,57.4481368389605,62.2961838333972,90.9210499990781,72.3201297653291,55.0572536890457,63.0532818284059,58.0881539007729,67.7697353346984,51.7866541293144,61.0358792322194,77.999129347483,64.1362417369171,43.1212770765266,60.4137581525708,62.3096689836723,78.2224377630302,54.2972111762792,44.7995631948693,50.8223137662839,50.9504443779824,93.7973471225022,126.712162779166,69.3970116632724,93.2327638515909,92.8093197760509,81.0056956953284,84.0787594036683,101.447505371536,81.6508767327914,0,1.63841583378639,0,2.13365111283254,0.400395987036012,0.574752439954483,2.64417949113945,0,1.1384259382189,4.11066032559657,1.52909291250092,5.28685314316103,13.4522055115569,8.16490662802739,0.393419540227666,1.17903228824749,1.64481199199607,3.00935691703221,0,0,0,3.67654507721073,0,0,0,6.14838334683241,10.0145697621106,1.47994114143309,3.03985019564433,0.869409257205157,0,0,0,2.94604291013672,0,0.34362744548263,0,1.27426165729639,0,0,4.36667845325541,1.79181255616186,2.49861453104692,4.02521328474829,0.821127996921047,0,0,0.144824403882799,68.2659225679093,49.6318636180691,38.8702188004332,42.6498199813788,57.6538597231273,52.579286382779,13.5198610998687,57.9095495660137,41.2171802835336,51.2194908138523,46.4646016316637,46.039145037446,88.5237550550877,68.9659063579039,47.3839194735838,58.5075917325538,89.3477494686774,67.7313373027171,58.343480899573,50.8896776821504,18.2861414777369,12.0432843314857,28.8126616334303,23.1776256188844,25.5894656088043,21.1840892293852,17.9735671221657,26.8753429536102,20.6344432358292,20.7526779914096,33.4348333200592,24.3287073829924,50.7649079700193,12.5005447317595,43.747665185615,16.5204497325548,13.9208211028225,14.3016580213819,24.5306619945413,32.2750324253164,24.1826301988138,0,0,103.354290357781,62.6184659136101,47.1065503392237,44.4894847532415,139.689434304672,44.688216156993,48.7789512123807,44.8345782064761,71.0402539441421,34.2332138939743,32.4652719687948,31.711609204011,46.315372859349,43.7893702604799,46.1613220712579,24.348485992765,12.5503800739779,34.2237478463624,19.3766922762212,14.8923108818681,11.3765153428821,28.3774298044302,22.1101771161182,35.4407429432875,66.528160007795,61.0749315318035,58.2503271640337,211.99235183579,21.3786864721664,31.9052225673509,16.0697186980826,30.7284334616587,54.8613154480245,66.8559362134356,36.1848664280467,84.1337391380763,72.3959548094944,44.505699243508,122.437167202436,48.2285836835894,81.6720511944644,61.4185625894246,95.5274040485567,47.7441325289873,61.5938409155639,72.4432702314896,52.373322409295,98.3376571271022,36.1700032637229,45.7813599238317,43.4836919617418,41.184664209216,37.2845974005705,5.00092195131341,5.03613119621644,7.55260628651869,18.0370235726745,7.0649838245176,5.83963774521328,46.9348596989448,69.4700213248316,66.3047622491907,45.9724248751659,48.3659252718622,16.4446452055383,19.0500699788255,14.4606617930089,16.5440959098591,14.8158021982836,11.8635309555548,11.460661193614,14.716609884401,13.8508976500701,30.2643736396106,81.3402288059986,97.9546146968732,174.940366548795,30.4212083572394,31.450470933684,11.8157981336281,0,22.2609073763036,35.5145367317948,45.436618159171,52.8288240310812,26.4391197442589,48.7941105985451,34.5356803628944,49.9168696934198,46.1860294480874,30.0259748885449,51.4250080752899,29.0176559999758,24.5382321665604,27.016089617313,26.0767451326561,30.9055018354154,70.4180637409956,53.5869767168854,90.0704843469693,28.1201501960331,49.7227099468624,31.0487462960826,36.7189943081678,36.3292423142452,47.5394522164862,0.492663237895943,3.08169519046291,4.76854665743776,7.63835753109896,9.72066737383126,16.0649672559188,70.2858703027231,39.853932051416,39.3466625852222,32.8019701723602,39.0445975197093,33.7275190504082,32.6301455445,33.1329652313293,32.1955074753971,66.7042053310133,178.828222925941,16.060752298564,69.4098484286512,68.6449083615016,63.0158066942248,32.625300365354,88.452163433345,68.4864589622527,67.8277006739304,81.5007933412961,15.6353368460993,45.4901694390459,18.2148930774689,85.3073437078629,67.1080763122226,114.369101912273,52.2982256757119,35.1579964002489,56.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| |||
|short_description=p1@PLXNB2 | |||
}} |
Latest revision as of 20:08, 15 September 2015
Short description: | p1@PLXNB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLXNB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000425954, ENST00000449103_5end |
EntrezGene: | PLXNB2 |
HGNC: | 9104 |
UniProt: | A6QRH1O15031 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 4.36e-17 | 59 |
monocyte | 4.36e-17 | 59 |
monoblast | 4.36e-17 | 59 |
promonocyte | 4.36e-17 | 59 |
defensive cell | 8.07e-17 | 48 |
phagocyte | 8.07e-17 | 48 |
macrophage dendritic cell progenitor | 5.41e-16 | 61 |
classical monocyte | 1.24e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.24e-15 | 42 |
granulocyte monocyte progenitor cell | 3.04e-12 | 67 |
myeloid lineage restricted progenitor cell | 2.04e-11 | 66 |
myeloid leukocyte | 8.86e-10 | 72 |
kidney cell | 4.31e-07 | 17 |
kidney epithelial cell | 4.31e-07 | 17 |
somatic stem cell | 7.93e-07 | 433 |
fibroblast | 8.86e-07 | 76 |
multi fate stem cell | 9.01e-07 | 427 |
kidney tubule cell | 9.43e-07 | 10 |
nephron tubule epithelial cell | 9.43e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 7.02e-17 | 315 |
mesoderm-derived structure | 7.02e-17 | 315 |
presumptive mesoderm | 7.02e-17 | 315 |
musculoskeletal system | 2.93e-16 | 167 |
bone marrow | 4.99e-12 | 76 |
lateral plate mesoderm | 5.22e-12 | 203 |
skeletal element | 1.44e-11 | 90 |
developing anatomical structure | 1.94e-11 | 581 |
bone element | 5.45e-11 | 82 |
skeletal system | 7.23e-11 | 100 |
embryo | 8.42e-10 | 592 |
immune system | 4.48e-09 | 93 |
embryonic structure | 1.19e-08 | 564 |
urinary system structure | 1.91e-08 | 47 |
trunk | 2.15e-08 | 199 |
germ layer | 2.36e-08 | 560 |
germ layer / neural crest | 2.36e-08 | 560 |
embryonic tissue | 2.36e-08 | 560 |
presumptive structure | 2.36e-08 | 560 |
germ layer / neural crest derived structure | 2.36e-08 | 560 |
epiblast (generic) | 2.36e-08 | 560 |
renal system | 3.51e-08 | 48 |
mesenchyme | 3.61e-08 | 160 |
entire embryonic mesenchyme | 3.61e-08 | 160 |
hematopoietic system | 5.32e-07 | 98 |
blood island | 5.32e-07 | 98 |
subdivision of trunk | 7.80e-07 | 112 |
abdominal segment of trunk | 8.52e-07 | 60 |
abdomen | 8.52e-07 | 60 |
nephron tubule epithelium | 9.43e-07 | 10 |