FFCP PHASE1:Hg19::chr22:44569007..44569025,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64098 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14654 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HBI0 | |||
|association_with_transcript=171bp_to_ENST00000422871,NM_001137605,NR_024427,uc011aqe.1_5end | |||
|cluster_id=chr22:44569007..44569025,+ | |||
|coexpression_cluster_id=C298 | |||
|description=CAGE_peak_8_at_PARVG_5end | |||
|id=chr22:44569007..44569025,+ | |||
|ontology_enrichment_celltype=CL:0000763!4.75e-36!112;CL:0000049!4.75e-36!112;CL:0002009!5.31e-35!65;CL:0002194!3.96e-34!63;CL:0000576!3.96e-34!63;CL:0000040!3.96e-34!63;CL:0000559!3.96e-34!63;CL:0000557!2.39e-33!71;CL:0000766!3.45e-30!76;CL:0000839!1.02e-29!70;CL:0000037!4.17e-24!172;CL:0000566!4.17e-24!172;CL:0000988!5.68e-22!182;CL:0002032!4.06e-21!165;CL:0000837!4.06e-21!165;CL:0002057!5.77e-19!42;CL:0000860!2.72e-17!45;CL:0002087!1.51e-16!119;CL:0000738!1.77e-16!140;CL:0002031!1.50e-14!124;CL:0000235!1.54e-08!10;CL:0002619!1.90e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.12e-36;6!CL:0002619;9.84e-20;3!CL:0000763;1.31e-12;100!CL:0000473;3.26e-08;39!CL:0000234;3.26e-08;39!CL:0002032;2.28e-07;1!CL:0000557;2.28e-07;1!CL:0000766;2.82e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.02e-36,6;CL:0000763,9.21e-33,108;CL:0000049,9.21e-33,108;CL:0002032,2.24e-20,161;CL:0000837,2.24e-20,161;CL:0002194,6.77e-20,59;CL:0000576,6.77e-20,59;CL:0000040,6.77e-20,59;CL:0000559,6.77e-20,59;CL:0000557,9.95e-20,67;CL:0002619,1.08e-19,3;CL:0000037,2.55e-19,168;CL:0002009,3.73e-19,61;CL:0000988,4.40e-18,177;CL:0000839,1.70e-17,66;CL:0000766,8.35e-16,72;CL:0002087,7.98e-09,115;CL:0002031,2.45e-08,120;CL:0000738,5.06e-07,136;CL:0000473,5.76e-07,48;CL:0000234,5.76e-07,48 | |||
|ontology_enrichment_development_v019=CL:0000049;1.21e-12;108 | |||
|ontology_enrichment_disease=DOID:8692!2.06e-10!31;DOID:1240!1.33e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.71e-29;31!DOID:1240;6.48e-20;39!DOID:2531;3.84e-10;51!DOID:0060083;3.84e-10;51!DOID:225;7.50e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.26e-30,31;DOID:1240,8.12e-24,39;DOID:2531,1.31e-17,51;DOID:0060083,1.31e-17,51;DOID:0050686,4.47e-08,137;DOID:225,7.50e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!3.41e-30!80;UBERON:0002390!5.56e-30!102;UBERON:0003061!5.56e-30!102;UBERON:0002193!9.89e-28!112;UBERON:0001474!2.49e-27!86;UBERON:0004765!2.08e-24!101;UBERON:0001434!2.08e-24!101;UBERON:0002405!1.34e-22!115;UBERON:0002204!4.41e-12!167;UBERON:0003081!5.55e-10!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.91e-17,76;UBERON:0001474,1.45e-15,82;UBERON:0004765,6.60e-14,90;UBERON:0002405,2.34e-13,93;UBERON:0002390,1.62e-12,98;UBERON:0003061,1.62e-12,98;UBERON:0001434,3.32e-12,100;UBERON:0002193,4.54e-11,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.154816123316076,0,0,0,0,0,0.293600439334847,0.553995408531877,0,0,5.37397138175818,12.9557466407592,3.09090681161024,0.145398238779565,0,0,0.232429036905685,0.822335776043652,0.309706370895104,0,0.768482119587302,0.236482229888585,0,0,1.35426486594342,0,0.272906150057846,0,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0,0,0.521482918420201,0.217188844705117,0.605399502633369,0.368277635987565,0.316462387440884,0.422510572623884,0.212604299965044,0.419317291016752,1.12328631146495,0.600707571366025,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,1.06366368415092,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95460407304877,3.27605971194933,3.71577905721821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08118903205952,2.00902836572851,4.21667878966063,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48171507906718,0,0,2.73881614839831,8.93075405906233,2.50634477090067,0,2.24823305145179,2.82519590067467,1.70338495076131,2.40453741329035,3.07240764308458,5.5919026973104,3.8375302593739,6.05703095746325,0,0,0,0,0,0,1.75809815126273,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,2.04628948090749,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17466153824464,0.157204305099666,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.70894740216682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,51.2327424982011,0,0,0.22589216407792,0,2.2644426535001,0,0,7.99539403814589,0,0,0.588925401344836,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p8@PARVG | |||
}} |
Latest revision as of 02:25, 25 September 2015
Short description: | p8@PARVG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PARVG_5end |
Coexpression cluster: | C298_small_optic_substantia_thalamus_diencephalon_globus_occipital |
Association with transcript: | 171bp_to_ENST00000422871, NM_001137605, NR_024427, uc011aqe.1_5end |
EntrezGene: | PARVG |
HGNC: | 14654 |
UniProt: | Q9HBI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.02e-36 | 6 |
myeloid cell | 9.21e-33 | 108 |
common myeloid progenitor | 9.21e-33 | 108 |
hematopoietic oligopotent progenitor cell | 2.24e-20 | 161 |
hematopoietic multipotent progenitor cell | 2.24e-20 | 161 |
monopoietic cell | 6.77e-20 | 59 |
monocyte | 6.77e-20 | 59 |
monoblast | 6.77e-20 | 59 |
promonocyte | 6.77e-20 | 59 |
granulocyte monocyte progenitor cell | 9.95e-20 | 67 |
adult endothelial progenitor cell | 1.08e-19 | 3 |
hematopoietic stem cell | 2.55e-19 | 168 |
macrophage dendritic cell progenitor | 3.73e-19 | 61 |
hematopoietic cell | 4.40e-18 | 177 |
myeloid lineage restricted progenitor cell | 1.70e-17 | 66 |
myeloid leukocyte | 8.35e-16 | 72 |
nongranular leukocyte | 7.98e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 2.45e-08 | 120 |
leukocyte | 5.06e-07 | 136 |
defensive cell | 5.76e-07 | 48 |
phagocyte | 5.76e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.91e-17 | 76 |
bone element | 1.45e-15 | 82 |
skeletal element | 6.60e-14 | 90 |
immune system | 2.34e-13 | 93 |
hematopoietic system | 1.62e-12 | 98 |
blood island | 1.62e-12 | 98 |
skeletal system | 3.32e-12 | 100 |
hemolymphoid system | 4.54e-11 | 108 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.26e-30 | 31 |
leukemia | 8.12e-24 | 39 |
hematologic cancer | 1.31e-17 | 51 |
immune system cancer | 1.31e-17 | 51 |
organ system cancer | 4.47e-08 | 137 |
syndrome | 7.50e-08 | 1 |