FFCP PHASE1:Hg19::chr9:130341532..130341536,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:130341532..130341536,-
|short_description=p10@FAM129B
|description=CAGE_peak_10_at_FAM129B_5end
|association_with_transcript=-264bp_to_ENST00000373314,NM_0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64855 | |EntrezGene=64855 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25282 | |HGNC=25282 | ||
|TSSclassifier=strong | |||
|UniProt=Q96TA1 | |UniProt=Q96TA1 | ||
|association_with_transcript=-264bp_to_ENST00000373314,NM_001035534,uc004bri.2_5end | |||
|cluster_id=chr9:130341532..130341536,- | |||
|description=CAGE_peak_10_at_FAM129B_5end | |||
|id=chr9:130341532..130341536,- | |||
|ontology_enrichment_celltype=CL:0000066!5.38e-11!254;CL:0000076!3.36e-09!62;CL:0002202!6.47e-09!9;CL:0002632!6.47e-09!9;CL:0002368!9.93e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0002328;1.29e-21;3!CL:0002202;1.97e-19;9!CL:0002632;1.97e-19;9!CL:0002368;2.10e-13;13!CL:0000307;1.86e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002328,4.06e-22,3;CL:0002202,1.10e-19,9;CL:0002632,1.10e-19,9;CL:0002368,1.41e-13,13;CL:0000068,1.96e-10,3;CL:0000069,1.96e-10,3;CL:0000307,1.96e-10,3;CL:0000377,1.96e-10,3 | |||
|ontology_enrichment_development_v019=CL:0000377;1.86e-10;3 | |||
|ontology_enrichment_disease=DOID:1749!5.30e-09!14;DOID:0050687!2.17e-07!143;DOID:305!2.30e-07!106;DOID:162!3.68e-07!235;DOID:14566!4.07e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3112;1.13e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,1.13e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.29e-21;3!UBERON:0002031;1.29e-21;3!UBERON:0002185;3.34e-13;5!UBERON:0007196;1.36e-11;15!UBERON:0001558;1.36e-11;15!UBERON:0000485;1.42e-09;7!UBERON:0000490;2.22e-07;33!UBERON:0005178;2.82e-07;34!UBERON:0002224;2.82e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,4.06e-22,3;UBERON:0002031,4.06e-22,3;UBERON:0002185,1.69e-13,5;UBERON:0007196,9.66e-12,15;UBERON:0001558,9.66e-12,15;UBERON:0000485,1.04e-07,9;UBERON:0005178,6.04e-07,34;UBERON:0002224,6.04e-07,34;UBERON:0005181,9.89e-07,35 | |||
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| ||
|short_description=p10@FAM129B | |||
}} | }} |
Latest revision as of 04:29, 25 September 2015
Short description: | p10@FAM129B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_FAM129B_5end |
Coexpression cluster: | NA |
Association with transcript: | -264bp_to_ENST00000373314, NM_001035534, uc004bri.2_5end |
EntrezGene: | FAM129B |
HGNC: | 25282 |
UniProt: | Q96TA1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial epithelial cell | 4.06e-22 | 3 |
epithelial cell of tracheobronchial tree | 1.10e-19 | 9 |
epithelial cell of lower respiratory tract | 1.10e-19 | 9 |
respiratory epithelial cell | 1.41e-13 | 13 |
duct epithelial cell | 1.96e-10 | 3 |
branched duct epithelial cell | 1.96e-10 | 3 |
tracheal epithelial cell | 1.96e-10 | 3 |
tracheoblast | 1.96e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 4.06e-22 | 3 |
epithelium of bronchus | 4.06e-22 | 3 |
bronchus | 1.69e-13 | 5 |
tracheobronchial tree | 9.66e-12 | 15 |
lower respiratory tract | 9.66e-12 | 15 |
simple columnar epithelium | 1.04e-07 | 9 |
thoracic cavity element | 6.04e-07 | 34 |
thoracic cavity | 6.04e-07 | 34 |
thoracic segment organ | 9.89e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 1.13e-08 | 1 |