FFCP PHASE1:Hg19::chr22:31478887..31478929,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6525 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11126 | |||
|TSSclassifier=strong | |||
|UniProt=B4E229,P53814 | |||
|association_with_transcript=41bp_to_NM_001207017,uc011ale.1_5end | |||
|cluster_id=chr22:31478887..31478929,+ | |||
|description=CAGE_peak_11_at_SMTN_5end | |||
|id=chr22:31478887..31478929,+ | |||
|ontology_enrichment_celltype=CL:0002620!8.26e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0000317;2.98e-16;2!CL:1000448;2.98e-16;2!CL:0002308;2.98e-16;2!CL:0002140;2.98e-16;2!CL:0002144;3.78e-11;3!CL:0002601;5.51e-09;1!CL:0000622;4.99e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,1.88e-16,2;CL:1000448,1.88e-16,2;CL:0002308,1.88e-16,2;CL:0002140,1.88e-16,2;CL:0002144,5.16e-11,3;CL:0002601,9.17e-09,1;CL:0000622,4.16e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.17e-16;2!UBERON:0004874;2.12e-09;1!UBERON:0005795;2.02e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;2.12e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,2.40e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000475!1.32e-08!365;UBERON:0002100!4.19e-08!216;UBERON:0000486!6.00e-08!82;UBERON:0007023!8.75e-08!115;UBERON:0002199!1.37e-07!45;UBERON:0002416!1.37e-07!45;UBERON:0004290!1.49e-07!70;UBERON:0002097!1.72e-07!40;UBERON:0002385!2.25e-07!63;UBERON:0001015!2.25e-07!63;UBERON:0000383!2.25e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;2.98e-16;2!UBERON:0007771;2.98e-16;2!UBERON:0003297;2.98e-16;2!UBERON:0001821;2.98e-16;2!UBERON:0003487;2.98e-16;2!UBERON:0001820;2.98e-16;2!UBERON:0010523;3.78e-11;3!UBERON:0001915;3.78e-11;3!UBERON:0001982;3.78e-11;3!UBERON:0000989;2.12e-09;1!UBERON:0008811;2.12e-09;1!UBERON:0005795;5.51e-09;1!UBERON:0006834;5.51e-09;1!UBERON:0002146;5.51e-09;1!UBERON:0005623;5.51e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,1.88e-16,2;UBERON:0007771,1.88e-16,2;UBERON:0003297,1.88e-16,2;UBERON:0001821,1.88e-16,2;UBERON:0003487,1.88e-16,2;UBERON:0001820,1.88e-16,2;UBERON:0005089,1.88e-16,2;UBERON:0005088,1.88e-16,2;UBERON:0010523,5.16e-11,3;UBERON:0001915,5.16e-11,3;UBERON:0001982,5.16e-11,3;UBERON:0000989,2.04e-09,1;UBERON:0008811,2.04e-09,1;UBERON:0006258,2.04e-09,1;UBERON:0005876,2.04e-09,1;UBERON:0004874,2.04e-09,1;UBERON:0002146,3.88e-09,1;UBERON:0005623,3.88e-09,1;UBERON:0006834,4.19e-09,1 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,1.83884244895785,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.392937226493138,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0,1.20848795132744,0.760272105718513,1.22031028774085,0,0,0.17859945656816,0,0.225222960966644,0,0,0.366403487860815,0,0,0.436094052142534,0.993943903390637,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0.298897361103602,0.23486899728753,0.161872944368132,0.140450806702248,0.408308342509787,0.122834317311768,0.309977343527296,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.358779271377724,0.213557388818567,0.211931901159562,0.300091096084402,0.206105058476878,0.772921620136887,0.37223371266318,0.337552664482532,0.194874010322397,0.252433774244115,0,0,0,0.302256294682921,0,0.193260853163297,0,0.573609190778008,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0.658501712451753,0,0.904760751704678,0.0925884451585296,0,0,0,0,0,0.577465791044295,0,0,0,0,0,0,0,0,0,0.425325291727159,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0.2933531432838,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.178428988797162,0,0.35142424497814,0.300946099727719,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0.460385919864187,0.280660094433074,0,0.511707249066704,0,0,0.616838775210622,0.355123450626254,0.0821271560138091,0,0.232420756919918,0,0.200506470303285,0.0920809889358963,0,0.182091168006717,0,0,0.15403067420883,0,0,0,2.27466768141793,0.510281115829547,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72279661398852,1.30012049207304,0,0,0,0,0,0.107420244868274,0,0.255679882248303,0.178064071293475,0.165284915360978,0,0.127612712494584,0,0,0,0.6970372701606,0.308033580176089,0.532306030317022,0,0.9266210955196,0.143124886741991,0,0.316379424718726,0,0.511795582622668,0,0,0.78494864019923,0,0.54907405947211,0,0.404364963146632,1.58510321173008,0.421258456238981,0.975267478179181,0.243713489631284,1.05650146756755,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0.202910376962704,0.6196469961995,0.281695602532241,0.143411352204052,0,0,1.06428319221179,0.211107635297664,0,0,0,0.673554789078584,0.670302275535787,1.08890984861323,0.0941438007767792,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,0,2.59022384726391,0,0.251932747854276,0,0,2.17727711363265,0.0898683511473268,0,0,1.479651084554,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0.442317039724898,0,0,0,0,0.846452843541768,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.126373159256976,0,0,0.664653872707185,0.661983911750998,0,1.19472429772959,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0.882561266915003,0.225980740780532,0.137041924646751,0,0,0,0,0.640358984218058,0,0,0,0.171594997861965,0,0.248505071130865,0,0,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,1.60412296808179,0.717873024576814,0.199679000498991,1.28767814440971,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.394028536495991,0.314727528809989,0,0,0,0,0,0.25426853765475,0.542999601753713,1.72844298240254,0.979762080328227,0,0,0.170388021785422,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0.471612915298998,0.414239055347196,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0,0,0,0.15543720058278,0,0.318593534327405,0,0,0,0.53168342911599,1.04349012362347,0,0,0.813741466409323,0.363697318405119,0,0,0.398095888698616,0,0.686791410365586,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0.567515953566836,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.128458450192919,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0.198916222116275,0.150420656698515,0,0.781514011233092,0,0,0,0.0675375846183947,0,0.206686796501184,0.126831620387814,0,0,2.48105589194647,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0.78493092850514,0,0,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0.423387050190929,0,0,0,0.111855431797792,0.196300467230486,6.09589624911347,0.647428837187895,0.205325613712494,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560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| |||
|short_description=p11@SMTN | |||
}} |
Latest revision as of 19:14, 19 September 2015
Short description: | p11@SMTN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SMTN_5end |
Coexpression cluster: | NA |
Association with transcript: | 41bp_to_NM_001207017, uc011ale.1_5end |
EntrezGene: | SMTN |
HGNC: | 11126 |
UniProt: | B4E229P53814 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 1.88e-16 | 2 |
epithelial cell of sweat gland | 1.88e-16 | 2 |
epithelial cell of skin gland | 1.88e-16 | 2 |
acinar cell of sebaceous gland | 1.88e-16 | 2 |
capillary endothelial cell | 5.16e-11 | 3 |
uterine smooth muscle cell | 9.17e-09 | 1 |
acinar cell | 4.16e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
skin gland | 1.88e-16 | 2 |
epidermis gland | 1.88e-16 | 2 |
gland of integumental system | 1.88e-16 | 2 |
sebaceous gland | 1.88e-16 | 2 |
skin sebaceous gland | 1.88e-16 | 2 |
sweat gland | 1.88e-16 | 2 |
sweat gland placode | 1.88e-16 | 2 |
sebaceous gland placode | 1.88e-16 | 2 |
microcirculatory vessel | 5.16e-11 | 3 |
endothelium of capillary | 5.16e-11 | 3 |
capillary | 5.16e-11 | 3 |
penis | 2.04e-09 | 1 |
intromittent organ | 2.04e-09 | 1 |
lateral plate mesenchyme | 2.04e-09 | 1 |
undifferentiated genital tubercle | 2.04e-09 | 1 |
somatopleure | 2.04e-09 | 1 |
pulmonary valve | 3.88e-09 | 1 |
semi-lunar valve | 3.88e-09 | 1 |
uterus or analog | 4.19e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 2.40e-09 | 1 |