FFCP PHASE1:Hg19::chr22:30476215..30476223,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000429350_5end | |||
|cluster_id=chr22:30476215..30476223,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_ENST00000429350_5end | |||
|id=chr22:30476215..30476223,- | |||
|ontology_enrichment_celltype=CL:0000540!9.80e-15!6;CL:0000031!9.80e-15!6;CL:0000404!9.80e-15!6;CL:0002586!4.56e-12!3;CL:0002605!2.62e-11!3;CL:0002322!3.13e-11!5;CL:0000047!5.73e-11!8;CL:0000149!3.83e-09!4;CL:0002319!6.17e-09!25;CL:0000039!2.05e-08!7;CL:0000586!2.05e-08!7;CL:0000128!3.71e-08!7;CL:0000126!3.71e-08!7;CL:0000127!3.71e-08!7;CL:0002453!3.71e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0002586;1.14e-10;3!CL:0000182;1.81e-10;12!CL:0000149;2.52e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.09e-10,3;CL:0000182,1.77e-10,12;CL:0000149,2.43e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.57e-25!86;UBERON:0000073!1.79e-22!94;UBERON:0001016!1.79e-22!94;UBERON:0001017!4.97e-19!82;UBERON:0001049!3.16e-16!57;UBERON:0005068!3.16e-16!57;UBERON:0006241!3.16e-16!57;UBERON:0007135!3.16e-16!57;UBERON:0002020!8.91e-16!34;UBERON:0003528!8.91e-16!34;UBERON:0003075!6.89e-15!86;UBERON:0007284!6.89e-15!86;UBERON:0001869!1.97e-14!32;UBERON:0002346!5.50e-14!90;UBERON:0002616!1.01e-13!59;UBERON:0001893!1.93e-13!34;UBERON:0000955!1.76e-12!69;UBERON:0006238!1.76e-12!69;UBERON:0001781!4.56e-12!3;UBERON:0001782!4.56e-12!3;UBERON:0005424!4.56e-12!3;UBERON:0007023!6.64e-12!115;UBERON:0000966!6.91e-12!5;UBERON:0005388!6.91e-12!5;UBERON:0001802!6.91e-12!5;UBERON:0003056!7.02e-12!61;UBERON:0002791!7.56e-12!33;UBERON:0000956!3.30e-11!25;UBERON:0000203!3.30e-11!25;UBERON:0003135!4.62e-11!11;UBERON:0000473!5.73e-11!8;UBERON:0002780!1.00e-10!41;UBERON:0001890!1.00e-10!41;UBERON:0006240!1.00e-10!41;UBERON:0004121!1.84e-10!169;UBERON:0000988!2.04e-10!3;UBERON:0003080!2.07e-10!42;UBERON:0000924!4.58e-10!173;UBERON:0006601!4.58e-10!173;UBERON:0000153!6.27e-10!129;UBERON:0007811!6.27e-10!129;UBERON:0000033!1.09e-09!123;UBERON:0003101!6.47e-09!22;UBERON:0000079!6.47e-09!22;UBERON:0002148!1.28e-07!2;UBERON:0009662!1.28e-07!2;UBERON:0003076!1.80e-07!15;UBERON:0003057!1.80e-07!15;UBERON:0002298!8.31e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.38e-14;19!UBERON:0006925;3.38e-14;19!UBERON:0002423;5.75e-11;25!UBERON:0001781;1.14e-10;3!UBERON:0001782;1.14e-10;3!UBERON:0002365;2.97e-09;31!UBERON:0002330;2.97e-09;31!UBERON:0002368;3.64e-07;33!UBERON:0000966;6.58e-07;5!UBERON:0005388;6.58e-07;5!UBERON:0001802;6.58e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.31e-14,19;UBERON:0006925,3.31e-14,19;UBERON:0008836,3.31e-14,19;UBERON:0008835,2.26e-12,22;UBERON:0003894,2.26e-12,22;UBERON:0009854,7.25e-12,23;UBERON:0007499,5.65e-11,25;UBERON:0009497,5.65e-11,25;UBERON:0000015,5.65e-11,25;UBERON:0002423,5.65e-11,25;UBERON:0006235,5.65e-11,25;UBERON:0004161,5.65e-11,25;UBERON:0001782,1.09e-10,3;UBERON:0005424,1.09e-10,3;UBERON:0009856,1.40e-10,26;UBERON:0002365,5.54e-09,31;UBERON:0002330,5.54e-09,31;UBERON:0001781,2.43e-08,4;UBERON:0002368,4.96e-08,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0.136874425072884,0.251085279189606,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.348581828608555,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0.982827216677626,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28225062558195,0.656029291399411,0.976135183992909,3.09123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63602642174982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0.275078873194468,0.415440338029185,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22414914091781,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0.544017803369474,0.5013797880454,0,0,0,0,0.122026264901963,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0.0679697329768317,0.0657727735628491,0.354581522651905,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0.109265571963696,0,0.509944148709909,0.534434810531121,0.0918948995348449,1.25353769646188,0.151557396436479,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@ENST00000429350 | |||
}} |
Latest revision as of 20:02, 28 July 2015
Short description: | p3@ENST00000429350 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000429350_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000429350_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.09e-10 | 3 |
hepatocyte | 1.77e-10 | 12 |
visual pigment cell | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
liver | 3.31e-14 | 19 |
digestive gland | 3.31e-14 | 19 |
liver bud | 3.31e-14 | 19 |
hepatic diverticulum | 2.26e-12 | 22 |
liver primordium | 2.26e-12 | 22 |
digestive tract diverticulum | 7.25e-12 | 23 |
epithelial sac | 5.65e-11 | 25 |
epithelium of foregut-midgut junction | 5.65e-11 | 25 |
anatomical boundary | 5.65e-11 | 25 |
hepatobiliary system | 5.65e-11 | 25 |
foregut-midgut junction | 5.65e-11 | 25 |
septum transversum | 5.65e-11 | 25 |
pigmented layer of retina | 1.09e-10 | 3 |
presumptive retinal pigmented epithelium | 1.09e-10 | 3 |
sac | 1.40e-10 | 26 |
exocrine gland | 5.54e-09 | 31 |
exocrine system | 5.54e-09 | 31 |
layer of retina | 2.43e-08 | 4 |
endocrine gland | 4.96e-08 | 35 |