FFCP PHASE1:Hg19::chr22:26877821..26877834,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89781 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=15844 | |||
|TSSclassifier=strong | |||
|UniProt=Q6ICH6 | |||
|association_with_transcript=-4bp_to_CR456392_5end | |||
|cluster_id=chr22:26877821..26877834,- | |||
|coexpression_cluster_id=C96 | |||
|description=CAGE_peak_13_at_HPS4_5end | |||
|id=chr22:26877821..26877834,- | |||
|ontology_enrichment_celltype=CL:0002619!5.20e-09!3;CL:0000817!6.12e-09!3;CL:0002031!2.76e-07!124;CL:0000148!4.44e-07!10;CL:0000541!4.44e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000817;1.34e-23;1!CL:0000148;8.84e-10;10!CL:0002567;1.30e-08;3!CL:0000147;3.04e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,8.84e-10,10;CL:0000541,8.84e-10,10;CL:0000817,8.96e-09,3;CL:0002567,1.30e-08,3;CL:0000147,3.04e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.39e-20!34;UBERON:0003528!1.39e-20!34;UBERON:0001869!1.26e-19!32;UBERON:0002791!6.48e-19!33;UBERON:0001893!3.02e-18!34;UBERON:0002780!2.00e-16!41;UBERON:0001890!2.00e-16!41;UBERON:0006240!2.00e-16!41;UBERON:0003080!6.21e-16!42;UBERON:0000956!4.76e-15!25;UBERON:0000203!4.76e-15!25;UBERON:0001049!6.16e-15!57;UBERON:0005068!6.16e-15!57;UBERON:0006241!6.16e-15!57;UBERON:0007135!6.16e-15!57;UBERON:0002619!7.87e-15!22;UBERON:0002616!2.94e-14!59;UBERON:0001950!6.81e-14!20;UBERON:0007023!6.46e-13!115;UBERON:0000955!3.18e-11!69;UBERON:0006238!3.18e-11!69;UBERON:0003056!1.15e-09!61;UBERON:0002771!2.08e-09!3;UBERON:0001017!1.06e-08!82;UBERON:0001871!1.72e-08!7;UBERON:0003075!3.13e-08!86;UBERON:0007284!3.13e-08!86;UBERON:0005743!4.41e-08!86;UBERON:0000200!1.00e-07!6;UBERON:0002346!1.18e-07!90;UBERON:0002420!3.94e-07!9;UBERON:0007245!3.94e-07!9;UBERON:0010009!3.94e-07!9;UBERON:0010011!3.94e-07!9;UBERON:0000454!3.94e-07!9;UBERON:0002308!5.11e-07!9;UBERON:0000125!5.11e-07!9;UBERON:0000073!6.87e-07!94;UBERON:0001016!6.87e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.11e-17;20!UBERON:0002619;1.15e-15;22!UBERON:0000200;1.52e-15;6!UBERON:0000956;6.52e-14;25!UBERON:0000203;6.52e-14;25!UBERON:0002771;2.90e-12;2!UBERON:0002702;2.90e-12;2!UBERON:0003528;7.65e-09;34!UBERON:0002020;7.65e-09;34!UBERON:0001893;7.65e-09;34!UBERON:0002791;1.07e-08;32!UBERON:0001869;1.07e-08;32!UBERON:0001870;1.30e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,3.78e-17,20;UBERON:0002619,1.06e-15,22;UBERON:0000200,1.22e-15,6;UBERON:0000956,6.10e-14,25;UBERON:0000203,6.10e-14,25;UBERON:0002771,2.32e-12,2;UBERON:0002702,2.59e-12,2;UBERON:0002791,4.50e-11,32;UBERON:0001869,4.50e-11,32;UBERON:0003528,1.84e-10,34;UBERON:0002020,1.84e-10,34;UBERON:0001893,1.84e-10,34;UBERON:0002780,8.85e-09,41;UBERON:0001890,8.85e-09,41;UBERON:0003080,8.85e-09,41;UBERON:0006240,8.85e-09,41;UBERON:0001870,1.21e-08,3;UBERON:0000073,6.72e-07,53;UBERON:0002616,6.72e-07,53 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.305653622991805,0.656804715599566,0.472264687882075,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.953962497221368,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0.297262324577456,0,0,0,0,0,0,0.492663237895943,0,0,0.144119953416961,0.12624243342638,0.126995788584338,0,0,1.71072446022705,0.411309970813294,0.600686115687835,2.5724378936752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76088402822268,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0.307240764308458,1.3420566473545,0.500547425135725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0.802577647298789,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0.794305140223502,0,0,0,0.126621591911757,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.202210631562555,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,1.752673029891,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93561810612423,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0341369202707,0,0,0,0.0642292250964595,0,3.35231104020018,0,0,0.484100767249525,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65349437200947,0.507326481551255,0,0.548257766857182,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0,0,0.193766729508018,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p13@HPS4 | |||
}} |
Latest revision as of 12:46, 19 September 2015
Short description: | p13@HPS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_HPS4_5end |
Coexpression cluster: | C96_non_acute_tonsil_spleen_Burkitt_lymphoma_appendix |
Association with transcript: | -4bp_to_CR456392_5end |
EntrezGene: | HPS4 |
HGNC: | 15844 |
UniProt: | Q6ICH6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 8.84e-10 | 10 |
melanoblast | 8.84e-10 | 10 |
precursor B cell | 8.96e-09 | 3 |
light melanocyte | 1.30e-08 | 3 |
pigment cell | 3.04e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
neocortex | 3.78e-17 | 20 |
regional part of cerebral cortex | 1.06e-15 | 22 |
gyrus | 1.22e-15 | 6 |
cerebral cortex | 6.10e-14 | 25 |
pallium | 6.10e-14 | 25 |
middle temporal gyrus | 2.32e-12 | 2 |
middle frontal gyrus | 2.59e-12 | 2 |
regional part of telencephalon | 4.50e-11 | 32 |
cerebral hemisphere | 4.50e-11 | 32 |
brain grey matter | 1.84e-10 | 34 |
gray matter | 1.84e-10 | 34 |
telencephalon | 1.84e-10 | 34 |
regional part of forebrain | 8.85e-09 | 41 |
forebrain | 8.85e-09 | 41 |
anterior neural tube | 8.85e-09 | 41 |
future forebrain | 8.85e-09 | 41 |
frontal cortex | 1.21e-08 | 3 |
regional part of nervous system | 6.72e-07 | 53 |
regional part of brain | 6.72e-07 | 53 |