FFCP PHASE1:Hg19::chr21:46494466..46494543,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=104 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=226 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TCX7,G5E9B4,Q4AE81,F5H398,P78563,Q4AE77 | |||
|association_with_transcript=0bp_to_ENST00000327861,ENST00000348831,ENST00000389861,ENST00000389863,ENST00000437626,ENST00000460734,ENST00000492414,ENST00000496664,ENST00000539173,ENST00000539917,NM_001112,NM_001160230,NM_015833,NM_015834,NR_027672,NR_027673,NR_027674,uc002zgp.2,uc002zgq.2,uc002zgr.2,uc002zgs.2,uc002zgt.2,uc002zgu.2,uc002zgv.2,uc002zgw.2,uc002zgy.2,uc010gpx.2_5end | |||
|cluster_id=chr21:46494466..46494543,+ | |||
|description=CAGE_peak_1_at_ADARB1_5end | |||
|id=chr21:46494466..46494543,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.69e-12!115;UBERON:0003075!1.69e-09!86;UBERON:0007284!1.69e-09!86;UBERON:0002616!2.56e-09!59;UBERON:0002346!3.04e-09!90;UBERON:0000955!5.64e-09!69;UBERON:0006238!5.64e-09!69;UBERON:0003056!1.80e-07!61;UBERON:0001049!2.17e-07!57;UBERON:0005068!2.17e-07!57;UBERON:0006241!2.17e-07!57;UBERON:0007135!2.17e-07!57;UBERON:0001017!7.01e-07!82;UBERON:0000153!9.22e-07!129;UBERON:0007811!9.22e-07!129 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.23e-11,114;UBERON:0010371,7.74e-09,104;UBERON:0003075,9.27e-09,82;UBERON:0007284,9.27e-09,82;UBERON:0000955,1.01e-08,68;UBERON:0006238,1.01e-08,68;UBERON:0002346,1.62e-08,86;UBERON:0003056,2.61e-07,61;UBERON:0000073,2.96e-07,53;UBERON:0002616,2.96e-07,53;UBERON:0001049,3.83e-07,56;UBERON:0005068,3.83e-07,56;UBERON:0006241,3.83e-07,56;UBERON:0007135,3.83e-07,56 | |||
|phase1_expression=20.1663000990318,42.1778032065237,37.7757802977203,42.0307853083148,20.113249249228,28.7871712953122,12.6649939084155,0.631719873426831,16.19350894839,22.6075221581388,4.88460817580699,12.8880409556802,7.91300934685361,12.6241680019248,10.6047160232933,2.01697543935533,2.41077811209591,1.46062018077475,3.41552959153355,4.55547914884115,6.32402142857184,4.70182082217132,3.14859585844162,4.10623275218653,15.6928299493503,10.7742902104611,8.12795835554463,11.1769309465425,14.1611139665605,14.9693465257913,6.03782880932696,0.919421224478927,7.228942050678,1.47901604066715,1.70427841276664,1.27952309238679,2.05520307534393,11.0799081706375,5.81578897663411,4.77423915574874,3.13481663935894,2.91504299417082,3.34848237924443,2.76256653681173,1.51150377475524,1.94067248950253,4.64858073811369,5.34518254428373,3.40677007984614,5.46615545412086,4.86705342405291,3.78371567821736,5.17118521104928,4.51839278508678,4.06279459783025,4.1413314699373,5.18521685109907,3.82029923556644,3.97909060082173,6.73950956859797,5.75403413219137,2.63881040149373,4.78712778291916,3.83602275479425,3.48251086354301,9.64554881974938,3.11411124497787,5.27622197039161,4.17186334736161,2.38907729175628,5.44859552370032,4.41933163185078,3.79754864929061,0.211255286311942,1.27562579979026,0.628975936525128,2.69588714751588,2.4028302854641,2.57160938715328,2.28010194992999,3.58050018958362,1.82664153764634,33.4392864476513,24.0300988955338,22.2377313465889,18.7761297929263,23.2229672480887,32.7608890774055,21.8144808019005,26.7135051269902,30.1682873628008,16.4426413023863,17.5845684937605,2.64342657158052,6.72610275577843,3.16060901730092,15.9334913792205,11.0043013569766,16.8593229179598,3.17654341242288,6.51844533267181,5.6813736688168,0,4.34500781852177,6.77593587192126,5.09527957542329,11.6445661418957,5.63601806792971,8.45385759139208,6.41307827954337,8.84320056914715,4.92665245749589,11.5663519266407,9.09638815505025,13.589618094647,6.57194187645884,12.2630557952615,10.9960782554442,14.6751421371312,8.91983160107471,7.1619179924206,9.50452044448374,6.625305239422,7.16725022464743,13.742379920758,9.70786733380469,10.6746639599736,13.9108652825065,11.7673686144743,10.5721814834443,12.1903433156981,3.35350429851818,24.6774744358014,3.2529523714611,15.0401373190767,26.9414525267132,0.795285947051099,12.1658717575659,4.63220604103932,9.97782288581538,19.2358180667946,11.0022423418079,8.01449634243593,5.56176664176644,3.57002133020152,2.78607579678828,2.79211717089617,1.90792499444274,1.71598473234038,1.85728750664782,8.94430833150173,4.30117297553062,7.28995053375948,5.6530794192401,5.87299210693868,6.87795104850169,6.47884396264113,19.639673696869,14.2306505074684,15.7318687999395,7.25092770796465,6.0821768457481,17.0843440283719,2.57364156242108,4.86085168729056,10.1801690243851,11.0019392586823,11.3737595288155,9.19899824795299,5.69559395740877,8.06087673293792,11.8602375692457,3.87780264148325,11.3384453557059,16.4000744059455,4.93858995491861,2.78059279707759,4.30254931123221,2.12801029319014,7.8494864019923,4.2699598291882,4.44001587150888,5.29058760179603,8.75619368452972,3.43269996538263,32.995919226595,34.5705554687999,11.7160715916898,0.936480230490962,3.99330275081114,1.94283284717341,1.76151747965647,2.26622122115384,2.38766371393822,9.39109187772509,2.33385202892359,14.2589578022556,8.31602000097437,3.70900393917835,9.10161361938026,12.9351265526923,2.35670559535693,2.37725187756732,4.15596173226274,2.19488810440419,13.1789752193578,5.55880817954408,6.01190570748112,5.56107870635472,14.308345050844,29.6704661623387,9.00273288253207,8.03809728059823,13.1396675423271,14.517114793864,11.4767905924061,8.57445645418548,7.32057945307932,10.8618880397913,7.11242650002772,4.9701342952326,2.61955455391865,6.44330250779853,5.02478218224572,6.2731607735892,9.17774705244812,3.04934265323988,2.91565490307268,2.20768491452085,3.42081481550722,1.26160425437814,5.10968302706162,1.56449532329816,9.64861407289328,5.52539685409922,45.9724248751659,19.4907460050788,15.2615772051399,17.0270536978883,17.5938051814942,15.6617441279999,14.5979227541912,16.8462139568879,15.9100943628994,16.0901601402784,12.6966561792309,14.763109092493,18.231430594448,30.0449028271922,20.5812195939759,2.53510069643662,4.91413608338813,5.31710916013264,7.94633578946371,1.35287282397425,9.95093299731448,9.98727597218493,8.99214026060957,12.7671794962771,11.9439094254503,42.3550796903422,21.8386304908711,5.77325368101093,13.4479269771089,10.3319650927523,8.95071976118658,7.87075371380238,7.22965778491473,5.53143078571493,4.29243081047436,3.20082107913617,3.04205544681009,5.7966153292604,4.68669169933885,5.71139235876122,7.08875486211932,4.65704318054811,7.26584846284905,17.2522205624345,10.3459279958148,10.5658120815871,8.70778085271243,7.49423757768199,8.33200060614108,2.92090313743978,3.05590740446622,3.51652341630141,1.71072446022705,2.15937734676979,2.10240140490742,5.43070221998099,32.4058833758092,14.8226423403315,24.7150023216602,17.4516816273,35.76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| |||
|short_description=p1@ADARB1 | |||
}} |
Latest revision as of 20:25, 18 September 2015
Short description: | p1@ADARB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ADARB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000327861, ENST00000348831, ENST00000389861, ENST00000389863, ENST00000437626, ENST00000460734, ENST00000492414, ENST00000496664, ENST00000539173, ENST00000539917, NM_001112, NM_001160230, NM_015833, NM_015834, NR_027672, NR_027673, NR_027674, uc002zgp.2, uc002zgq.2, uc002zgr.2, uc002zgs.2, uc002zgt.2, uc002zgu.2, uc002zgv.2, uc002zgw.2, uc002zgy.2, uc010gpx.2_5end |
EntrezGene: | ADARB1 |
HGNC: | 226 |
UniProt: | Q8TCX7G5E9B4Q4AE81F5H398P78563Q4AE77 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.23e-11 | 114 |
ecto-epithelium | 7.74e-09 | 104 |
neural plate | 9.27e-09 | 82 |
presumptive neural plate | 9.27e-09 | 82 |
brain | 1.01e-08 | 68 |
future brain | 1.01e-08 | 68 |
neurectoderm | 1.62e-08 | 86 |
pre-chordal neural plate | 2.61e-07 | 61 |
regional part of nervous system | 2.96e-07 | 53 |
regional part of brain | 2.96e-07 | 53 |
neural tube | 3.83e-07 | 56 |
neural rod | 3.83e-07 | 56 |
future spinal cord | 3.83e-07 | 56 |
neural keel | 3.83e-07 | 56 |