FFCP PHASE1:Hg19::chr21:44375908..44375926,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr21:44375908..44375926,- | |||
|coexpression_cluster_id=C1735 | |||
|description=CAGE_peak_at_chr21:44375908..44375926,- | |||
|id=chr21:44375908..44375926,- | |||
|ontology_enrichment_celltype=CL:0002076!1.55e-12!43;CL:0000223!8.27e-12!59;CL:0002251!5.39e-10!21;CL:0002150!4.96e-09!3;CL:0000861!4.96e-09!3;CL:0000066!8.93e-07!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.06e-15;1!UBERON:0007123;2.06e-12;5!UBERON:0007297;2.31e-08;2 | |||
|ontology_enrichment_disease=DOID:305!7.91e-16!106;DOID:0050687!2.31e-12!143;DOID:1749!5.98e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:0050619;9.98e-16;1!DOID:1357;9.98e-16;1!DOID:4074;2.31e-08;2!DOID:4905;2.31e-08;2!DOID:3498;2.31e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,9.99e-16,1;DOID:1357,9.99e-16,1;DOID:4074,2.00e-08,2;DOID:4905,2.00e-08,2;DOID:3498,2.00e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.39e-17!169;UBERON:0000925!2.39e-17!169;UBERON:0006595!2.39e-17!169;UBERON:0001007!2.10e-16!155;UBERON:0001555!2.10e-16!155;UBERON:0007026!2.10e-16!155;UBERON:0000077!1.78e-14!130;UBERON:0004921!2.68e-14!129;UBERON:0004185!2.68e-14!129;UBERON:0001004!9.10e-14!72;UBERON:0003408!7.87e-12!10;UBERON:0001041!1.32e-11!98;UBERON:0001044!4.65e-11!6;UBERON:0003293!4.65e-11!6;UBERON:0003294!4.65e-11!6;UBERON:0010047!4.65e-11!6;UBERON:0000167!4.65e-11!6;UBERON:0000161!8.03e-11!35;UBERON:0000166!3.50e-10!21;UBERON:0006947!1.78e-09!3;UBERON:0004054!1.78e-09!3;UBERON:0005911!3.69e-09!82;UBERON:0000464!2.30e-07!104;UBERON:0002530!2.70e-07!59;UBERON:0005904!3.57e-07!4;UBERON:0000165!3.97e-07!28;UBERON:0000930!3.97e-07!28;UBERON:0004175!3.99e-07!25;UBERON:0000466!4.05e-07!126;UBERON:0000065!6.15e-07!53;UBERON:0003929!6.43e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;5.11e-20;3!UBERON:0004054;5.11e-20;3!UBERON:0001000;6.93e-16;1!UBERON:0005352;6.93e-16;1!UBERON:0001764;9.98e-16;1!UBERON:0001825;9.98e-16;1!UBERON:0001301;2.06e-15;1!UBERON:0005904;2.85e-15;4!UBERON:0002046;2.06e-12;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.32e-20,3;UBERON:0004054,3.32e-20,3;UBERON:0001000,5.56e-16,1;UBERON:0005352,5.56e-16,1;UBERON:0001764,9.99e-16,1;UBERON:0001825,9.99e-16,1;UBERON:0001301,1.34e-15,1;UBERON:0005904,2.07e-15,4;UBERON:0002046,2.82e-12,5;UBERON:0004117,2.82e-12,5;UBERON:0007689,2.82e-12,5;UBERON:0007123,2.82e-12,5;UBERON:0003091,2.82e-12,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0.23056390438806,0,0.760531603454056,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,1.56531695145672,0,3.94584402849391,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0,1.7472666824203,0,0.387025325156341,1.09633975629278,0.821154570532092,0,0,0.677942222341597,0,0,0,0.586654148204409,0,0,0.19980960958213,0.864542502924636,0,0,0.14405479798815,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0.446342914883745,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,2.66991963625398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0.11796972334774,0,0,0,0,0,0,0,3.12605604493237,0.261906694481422,0,0.295712172434091,0,0,0,0,0,0.548257766857182,0,0,0.255524855279191,0,0,0,0.455324382702595,1.86274977341542,0,0,0,0,0.118193840883968,0.222462803784138,1.17739639275771,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,3.44181887056222,0,0,0.846774100381858,0.68732060563215,0,0,0.559277158988962,0,0,0,0,0,0,0,0,0,0.22589216407792,0,0.301925687133347,0.0771741581079447,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0.178553938605658,0.352894871715692,1.44434460040503,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.952257725854961,0.0645889098360061,0.31037357147929,0,3.05506359735192,1.0105859447911,0,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | |||
|short_description=p@chr21:44375908..44375926,- | |||
}} |
Latest revision as of 18:14, 28 July 2015
Short description: | p@chr21:44375908..44375926, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:44375908..44375926, - |
Coexpression cluster: | C1735_thyroid_pancreas_ductus_salivary_seminal_parotid_placenta |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 3.32e-20 | 3 |
internal male genitalia | 3.32e-20 | 3 |
vas deferens | 5.56e-16 | 1 |
spermatic cord | 5.56e-16 | 1 |
maxillary sinus | 9.99e-16 | 1 |
paranasal sinus | 9.99e-16 | 1 |
epididymis | 1.34e-15 | 1 |
duct of male reproductive system | 2.07e-15 | 4 |
thyroid gland | 2.82e-12 | 5 |
pharyngeal pouch | 2.82e-12 | 5 |
thyroid diverticulum | 2.82e-12 | 5 |
pharyngeal pouch 2 | 2.82e-12 | 5 |
thyroid primordium | 2.82e-12 | 5 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 9.99e-16 | 1 |
maxillary sinus cancer | 9.99e-16 | 1 |
pancreas adenocarcinoma | 2.00e-08 | 2 |
pancreatic carcinoma | 2.00e-08 | 2 |
pancreatic ductal adenocarcinoma | 2.00e-08 | 2 |