FFCP PHASE1:Hg19::chr21:35895999..35896011,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1827 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3040 | |||
|TSSclassifier=strong | |||
|UniProt=P53805 | |||
|association_with_transcript=0bp_to_CR456878_5end | |||
|cluster_id=chr21:35895999..35896011,- | |||
|description=CAGE_peak_7_at_RCAN1_5end | |||
|id=chr21:35895999..35896011,- | |||
|ontology_enrichment_celltype=CL:0000055!7.03e-09!180 | |||
|ontology_enrichment_celltype_v019=CL:0002579;6.34e-15;3!CL:0002334;2.12e-13;12!CL:0000153;2.13e-08;9!CL:0000447;2.13e-08;9!CL:0000138;2.13e-07;6!CL:0002539;2.27e-07;10!CL:0002615;4.48e-07;3!CL:0002580;4.48e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,1.19e-14,3;CL:0002334,1.85e-13,12;CL:0000153,2.92e-08,9;CL:0000447,2.92e-08,9;CL:0002539,1.45e-07,10;CL:0002580,2.81e-07,3;CL:0000058,2.84e-07,6;CL:0000138,2.84e-07,6;CL:0002615,6.55e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;2.26e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.21e-10,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.90e-19;6!UBERON:0002358;1.90e-19;6!UBERON:0003684;1.90e-19;6!UBERON:0001178;1.90e-19;6!UBERON:0004457;2.42e-18;9!UBERON:0000042;2.42e-18;9!UBERON:0005406;8.28e-10;2!UBERON:0004237;2.27e-07;10!UBERON:0004695;2.27e-07;10!UBERON:0002111;2.27e-07;10!UBERON:0004178;2.27e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.15e-19,6;UBERON:0002358,5.15e-19,6;UBERON:0003684,5.15e-19,6;UBERON:0001178,5.15e-19,6;UBERON:0004457,2.57e-13,12;UBERON:0000042,2.57e-13,12;UBERON:0005406,4.42e-10,2;UBERON:0004237,1.45e-07,10;UBERON:0004695,1.45e-07,10;UBERON:0002111,1.45e-07,10;UBERON:0004178,1.45e-07,10 | |||
|phase1_expression=0.54503513781167,1.49870366723688,1.12763523276777,2.00146596706261,0.446961094427288,1.74467704820074,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,1.80808358407193,1.46062018077475,2.43966399395253,0,0.204000691244253,0.313454721478088,0.286235987131057,0.410623275218653,0.125542639594803,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0.369754010166788,0,0,0,0.553995408531877,0,0,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0.309706370895104,0.28769239232215,0,0,0.344745680736619,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0.502497330513487,0.521482918420201,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0.39783335439818,0,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0.552700035571697,0,0.14828656316206,0,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,1.00267582127178,3.47631645505977,0,1.45990461090791,0.472674085820339,0,0.087834785693126,0.130979075497713,0,0.370784442784429,0.324547393654683,0,0.398873881556595,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0,1.98788780678127,0.379891534993739,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0.576175924479999,0,0,0.570471821544449,0.149448680551801,0.469737994575059,0.485618833104395,0,0,0.368502951935304,0.103325781175765,0,0.741800787835671,0,0,0,0.250237039743928,0,0,0.612975591598039,0.901428353439581,0.113432183160021,0.538168907066586,0.427114777637135,0.847727604638247,0,0.103052529238439,0.515281080091258,1.11670113798954,0.675105328965065,0.292311015483596,0.252433774244115,0.828449087780694,0.161646056818812,0,0.604512589365842,0.339121184620975,0,0.272746120590835,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,1.38134921352481,0.928735856063958,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0.201057944823262,0,0,0,0,0.231860809950154,0.117408694235822,0,0.925971025153221,0.761016608938393,0,0,0,0.468008530278475,0.148631162288728,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0.126995788584338,0.381988425558278,0,0,1.02827492703324,1.20137223137567,0.571652865261156,0,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0.602878754119172,0,1.19967589418468,0,0.502257091432126,0,0.718874566474748,0,0,0.579125226670317,0.205476322550383,0,0,0,0,0,0,0,0,0.167516265334349,2.55175500661265,0,0,0,0,0,0,0.207970861530807,1.24900292158013,0.157702415033935,0.117141414992713,0,0,1.03473071292505,0,0.553107505625109,0.173767228936166,0,0,0,0,0,0,0,0,2.48107807818777,0.153461973288062,1.96462066103151,5.12556597022804,1.02341449813341,4.98647155545183,1.48418066444991,0.154209693802656,0.177561725313127,0,0,0.232420756919918,0.120859449591622,0.200506470303285,0.276242966807689,0.114814448164607,0.546273504020151,0.524497659837696,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.165018999841176,0,0,1.6068392984416,0.096670718292122,0.308097234229289,0.307007349452259,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,0.495854746082934,0.192190067365106,0,0.30347334256665,1.85938219718914,0.62962469366128,0,0,0,0.869932992075073,0.37064843820784,0,0.372158369359667,0,0.571890581771475,0,0,0,0,0.359744915166629,0.823611089208164,0.235624804691373,0.202182481573316,0,0.421258456238981,0,0.487426979262569,0,0.136499911407986,0.424216295861138,0,0.551365343546124,0,0.876901770507525,0,0,0.405820753925408,0.30982349809975,0.281695602532241,0,0.196498082026242,0.35667105148125,0.354761064070598,2.11107635297664,0.987884678879706,0,0,0.192444225451024,0,0,0.282431402330337,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0.223676107892416,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0.281338832821026,0,0,0.63337622438398,0.19924798825107,0.552567831062295,0,0.306806047506464,0,1.24415835064723,0.269605053441981,0,0,0.0986434056369336,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0,1.89110145414349,0,0,0,0,0.120596438625408,0,0.221158519862449,0.295547618953547,0.438770794307945,0,0,0.307801034015188,0.227884111694002,0,0.269272933229316,0.108647371922008,0.31900115973192,0.457987967009312,2.13213910407454,0,0,0,0,0,0,0.189753732724185,0,0.421996129056054,0.163232808159148,0.141353071433941,0,0.995261931078505,0,0.611030144933625,0,0,0,0.202203398942031,0.802577647298789,0.234264445725339,0.182454789215666,0,1.21390189767046,0,1.20990716048664,0,0,0,0.103688191397247,0,0.661983911750998,0,0,0.284609546029793,0.138674673013139,0.173559738335131,0,0,0.17472666824203,0.171986032471617,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0.0633107959558787,0,0.160317640503067,0,0.19980960958213,0.144090417154106,0,0,0.144054797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| |||
|short_description=p7@RCAN1 | |||
}} |
Latest revision as of 06:05, 18 September 2015
Short description: | p7@RCAN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RCAN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_CR456878_5end |
EntrezGene: | RCAN1 |
HGNC: | 3040 |
UniProt: | P53805 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 1.19e-14 | 3 |
preadipocyte | 1.85e-13 | 12 |
GAG secreting cell | 2.92e-08 | 9 |
carbohydrate secreting cell | 2.92e-08 | 9 |
aortic smooth muscle cell | 1.45e-07 | 10 |
preadipocyte of the breast | 2.81e-07 | 3 |
chondroblast | 2.84e-07 | 6 |
chondrocyte | 2.84e-07 | 6 |
adipocyte of omentum tissue | 6.55e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 5.15e-19 | 6 |
peritoneum | 5.15e-19 | 6 |
abdominal cavity | 5.15e-19 | 6 |
visceral peritoneum | 5.15e-19 | 6 |
cavity lining | 2.57e-13 | 12 |
serous membrane | 2.57e-13 | 12 |
perirenal fat | 4.42e-10 | 2 |
blood vessel smooth muscle | 1.45e-07 | 10 |
arterial system smooth muscle | 1.45e-07 | 10 |
artery smooth muscle tissue | 1.45e-07 | 10 |
aorta smooth muscle tissue | 1.45e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.21e-10 | 2 |