FFCP PHASE1:Hg19::chr21:35014751..35014767,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6453 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6183 | |||
|TSSclassifier=strong | |||
|UniProt=Q15811,C9J1A4 | |||
|association_with_transcript=0bp_to_ENST00000381318,ENST00000444491,ENST00000470742_5end | |||
|cluster_id=chr21:35014751..35014767,+ | |||
|description=CAGE_peak_3_at_ITSN1_5end | |||
|id=chr21:35014751..35014767,+ | |||
|ontology_enrichment_celltype=CL:0000222!6.77e-09!119;CL:0000213!2.26e-08!57;CL:0000215!2.26e-08!57;CL:0002321!1.15e-07!248;CL:0000220!3.05e-07!246 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.79e-08,121;CL:0000213,1.29e-07,58;CL:0000215,1.29e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.67e-18!659;UBERON:0000467!3.86e-16!625;UBERON:0000480!8.36e-16!626;UBERON:0000922!1.23e-14!612;UBERON:0000923!7.36e-13!604;UBERON:0005291!7.36e-13!604;UBERON:0006598!7.36e-13!604;UBERON:0002532!7.36e-13!604;UBERON:0002050!1.02e-12!605;UBERON:0005423!1.02e-12!605;UBERON:0000477!7.57e-12!286;UBERON:0000062!1.01e-11!511;UBERON:0000119!1.31e-11!312;UBERON:0004111!3.04e-11!241;UBERON:0000483!3.76e-11!309;UBERON:0000025!1.31e-10!194;UBERON:0003075!7.03e-09!86;UBERON:0007284!7.03e-09!86;UBERON:0000481!2.35e-08!347;UBERON:0002346!2.69e-08!90;UBERON:0004872!1.42e-07!84;UBERON:0001017!1.71e-07!82;UBERON:0001049!5.02e-07!57;UBERON:0005068!5.02e-07!57;UBERON:0006241!5.02e-07!57;UBERON:0007135!5.02e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,8.49e-11,192;UBERON:0004111,8.68e-10,240;UBERON:0000922,1.55e-09,592;UBERON:0010314,5.03e-09,132;UBERON:0000119,6.43e-09,309;UBERON:0000923,1.02e-08,560;UBERON:0010316,1.02e-08,560;UBERON:0005291,1.02e-08,560;UBERON:0006598,1.02e-08,560;UBERON:0010317,1.02e-08,560;UBERON:0002532,1.02e-08,560;UBERON:0002050,1.09e-08,564;UBERON:0000483,1.41e-08,306;UBERON:0005423,2.69e-08,581;UBERON:0004872,3.02e-08,83;UBERON:0003075,1.32e-07,82;UBERON:0007284,1.32e-07,82;UBERON:0003914,6.20e-07,117;UBERON:0001017,6.41e-07,81 | |||
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| |||
|short_description=p3@ITSN1 | |||
}} |
Latest revision as of 04:58, 18 September 2015
Short description: | p3@ITSN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ITSN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000381318, ENST00000444491, ENST00000470742_5end |
EntrezGene: | ITSN1 |
HGNC: | 6183 |
UniProt: | Q15811C9J1A4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.79e-08 | 121 |
lining cell | 1.29e-07 | 58 |
barrier cell | 1.29e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
tube | 8.49e-11 | 192 |
anatomical conduit | 8.68e-10 | 240 |
embryo | 1.55e-09 | 592 |
structure with developmental contribution from neural crest | 5.03e-09 | 132 |
cell layer | 6.43e-09 | 309 |
germ layer | 1.02e-08 | 560 |
germ layer / neural crest | 1.02e-08 | 560 |
embryonic tissue | 1.02e-08 | 560 |
presumptive structure | 1.02e-08 | 560 |
germ layer / neural crest derived structure | 1.02e-08 | 560 |
epiblast (generic) | 1.02e-08 | 560 |
embryonic structure | 1.09e-08 | 564 |
epithelium | 1.41e-08 | 306 |
developing anatomical structure | 2.69e-08 | 581 |
splanchnic layer of lateral plate mesoderm | 3.02e-08 | 83 |
neural plate | 1.32e-07 | 82 |
presumptive neural plate | 1.32e-07 | 82 |
epithelial tube | 6.20e-07 | 117 |
central nervous system | 6.41e-07 | 81 |