FFCP PHASE1:Hg19::chr21:28339400..28339416,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11096 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=221 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UNA0 | |||
|association_with_transcript=22bp_to_NM_007038,uc002ymg.2_5end | |||
|cluster_id=chr21:28339400..28339416,- | |||
|description=CAGE_peak_1_at_ADAMTS5_5end | |||
|id=chr21:28339400..28339416,- | |||
|ontology_enrichment_celltype=CL:0000055!3.23e-13!180;CL:0000057!1.51e-09!75;CL:0000136!5.46e-09!15;CL:0002620!6.87e-08!23;CL:0000680!7.28e-07!57;CL:0000056!7.28e-07!57;CL:0000355!7.28e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.24e-08;13!CL:0000134;8.55e-08;55!CL:0002620;1.32e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.12e-09,15;CL:0000057,1.62e-09,76;CL:0002620,1.31e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.09e-10!83;UBERON:0002329!2.09e-10!83;UBERON:0003077!2.09e-10!83;UBERON:0003059!2.09e-10!83;UBERON:0007282!2.09e-10!83;UBERON:0009618!2.09e-10!83;UBERON:0007285!2.09e-10!83;UBERON:0000468!4.09e-10!659;UBERON:0004290!5.29e-09!70;UBERON:0005256!1.40e-08!143;UBERON:0002385!1.65e-08!63;UBERON:0001015!1.65e-08!63;UBERON:0000383!1.65e-08!63;UBERON:0001134!3.80e-08!61;UBERON:0002036!3.80e-08!61;UBERON:0003082!3.80e-08!61;UBERON:0000486!1.10e-07!82;UBERON:0000467!2.12e-07!625;UBERON:0002199!2.97e-07!45;UBERON:0002416!2.97e-07!45;UBERON:0000480!3.29e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;5.61e-07;31!UBERON:0001015;5.61e-07;31!UBERON:0000383;5.61e-07;31!UBERON:0001134;7.88e-07;16!UBERON:0002036;7.88e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,3.30e-08,160;UBERON:0009142,3.30e-08,160;UBERON:0002329,4.65e-08,71;UBERON:0003059,4.65e-08,71;UBERON:0007282,4.65e-08,71;UBERON:0004290,4.65e-08,71;UBERON:0009618,4.65e-08,71;UBERON:0002385,5.06e-08,64;UBERON:0001015,5.06e-08,64;UBERON:0000383,5.06e-08,64;UBERON:0007524,7.35e-08,73;UBERON:0007503,9.19e-08,78;UBERON:0003077,1.06e-07,72;UBERON:0007285,1.06e-07,72;UBERON:0001134,1.21e-07,62;UBERON:0002036,1.21e-07,62;UBERON:0003082,1.21e-07,62;UBERON:0002199,3.78e-07,46;UBERON:0002416,3.78e-07,46;UBERON:0000486,5.67e-07,83;UBERON:0003102,9.17e-07,99 | |||
|phase1_expression=116.092484353886,81.3581990785736,145.746853835234,52.0381151436278,83.1347635634755,24.4254786748103,12.6649939084155,44.852111013305,84.6241435367477,0.245733936501509,0.697801167972428,0,0,29.085092945611,30.1571611912403,2.6893005858071,1.20538905604795,0,0.487932798790507,0.123121058076788,1.63200552995402,1.25381888591235,0,0,0.251085279189606,0,0,0,1.18009283054671,0.767658796194425,1.70297735647684,0,0,0,0,0,0,2.76997704265939,5.41470008169383,3.47217393145363,0,0,0,0.872389432677388,2.26725566213286,0.485168122375632,1.39457422143411,1.6446715520873,1.85823822537062,0.575384784644301,3.58624989140741,2.12834006899727,5.5159308917859,3.22742341791913,0,1.88242339542605,1.09162460023138,0.449446968890169,2.14258724659632,5.1348644332175,5.11469700639233,1.31940520074686,2.59302754908121,1.70489900213078,2.61188314765726,0.56738522469114,1.24564449799115,3.26623264833766,6.77927793946262,3.9093992046921,4.23779651843358,1.47311054395026,1.26584954976354,0,0.212604299965044,0.209658645508376,5.39177429503177,1.95229960693958,8.19700492155109,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0,26.8187552945358,0.670700859703636,2.42938867502708,305.416083764959,212.567274109617,342.562017342348,61.2370179229346,140.150842647159,0.283604451492204,0.665188192387692,0.614843499851882,10.6093051153147,0,0,0,0.348259474598534,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0.366403487860815,0,0,0,19.3819061161174,3.92554586160197,114.533941403434,46.180695940559,7.4480360261655,17.9416832045538,0,14.5533853566124,12.4484414159907,0.134710672069688,0,0.302714855289863,0,0,14.6715236110251,7.98660550162229,8.81747215255626,0.939475989150119,0.323745888736263,0.280901613404497,2.44985005505872,0.491337269247072,13.4323515528495,67.7161628650771,54.6459913705611,11.8320977051943,2.15585442544872,1.34668891163253,1.7516592782075,6.92660288710457,46.5316278133688,16.243853177348,65.0530795065564,0,53.9962803423474,197.967699434812,95.5812874229624,31.5095650888622,58.4307840781949,103.313856558297,108.320010384985,33.2489374515295,19.4874010322397,51.7489237200435,213.647814748777,69.8310965457267,161.52936459506,56.4211750074786,5.08681776931463,0,1.09098448236334,0.286804595389004,0,0,0.116193942869518,1.14027160516907,0.252320850875628,0.36497735907583,46.9348596989448,74.6159488303747,22.1015874163969,183.425331572632,59.9159969785756,5.08719240171329,6.57480291304597,6.7483088367375,4.96322877295773,5.88274499049497,5.45722423955522,5.52808363456674,5.49420102350969,2.69323009862473,0,4.20725321410337,16.0513864419246,19.1111324801205,2.53510069643662,0,5.31710916013264,0,0,0.171567810298526,0.439001141634502,0,0.100528972411631,0,0,0,1.44331342025273,0.115930404975077,11.5060520351105,0,0.462985512576611,0,0,0.858486162094873,0,0,0.148631162288728,0,113.219954406031,1.98485136139341,0.358234090811393,0,0,0.492663237895943,0,1.03664057770386,0.432359860250884,0.12624243342638,0,0,0,8.55362230113526,0.102827492703324,0,0,0.672786506072164,0.87192013766656,0.8800594298514,24.5616259939778,178.828222925941,6.762422020448,126.320605377813,239.217104896142,5.91576960802927,1.41849132023278,5.32844358032199,36.3164103891695,10.8524321078289,0.823240336780769,1.30294473717494,18.1249893858698,4.75171123760058,3.31583314765545,31.3752045096106,2.19940580600526,0,0,0,41.6947248555354,366.409575310823,48.4965477138443,44.1582985336117,17.8764400618834,98.6625907451825,0,0,0,0.256686072559497,0.254094624222463,9.10978977003352,0.773288812777695,1.84267891867784,1.91381625495949,0,0,0,48.7085222124985,67.0228498219967,5.15403545029498,157.22597131729,182.354426550699,275.979226309386,88.6760511494839,16.5520354850245,6.82222512167955,12.4167685551006,1.32845119707087,8.66535092146005,5.90808578382963,0.391602314925481,14.0688803762451,0.82707210449155,0.862856803274467,1.06727557803444,0.303127571446259,0,3.62868351995616,74.4323423456331,14.4254254890779,65.6744620973392,104.305267494141,49.6356031594702,44.7173900779229,25.2310712956485,2.62156479464514,7.99027763909072,11.4156746859195,2.07701771673448,18.0126086612937,0,4.21063587636898,0,30.65545765995,16.3882051206045,35.4035920390445,8.57279264524082,10.8591625317225,8.62784746094541,16.0753147118587,14.6716764161097,1.13733384070897,0,6.26156156696204,1.54227252690289,10.2959646266664,20.569280728049,0.509752546090077,0.831076008928724,10.2982387172202,0,0,0.512900250232778,23.2890398446791,1.62689197332152,12.6740444326698,15.7499479487551,9.65361149070879,6.3169209179579,0,3.21367859688319,8.60369392799886,11.0915004322544,14.1223380748039,7.58101148664918,19.0133833416844,10.151168573996,18.9203112863744,25.9083223732006,0.330569830721956,0.384380134730212,1.14851441245126,0.10115778085555,0.464845549297286,20.147990197161,4.8792608911242,84.7092345484244,3.19383618190213,7.829396928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| |||
|short_description=p1@ADAMTS5 | |||
}} |
Latest revision as of 23:56, 17 September 2015
Short description: | p1@ADAMTS5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ADAMTS5_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_NM_007038, uc002ymg.2_5end |
EntrezGene: | ADAMTS5 |
HGNC: | 221 |
UniProt: | Q9UNA0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.12e-09 | 15 |
fibroblast | 1.62e-09 | 76 |
skin fibroblast | 1.31e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 3.30e-08 | 160 |
entire embryonic mesenchyme | 3.30e-08 | 160 |
somite | 4.65e-08 | 71 |
presomitic mesoderm | 4.65e-08 | 71 |
presumptive segmental plate | 4.65e-08 | 71 |
dermomyotome | 4.65e-08 | 71 |
trunk paraxial mesoderm | 4.65e-08 | 71 |
muscle tissue | 5.06e-08 | 64 |
musculature | 5.06e-08 | 64 |
musculature of body | 5.06e-08 | 64 |
dense mesenchyme tissue | 7.35e-08 | 73 |
epithelial vesicle | 9.19e-08 | 78 |
paraxial mesoderm | 1.06e-07 | 72 |
presumptive paraxial mesoderm | 1.06e-07 | 72 |
skeletal muscle tissue | 1.21e-07 | 62 |
striated muscle tissue | 1.21e-07 | 62 |
myotome | 1.21e-07 | 62 |
integument | 3.78e-07 | 46 |
integumental system | 3.78e-07 | 46 |
multilaminar epithelium | 5.67e-07 | 83 |
surface structure | 9.17e-07 | 99 |