FFCP PHASE1:Hg19::chr21:27107672..27107698,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2551 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4071 | |||
|TSSclassifier=strong | |||
|UniProt=Q06546 | |||
|association_with_transcript=0bp_to_ENST00000400075_5end | |||
|cluster_id=chr21:27107672..27107698,+ | |||
|description=CAGE_peak_2_at_GABPA_5end | |||
|id=chr21:27107672..27107698,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.59e-30!140;CL:0000037!2.19e-27!172;CL:0000566!2.19e-27!172;CL:0002032!1.27e-25!165;CL:0000837!1.27e-25!165;CL:0002031!1.70e-25!124;CL:0002087!1.02e-24!119;CL:0000988!7.96e-23!182;CL:0000766!9.99e-18!76;CL:0000557!5.69e-16!71;CL:0000763!1.88e-15!112;CL:0000049!1.88e-15!112;CL:0000839!3.22e-15!70;CL:0002057!8.79e-15!42;CL:0002009!1.71e-14!65;CL:0002194!6.75e-14!63;CL:0000576!6.75e-14!63;CL:0000040!6.75e-14!63;CL:0000559!6.75e-14!63;CL:0000860!9.27e-14!45;CL:0000542!7.22e-10!53;CL:0000051!7.22e-10!53;CL:0000838!7.77e-10!52;CL:0000791!6.85e-07!18;CL:0000789!6.85e-07!18;CL:0002420!6.85e-07!18;CL:0002419!6.85e-07!18;CL:0000790!6.85e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000576;2.35e-10;48!CL:0000860;2.70e-10;33!CL:0002057;2.70e-10;33!CL:0000473;5.94e-09;39!CL:0000234;5.94e-09;39!CL:0000766;9.16e-09;69!CL:0002087;9.50e-09;104!CL:0000738;2.09e-07;136!CL:0000791;5.63e-07;18!CL:0000789;5.63e-07;18!CL:0002419;5.63e-07;18!CL:0000542;8.82e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.21e-31,136;CL:0000037,3.30e-28,168;CL:0002031,1.15e-26,120;CL:0002032,1.99e-26,161;CL:0000837,1.99e-26,161;CL:0002087,6.73e-26,115;CL:0000988,4.40e-24,177;CL:0000766,5.61e-19,72;CL:0000557,3.51e-17,67;CL:0000839,2.17e-16,66;CL:0000763,3.84e-16,108;CL:0000049,3.84e-16,108;CL:0002009,1.08e-15,61;CL:0002194,4.40e-15,59;CL:0000576,4.40e-15,59;CL:0000040,4.40e-15,59;CL:0000559,4.40e-15,59;CL:0000860,8.42e-15,42;CL:0002057,8.42e-15,42;CL:0000473,2.00e-14,48;CL:0000234,2.00e-14,48;CL:0000542,6.25e-10,53;CL:0000051,6.25e-10,53;CL:0000838,6.73e-10,52;CL:0000791,6.73e-07,18;CL:0000789,6.73e-07,18;CL:0002420,6.73e-07,18;CL:0002419,6.73e-07,18;CL:0000790,6.73e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;4.53e-11;42!CL:0000790;5.63e-07;18!CL:0000051;8.82e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.96e-19!115;UBERON:0002390!1.15e-17!102;UBERON:0003061!1.15e-17!102;UBERON:0002193!1.20e-14!112;UBERON:0002371!6.03e-13!80;UBERON:0001474!1.26e-12!86;UBERON:0004765!1.62e-11!101;UBERON:0001434!1.62e-11!101;UBERON:0002405!3.54e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.41e-19,114;UBERON:0002390,1.39e-18,98;UBERON:0003061,1.39e-18,98;UBERON:0002193,1.99e-15,108;UBERON:0002371,8.33e-14,76;UBERON:0001474,2.05e-13,82;UBERON:0004765,1.56e-12,90;UBERON:0002405,1.66e-12,93;UBERON:0001434,4.65e-12,100 | |||
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| |||
|short_description=p2@GABPA | |||
}} |
Latest revision as of 22:26, 17 September 2015
Short description: | p2@GABPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GABPA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000400075_5end |
EntrezGene: | GABPA |
HGNC: | 4071 |
UniProt: | Q06546 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.41e-19 | 114 |
hematopoietic system | 1.39e-18 | 98 |
blood island | 1.39e-18 | 98 |
hemolymphoid system | 1.99e-15 | 108 |
bone marrow | 8.33e-14 | 76 |
bone element | 2.05e-13 | 82 |
skeletal element | 1.56e-12 | 90 |
immune system | 1.66e-12 | 93 |
skeletal system | 4.65e-12 | 100 |